Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G209800 Prunus persica HOM05D007336 ORTHO05D009339 9.1e-66 253.4 130 100.0
Prupe.2G221300 Prunus persica HOM05D007336 ORTHO05D009339 2.0e-36 156.0 108 77.8
MD12G1210100 Malus domestica HOM05D007336 ORTHO05D009339 7.8e-33 144.1 108 71.3
MD04G1197300 Malus domestica HOM05D007336 ORTHO05D009339 1.5e-31 139.8 108 70.4
Prupe.6G317700 Prunus persica HOM05D007336 ORTHO05D009339 3.3e-31 138.7 103 74.8
FAN02G4454 Fragaria x ananassa HOM05D007336 ORTHO05D009339 3.1e-29 132.1 108 67.6
Cfa006663 Carpinus fangiana HOM05D007336 ORTHO05D009339 4.0e-29 131.7 105 67.6
FvH4_6g06960 Fragaria vesca HOM05D007336 ORTHO05D009339 4.0e-29 131.7 108 66.7
FAN05G1709 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.2e-29 131.3 114 64.0
FAN05G3591 Fragaria x ananassa HOM05D007336 ORTHO05D009339 5.2e-29 131.3 114 64.0
TAR362G0973 Trochodendron aralioides HOM05D007336 ORTHO05D009339 1.2e-28 130.2 107 65.4
Haze_04108 Corylus avellana HOM05D002548 ORTHO05D003031 1.5e-28 129.8 103 66.0
GSVIVG01031156001 Vitis vinifera HOM05D007336 ORTHO05D009339 1.5e-28 129.8 108 63.9
FAN09G1805 Fragaria x ananassa HOM05D007336 ORTHO05D009339 4.4e-28 128.3 108 65.7
FAN14G5314 Fragaria x ananassa HOM05D007336 ORTHO05D009339 4.4e-28 128.3 108 65.7
Glyma.19G230700 Glycine max HOM05D007336 ORTHO05D009339 4.4e-28 128.3 113 59.3
QL03p019121 Quercus lobata HOM05D007336 ORTHO05D009339 4.4e-28 128.3 102 68.6
VMungo1383G0834 Vigna mungo HOM05D007336 ORTHO05D009339 4.4e-28 128.3 107 60.7
Psat0s3672g0040 Pisum sativum HOM05D007336 ORTHO05D009339 7.5e-28 127.5 114 58.8
Lj1g0024848 Lotus japonicus HOM05D007336 ORTHO05D009339 9.9e-28 127.1 114 58.8
Manes.01G127100 Manihot esculenta HOM05D007336 ORTHO05D009339 1.3e-27 126.7 104 63.5
RcHm_v2.0_Chr3g0456501 Rosa chinensis HOM05D007336 ORTHO05D009339 2.2e-27 125.9 108 63.9
arahy.Tifrunner.gnm1.ann1.N7WCQ3 Arachis hypogaea HOM05D000001 ORTHO05D010781 2.9e-27 125.6 106 63.2
Phvul.001G227200 Phaseolus vulgaris HOM05D007336 ORTHO05D009339 2.9e-27 125.6 114 59.6
arahy.Tifrunner.gnm1.ann1.63GRQU Arachis hypogaea HOM05D007336 ORTHO05D010781 4.9e-27 124.8 106 62.3
CiPaw.08G158700 Carya illinoinensis HOM05D007336 ORTHO05D009339 1.1e-26 123.6 102 65.7
Eucgr.H03266 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-26 123.6 114 59.6
TPR.G39916 Trifolium pratense HOM05D007336 ORTHO05D009339 2.4e-26 122.5 114 56.1
Atru.chr1.2191 Acer truncatum HOM05D007336 ORTHO05D009339 3.2e-26 122.1 104 61.5
Atru.chr1.2192 Acer truncatum HOM05D007336 ORTHO05D009339 3.2e-26 122.1 104 61.5
Gohir.D11G280800 Gossypium hirsutum HOM05D007336 ORTHO05D009339 4.1e-26 121.7 108 61.1
Lalb_Chr16g0391581 Lupinus albus HOM05D007336 ORTHO05D009339 4.1e-26 121.7 114 57.9
ClCG02G015210 Citrullus lanatus HOM05D007336 ORTHO05D009339 7.1e-26 120.9 102 66.7
MELO3C004210.2 Cucumis melo HOM05D007336 ORTHO05D009339 7.1e-26 120.9 102 65.7
