Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G220100 Prunus persica HOM05D005864 ORTHO05D006770 2.6e-221 771.9 440 100.0
FvH4_6g43530 Fragaria vesca HOM05D005864 ORTHO05D006770 1.5e-115 420.6 434 57.6
MD09G1105200 Malus domestica HOM05D005864 ORTHO05D006770 1.4e-110 404.1 401 68.6
FAN14G4164 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.0e-109 400.2 453 54.1
CiPaw.04G117700 Carya illinoinensis HOM05D005864 ORTHO05D006770 4.1e-102 375.9 446 54.7
FAN05G0568 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.0e-101 373.6 434 53.5
FAN09G3055 Fragaria x ananassa HOM05D005864 ORTHO05D006770 3.0e-100 369.8 444 52.0
QL08p033779 Quercus lobata HOM05D005864 ORTHO05D006770 1.1e-97 361.3 449 53.9
CiPaw.03G162800 Carya illinoinensis HOM05D005864 ORTHO05D006770 4.9e-95 352.4 450 52.4
Dinv39688 Davidia involucrata HOM05D005864 ORTHO05D006770 2.4e-86 323.6 448 55.4
FAN02G2067 Fragaria x ananassa HOM05D005864 ORTHO05D006770 2.4e-86 323.6 394 52.0
Nn1g07000 Nelumbo nucifera HOM05D005864 ORTHO05D006770 1.5e-83 314.3 449 45.7
GSVIVG01030622001 Vitis vinifera HOM05D005864 ORTHO05D006770 1.4e-78 297.7 445 46.3
Lj3g0027429 Lotus japonicus HOM05D005864 ORTHO05D006770 2.4e-78 297.0 449 44.1
Hma1.2p1_0613F.1_g189160 Hydrangea macrophylla HOM05D005864 ORTHO05D006770 9.3e-78 295.0 448 46.4
Actinidia12503 Actinidia chinensis HOM05D005864 ORTHO05D006770 6.0e-77 292.4 445 51.5
Haze_12896 Corylus avellana HOM05D005864 ORTHO05D006770 7.8e-77 292.0 465 46.5
Atru.chr6.3147 Acer truncatum HOM05D005864 ORTHO05D006770 1.0e-76 291.6 447 45.2
VMungo1127G2082 Vigna mungo HOM05D005864 ORTHO05D006770 1.3e-76 291.2 443 50.8
Thecc.02G162100 Theobroma cacao HOM05D005864 ORTHO05D006770 2.3e-76 290.4 443 44.0
Glyma.12G101400 Glycine max HOM05D005864 ORTHO05D006770 2.5e-75 287.0 443 50.1
Lalb_Chr19g0135701 Lupinus albus HOM05D005864 ORTHO05D006770 1.6e-74 284.3 443 42.9
Glyma.06G306800 Glycine max HOM05D005864 ORTHO05D006770 3.6e-74 283.1 443 46.3
Cpa.g.sc8.234 Carica papaya HOM05D005864 ORTHO05D006770 4.8e-74 282.7 449 43.7
Duzib052G0164 Durio zibethinus HOM05D005864 ORTHO05D006770 8.1e-74 282.0 443 48.3
MELO3C018803.2 Cucumis melo HOM05D005864 ORTHO05D006770 9.9e-72 275.0 447 43.8
Phvul.011G106100 Phaseolus vulgaris HOM05D005864 ORTHO05D006770 2.2e-71 273.9 443 44.2
Potri.007G121700 Populus trichocarpa HOM05D005864 ORTHO05D006770 6.4e-71 272.3 445 43.4
TWI36G0516 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 9.3e-70 268.5 461 40.3
arahy.Tifrunner.gnm1.ann1.VAE2IM Arachis hypogaea HOM05D005864 ORTHO05D006770 1.3e-68 264.6 506 39.1
Medtr4g046697 Medicago truncatula HOM05D005864 ORTHO05D006770 3.0e-68 263.5 444 42.3
