Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 5.2e-85 317.8 171 100.0
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 2.3e-77 292.4 172 92.4
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 7.5e-76 287.3 174 91.4
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 4.0e-69 265.0 179 82.7
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 3.4e-68 261.9 176 83.0
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 3.4e-68 261.9 176 83.0
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 1.7e-67 259.6 179 81.0
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.9e-67 258.1 179 80.4
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.0e-64 248.1 176 79.0
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.0e-60 236.1 186 72.0
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 1.1e-58 230.3 176 75.6
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 7.1e-58 227.6 175 74.3
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 9.2e-58 227.3 177 72.9
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 5.1e-56 221.5 176 73.9
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 6.6e-56 221.1 178 73.0
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 1.5e-55 219.9 175 70.9
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 2.5e-55 219.2 179 69.8
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 7.3e-55 217.6 178 72.5
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 7.3e-55 217.6 182 70.3
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 1.2e-54 216.9 178 72.5
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 1.6e-54 216.5 179 69.8
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 2.8e-54 215.7 182 70.3
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 6.2e-54 214.5 179 70.9
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 6.2e-54 214.5 181 69.1
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.8e-53 213.0 186 66.7
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 3.1e-53 212.2 174 69.0
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 6.8e-53 211.1 174 69.0
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 8.9e-53 210.7 179 68.7
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 1.2e-52 210.3 178 69.7
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 1.2e-52 210.3 184 67.9
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 1.5e-52 209.9 176 70.5
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.0e-52 209.5 182 68.7
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 2.6e-52 209.1 167 70.1
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 3.4e-52 208.8 182 68.1
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.8e-52 208.0 178 66.9
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 7.6e-52 207.6 178 66.9
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 3.7e-51 205.3 178 67.4
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 3.7e-51 205.3 176 67.0
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 4.9e-51 204.9 186 66.1
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 1.4e-50 203.4 179 67.0
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 1.4e-50 203.4 177 69.5
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 1.4e-50 203.4 176 68.2
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 1.4e-50 203.4 174 69.0
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 1.9e-50 203.0 174 69.0
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 1.9e-50 203.0 173 68.8
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 4.1e-50 201.8 176 68.2
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 5.4e-50 201.4 181 65.2
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 9.2e-50 200.7 175 67.4
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 9.2e-50 200.7 182 67.0
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 9.2e-50 200.7 182 67.0
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 9.2e-50 200.7 182 65.4
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.6e-49 199.9 179 66.5
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 1.6e-49 199.9 180 64.4
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 2.7e-49 199.1 175 68.6
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 3.5e-49 198.7 178 63.5
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.6e-49 198.4 180 66.1
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 4.6e-49 198.4 180 66.1
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 1.0e-48 197.2 177 66.7
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.0e-48 197.2 181 64.6
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.3e-48 196.8 177 65.0
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.3e-48 196.8 174 68.4
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 1.7e-48 196.4 174 67.8
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 3.0e-48 195.7 178 64.0
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 3.9e-48 195.3 173 65.9
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.1e-48 194.9 173 65.9
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 5.1e-48 194.9 173 67.1
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 8.6e-48 194.1 186 62.4
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 1.1e-47 193.7 178 66.3
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 7.3e-47 191.0 172 66.3
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 9.6e-47 190.7 182 64.3
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 1.2e-46 190.3 177 63.8
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 2.8e-46 189.1 171 65.5
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 3.6e-46 188.7 180 63.9
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 3.6e-46 188.7 136 72.1
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 1.1e-45 187.2 176 62.5
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 1.1e-45 187.2 186 61.3
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 1.4e-45 186.8 183 61.7
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 1.4e-45 186.8 173 63.6
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.8e-45 186.4 184 60.9
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.8e-45 186.4 184 60.9
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 4.0e-45 185.3 162 67.9
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 6.8e-45 184.5 178 61.8
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 6.8e-45 184.5 115 81.7
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 8.9e-45 184.1 175 61.7
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 1.2e-44 183.7 177 62.1
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.2e-44 183.7 137 70.1
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 2.0e-44 183.0 170 62.9
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 2.0e-44 183.0 179 61.5
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 3.4e-44 182.2 179 61.5
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 3.4e-44 182.2 179 61.5
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 5.8e-44 181.4 171 62.6
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 5.8e-44 181.4 171 62.6
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 5.8e-44 181.4 151 67.5
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 1.3e-43 180.3 134 73.1
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.3e-43 180.3 177 61.0
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 2.9e-43 179.1 175 61.1
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 2.9e-43 179.1 176 61.9
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 4.9e-43 178.3 114 76.3
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 4.9e-43 178.3 183 59.6
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 6.4e-43 177.9 181 63.0
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 6.4e-43 177.9 176 61.4
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 6.4e-43 177.9 124 73.4
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 1.4e-42 176.8 166 63.3
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 1.9e-42 176.4 179 60.3
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 2.4e-42 176.0 137 70.8
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 3.2e-42 175.6 103 84.5
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 4.2e-42 175.3 176 60.2
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 5.4e-42 174.9 172 60.5
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.2e-41 173.7 175 60.6
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 2.1e-41 172.9 180 58.9
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.0e-40 170.6 184 57.6
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 2.3e-40 169.5 127 70.9
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 6.6e-40 167.9 181 58.0
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 1.9e-39 166.4 172 58.1
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 1.3e-35 153.7 110 69.1
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 2.7e-33 146.0 85 83.5
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.1e-30 136.3 143 60.1
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 2.4e-29 132.9 114 57.0
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 6.9e-29 131.3 148 56.1
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.5e-28 130.2 166 47.0
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 5.8e-28 128.3 131 53.4
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 9.9e-28 127.5 104 60.6
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 1.2e-25 120.6 115 53.0
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 1.1e-23 114.0 133 58.6
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 7.6e-20 101.3 140 45.0
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 4.2e-18 95.5 165 38.2
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 9.3e-18 94.4 141 46.1
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 8.7e-16 87.8 97 54.6
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 1.6e-06 57.0 98 30.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.6e-06 57.0 98 30.6
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 2.2e-06 56.6 98 29.6
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 2.2e-06 56.6 100 30.0
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.8e-06 56.2 100 29.0
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 6.3e-06 55.1 98 29.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 8.2e-06 54.7 98 29.6


User provided reference genes

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