Eucgr.H03264 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.2e-25 120.2 114 58.8
Gorai.007G303000 Gossypium raimondii HOM05D007336 ORTHO05D009339 1.6e-25 119.8 108 60.2
Medtr7g112530 Medicago truncatula HOM05D007336 ORTHO05D009339 2.1e-25 119.4 114 55.3
Potri.005G021800 Populus trichocarpa HOM05D007336 ORTHO05D009339 2.1e-25 119.4 114 55.3
Aqoxy2G02873 Aquilegia oxysepala HOM05D007336 ORTHO05D009339 2.7e-25 119.0 110 58.2
CANSAT54G2288 Cannabis sativa HOM05D007336 ORTHO05D009339 3.5e-25 118.6 101 64.4
CsaV3_2G006800 Cucumis sativus L. HOM05D007336 ORTHO05D009339 6.0e-25 117.9 102 64.7
Sed0016582 Sechium edule HOM05D007336 ORTHO05D009339 6.0e-25 117.9 111 63.1
Duzib128G0390 Durio zibethinus HOM05D007336 ORTHO05D009339 1.3e-24 116.7 108 60.2
Cpa.g.sc48.123 Carica papaya HOM05D007336 ORTHO05D009339 1.7e-24 116.3 114 57.0
COL.COLO4_03798 Corchorus olitorius HOM05D007336 ORTHO05D009339 3.9e-24 115.2 108 57.4
Thecc.05G317300 Theobroma cacao HOM05D007336 ORTHO05D009339 5.1e-24 114.8 108 58.3
Ciclev10002848m.g Citrus clementina HOM05D007336 ORTHO05D009339 6.6e-24 114.4 108 59.3
Eucgr.H03263 Eucalyptus grandis HOM05D007336 ORTHO05D009339 6.6e-24 114.4 108 59.3
Eucgr.H03265 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-23 113.6 108 59.3
Eucgr.L02901 Eucalyptus grandis HOM05D007336 ORTHO05D009339 1.1e-23 113.6 108 59.3
PGR031G1948 Punica granatum HOM05D007336 ORTHO05D009339 2.5e-23 112.5 111 57.7
ATR0693G059 Amborella trichopoda HOM05D007336 ORTHO05D009339 3.3e-23 112.1 107 55.1
MBI18_g25083_MAGBIO Magnolia biondii HOM05D007336 ORTHO05D009339 7.3e-23 110.9 108 57.4
CDE02G0601 Ceratophyllum demersum HOM05D007336 ORTHO05D009339 2.1e-22 109.4 103 57.3
Dinv44340 Davidia involucrata HOM05D007336 ORTHO05D009339 3.6e-22 108.6 104 59.6
Rhsim04G0227800 Rhododendron simsii HOM05D007336 ORTHO05D009339 2.4e-21 105.9 104 55.8
vmacro08103 Vaccinium macrocarpon HOM05D007336 ORTHO05D009339 3.1e-21 105.5 108 54.6
Cc03_g01420 Coffea canephora HOM05D007336 ORTHO05D009339 5.2e-21 104.8 108 52.8
Dinv29713 Davidia involucrata HOM05D002548 ORTHO05D003031 1.2e-20 103.6 102 59.8
Actinidia40305 Actinidia chinensis HOM05D007336 ORTHO05D009339 2.6e-20 102.4 104 54.8
BcaB04g20156 Brassica carinata HOM05D007336 ORTHO05D009339 2.6e-20 102.4 103 52.4
THA.LOC104805904 Tarenaya hassleriana HOM05D007336 ORTHO05D009339 2.6e-20 102.4 103 54.4
Thhalv10023757m.g Eutrema salsugineum HOM05D007336 ORTHO05D009339 3.4e-20 102.1 103 53.4
HanXRQChr13g0413951 Helianthus annuus HOM05D007336 ORTHO05D009339 5.8e-20 101.3 104 56.7
A01p27330 Brassica napus HOM05D007336 ORTHO05D009339 9.9e-20 100.5 103 51.5
C01p35170 Brassica napus HOM05D007336 ORTHO05D009339 9.9e-20 100.5 103 51.5
BolC1t03475H Brassica oleracea HOM05D007336 ORTHO05D009339 9.9e-20 100.5 103 51.5
BraA01t02872Z Brassica rapa HOM05D007336 ORTHO05D009339 9.9e-20 100.5 103 51.5
BcaC09g49567 Brassica carinata HOM05D007336 ORTHO05D009339 1.3e-19 100.1 103 51.5