Sc21g0001650 Simmondsia chinensis HOM05D005864 ORTHO05D006770 1.5e-67 261.2 455 40.7
arahy.Tifrunner.gnm1.ann1.UG5YAZ Arachis hypogaea HOM05D005864 ORTHO05D006770 2.5e-67 260.4 513 38.8
Psat7g195480 Pisum sativum HOM05D005864 ORTHO05D006770 1.3e-66 258.1 444 41.2
Eucgr.K00811 Eucalyptus grandis HOM05D005864 ORTHO05D006770 2.4e-62 243.8 447 43.0
Gohir.D02G187200 Gossypium hirsutum HOM05D005864 ORTHO05D006770 2.1e-61 240.7 444 44.8
ClCG02G001780 Citrullus lanatus HOM05D005864 ORTHO05D006770 1.3e-60 238.0 506 38.1
Gohir.A03G163800 Gossypium hirsutum HOM05D005864 ORTHO05D006770 2.5e-59 233.8 445 43.1
Sed0020795 Sechium edule HOM05D005864 ORTHO05D006770 3.3e-59 233.4 442 45.7
CsaV3_7G003760 Cucumis sativus L. HOM05D005864 ORTHO05D006770 7.4e-59 232.3 444 39.2
Cc05_g05040 Coffea canephora HOM05D005864 ORTHO05D006770 2.8e-58 230.3 470 41.5
TWI75G1887 Tripterygium wilfordii HOM05D005864 ORTHO05D006770 2.8e-58 230.3 402 40.3
Manes.12G077600 Manihot esculenta HOM05D005864 ORTHO05D006770 1.8e-57 227.6 409 42.1
Ciclev10015598m.g Citrus clementina HOM05D005864 ORTHO05D006770 3.1e-57 226.9 433 47.8
SHI10272 Sapria himalayana HOM05D005864 ORTHO05D006770 2.6e-56 223.8 432 40.7
Dinv18530 Davidia involucrata HOM05D005864 ORTHO05D006770 3.4e-56 223.4 288 50.3
Solyc12g005770.3 Solanum lycopersicum HOM05D005864 ORTHO05D006770 1.0e-55 221.9 481 36.6
ATR0794G118 Amborella trichopoda HOM05D005864 ORTHO05D006770 2.9e-55 220.3 462 41.3
CAN.G80.20 Capsicum annuum HOM05D005864 ORTHO05D006770 1.9e-54 217.6 460 37.8
HPP92_002197 Vanilla planifolia HOM05D005864 ORTHO05D006770 3.2e-54 216.9 451 41.5
SalBow7G0586 Salvia bowleyana HOM05D005864 ORTHO05D006770 5.5e-54 216.1 447 36.9
Aqoxy4G02070 Aquilegia oxysepala HOM05D005864 ORTHO05D006770 9.3e-54 215.3 458 38.9
CDE05G3135 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 7.9e-53 212.2 452 36.1
PGR142G4274 Punica granatum HOM05D005864 ORTHO05D006770 1.0e-52 211.8 443 37.9
RcHm_v2.0_Chr2g0160051 Rosa chinensis HOM05D005864 ORTHO05D006770 1.0e-52 211.8 214 57.5
Eucgr.K00844 Eucalyptus grandis HOM05D005864 ORTHO05D006770 3.9e-52 209.9 444 39.9
MSTRG.6547 Avicennia marina HOM05D005864 ORTHO05D006770 2.8e-50 203.8 452 36.1
Nitab4.5_0006207g0020 Nicotiana tabacum HOM05D005864 ORTHO05D006770 2.8e-50 203.8 460 37.4
Sopen12g001690 Solanum pennellii HOM05D005864 ORTHO05D006770 4.1e-49 199.9 469 35.2
Ca_19101_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 1.3e-47 194.9 405 38.3
Nitab4.5_0000631g0060 Nicotiana tabacum HOM05D005864 ORTHO05D006770 1.3e-47 194.9 357 41.2
TPR.G19040 Trifolium pratense HOM05D005864 ORTHO05D006770 5.0e-47 193.0 408 46.1
Sed0014520 Sechium edule HOM05D005864 ORTHO05D006770 2.7e-45 187.2 386 40.4
PSO675G8332 Papaver somniferum HOM05D005864 ORTHO05D006770 3.5e-45 186.8 453 35.3
Sabra07G0098400 Salix brachista HOM05D005864 ORTHO05D006770 4.6e-45 186.4 404 38.4
RcHm_v2.0_Chr2g0160061 Rosa chinensis HOM05D005864 ORTHO05D006770 1.8e-44 184.5 189 57.1
HanXRQChr07g0191611 Helianthus annuus HOM05D005864 ORTHO05D006770 8.7e-44 182.2 468 37.2
Peaxi162Scf00012g03212 Petunia axillaris HOM05D005864 ORTHO05D006770 2.5e-43 180.6 465 34.4
unitig_699.g19613 Utricularia gibba HOM05D005864 ORTHO05D006770 5.7e-43 179.5 449 34.3
TAR624G1226 Trochodendron aralioides HOM05D005864 ORTHO05D006770 7.4e-43 179.1 307 40.7
Zm00001eb207650 Zea mays HOM05D005864 ORTHO05D006770 8.2e-42 175.6 448 35.3
COL.COLO4_12982 Corchorus olitorius HOM05D005864 ORTHO05D006770 1.1e-41 175.3 406 36.5
Oeu041940.1 Olea europaea HOM05D005864 ORTHO05D006770 4.5e-40 169.9 576 30.0
SGA_v2.0_scaffold70G23416 Striga asiatica HOM05D005864 ORTHO05D006770 5.9e-40 169.5 451 34.1
Rhsim06G0158200 Rhododendron simsii HOM05D005864 ORTHO05D006770 1.7e-39 167.9 476 35.5
Os02g0161200 Oryza sativa ssp. japonica HOM05D005864 ORTHO05D006770 4.2e-38 163.3 453 32.7
Lsat_1_v5_gn_3_43700 Lactuca sativa HOM05D005864 ORTHO05D006770 9.4e-38 162.2 400 36.2
Migut.M00396 Erythranthe guttata HOM05D005864 ORTHO05D006770 1.2e-37 161.8 445 34.4
THA.LOC104809073 Tarenaya hassleriana HOM05D005864 ORTHO05D006770 3.6e-37 160.2 400 33.5
PSO541G3214 Papaver somniferum HOM05D005864 ORTHO05D006770 4.6e-37 159.8 494 31.4
Gorai.005G209600 Gossypium raimondii HOM05D005864 ORTHO05D006770 6.1e-37 159.5 355 43.1
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-36 158.7 512 31.6
CDE05G1184 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 4.3e-35 153.3 411 33.1
unitig_85.g27303 Utricularia gibba HOM05D005864 ORTHO05D006770 3.7e-34 150.2 448 29.5
TAR626G1271 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.5e-32 144.8 146 59.6
Sp3g19810 Schrenkiella parvula HOM05D005864 ORTHO05D006770 2.6e-32 144.1 441 31.3
Aa31LG8G8400 Aethionema arabicum HOM05D005864 ORTHO05D006770 1.3e-31 141.7 439 31.0
BcaB04g20556 Brassica carinata HOM05D005864 ORTHO05D006770 5.0e-31 139.8 438 32.0
EL10Ac9g20653 Beta vulgaris HOM05D005864 ORTHO05D006770 8.5e-31 139.0 450 37.6
Thhalv10020800m.g Eutrema salsugineum HOM05D005864 ORTHO05D006770 1.1e-30 138.7 441 31.7
vmacro12226 Vaccinium macrocarpon HOM05D005864 ORTHO05D006770 1.1e-30 138.7 502 32.5
AL3G35960 Arabidopsis lyrata HOM05D005864 ORTHO05D006770 1.9e-30 137.9 379 31.9
CARHR097800 Cardamine hirsuta HOM05D005864 ORTHO05D006770 7.2e-30 136.0 442 30.3
BcaC09g49121 Brassica carinata HOM05D005864 ORTHO05D006770 6.1e-29 132.9 442 31.0
PGSC0003DMG401024331 Solanum tuberosum HOM05D005864 ORTHO05D006770 1.8e-28 131.3 449 30.3
FAN09G4739 Fragaria x ananassa HOM05D005864 ORTHO05D006770 6.7e-28 129.4 89 71.9
AT3G21810 Arabidopsis thaliana HOM05D005864 ORTHO05D006770 1.1e-27 128.6 453 30.0
AUR62037142 Chenopodium quinoa HOM05D005864 ORTHO05D006770 3.3e-27 127.1 407 32.4
A01p33130 Brassica napus HOM05D005864 ORTHO05D006770 4.4e-27 126.7 443 31.2
BolC1t04192H Brassica oleracea HOM05D005864 ORTHO05D006770 9.7e-27 125.6 442 30.3
AUR62025062 Chenopodium quinoa HOM05D005864 ORTHO05D006770 7.0e-25 119.4 551 26.5
SEGI_09449 Sequoiadendron giganteum HOM05D005864 ORTHO05D006770 3.2e-22 110.5 421 29.7
Actinidia32077 Actinidia chinensis HOM05D005864 ORTHO05D006770 3.6e-21 107.1 352 28.7
Carub.0003s2189 Capsella rubella HOM05D005864 ORTHO05D006770 3.0e-20 104.0 404 33.7
BraA01t03436Z Brassica rapa HOM05D005864 ORTHO05D006770 2.0e-19 101.3 451 29.5
DCAR_021187 Daucus carota HOM05D005864 ORTHO05D006770 5.7e-19 99.8 362 31.2
C01p42370 Brassica napus HOM05D005864 ORTHO05D006770 8.2e-18 95.9 459 27.5
Mapoly0099s0053 Marchantia polymorpha HOM05D005864 ORTHO05D006770 4.1e-17 93.6 283 32.9
CSS0029042 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 1.6e-16 91.7 163 42.3
MD04G1053600 Malus domestica HOM05D043473 ORTHO05D006770 1.3e-15 88.6 103 55.3
TAR626G0200 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.1e-14 85.5 165 41.8
Zm00001eb273610 Zea mays HOM05D005864 ORTHO05D006770 1.4e-12 78.6 240 30.8
CDE05G1677 Ceratophyllum demersum HOM05D005864 ORTHO05D006770 1.8e-12 78.2 50 72.0
Ca_27661_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 1.2e-11 75.5 146 39.0
Ca_27662_v3 Cicer arietinum L. HOM05D005864 ORTHO05D006770 1.2e-11 75.5 146 39.0
Ah.01g003700 Amaranthus hybridus HOM05D005864 ORTHO05D006770 2.8e-10 70.9 402 25.9
Pp3c11_20880 Physcomitrium patens HOM05D005864 ORTHO05D006770 4.8e-10 70.1 263 33.8
TAR375G0046 Trochodendron aralioides HOM05D005864 ORTHO05D006770 4.1e-09 67.0 57 57.9
TAR372G0002 Trochodendron aralioides HOM05D005864 ORTHO05D006770 9.1e-09 65.9 57 57.9
Hund01249 Selenicereus undatus HOM05D005864 ORTHO05D006770 1.6e-08 65.1 128 41.4
TAR353G0003 Trochodendron aralioides HOM05D005864 ORTHO05D006770 1.7e-07 61.6 54 57.4
CSS0018090 Camellia sinensis var. sinensis HOM05D005864 ORTHO05D006770 4.2e-06 57.0 66 50.0
Lsat_1_v5_gn_9_59080 Lactuca sativa HOM05D005864 ORTHO05D006770 7.2e-06 56.2 51 62.7


User provided reference genes

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