AL1G65880 Arabidopsis lyrata HOM05D007336 ORTHO05D009339 1.7e-19 99.8 103 52.4
CSS0001044 Camellia sinensis var. sinensis HOM05D007336 ORTHO05D009339 1.7e-19 99.8 106 54.7
Sp2g06650 Schrenkiella parvula HOM05D007336 ORTHO05D009339 1.7e-19 99.8 103 51.5
Migut.G00122 Erythranthe guttata HOM05D007336 ORTHO05D009339 2.9e-19 99.0 104 52.9
CAN.G14.12 Capsicum annuum HOM05D007336 ORTHO05D009339 4.9e-19 98.2 99 55.6
Lsat_1_v5_gn_6_76001 Lactuca sativa HOM05D007336 ORTHO05D009339 4.9e-19 98.2 106 54.7
SEGI_32823 Sequoiadendron giganteum HOM05D007336 ORTHO05D009339 4.9e-19 98.2 108 48.1
PGSC0003DMG400006241 Solanum tuberosum HOM05D007336 ORTHO05D009339 8.4e-19 97.4 99 53.5
MSTRG.3884 Avicennia marina HOM05D007336 ORTHO05D009339 1.9e-18 96.3 102 52.0
AT1G56260 Arabidopsis thaliana HOM05D007336 ORTHO05D009339 2.4e-18 95.9 104 51.9
Hund20531 Selenicereus undatus HOM05D007336 ORTHO05D009339 5.4e-18 94.7 104 52.9
Nitab4.5_0002755g0010 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.2e-17 93.6 111 49.5
SalBow2G0618 Salvia bowleyana HOM05D007336 ORTHO05D009339 1.2e-17 93.6 99 51.5
Aa31LG2G11600 Aethionema arabicum HOM05D007336 ORTHO05D009339 1.6e-17 93.2 97 55.7
Carub.0002s0790 Capsella rubella HOM05D007336 ORTHO05D009339 2.1e-17 92.8 104 51.0
AUR62018066 Chenopodium quinoa HOM05D007336 ORTHO05D009339 2.1e-17 92.8 110 47.3
HPP92_013733 Vanilla planifolia HOM05D007336 ORTHO05D009339 2.7e-17 92.4 103 47.6
Peaxi162Scf00065g01021 Petunia axillaris HOM05D007336 ORTHO05D009339 3.5e-17 92.0 99 54.5
Ah.04g153680 Amaranthus hybridus HOM05D007336 ORTHO05D009339 4.6e-17 91.7 99 53.5
DCAR_030493 Daucus carota HOM05D007336 ORTHO05D009339 4.6e-17 91.7 106 48.1
AUR62015269 Chenopodium quinoa HOM05D007336 ORTHO05D009339 6.0e-17 91.3 104 48.1
CARHR289820 Cardamine hirsuta HOM05D007336 ORTHO05D009339 1.0e-16 90.5 103 47.6
Sc19g0005520 Simmondsia chinensis HOM05D007336 ORTHO05D009339 1.3e-16 90.1 99 54.5
Nitab4.5_0000306g0320 Nicotiana tabacum HOM05D007336 ORTHO05D009339 1.7e-16 89.7 104 51.0
Solyc01g065710.3 Solanum lycopersicum HOM05D007336 ORTHO05D009339 2.3e-16 89.4 99 50.5
Sopen01g027110 Solanum pennellii HOM05D007336 ORTHO05D009339 2.3e-16 89.4 99 50.5
Zm00001eb300400 Zea mays HOM05D007336 ORTHO05D009339 8.7e-16 87.4 110 42.7
PSO832G0037 Papaver somniferum HOM05D007336 ORTHO05D009339 1.1e-15 87.0 113 42.5
SGA_v2.0_scaffold104G30104 Striga asiatica HOM05D007336 ORTHO05D009339 1.5e-15 86.7 108 46.3
EL10Ac3g06656 Beta vulgaris HOM05D007336 ORTHO05D009339 9.6e-15 84.0 99 47.5
AagrBONN_evm.TU.Sc2ySwM_344.3688 Anthoceros agrestis HOM05D007336 ORTHO05D009339 4.0e-13 78.6 107 38.3
Gohir.A11G270600 Gossypium hirsutum HOM05D007336 ORTHO05D009339 4.0e-13 78.6 81 54.3
Nn4g25729 Nelumbo nucifera HOM05D007336 ORTHO05D009339 4.0e-13 78.6 52 75.0
unitig_46.g18696 Utricularia gibba HOM05D007336 ORTHO05D009339 3.4e-12 75.5 102 43.1
Pp3c22_13440 Physcomitrium patens HOM05D007336 ORTHO05D009339 4.9e-11 71.6 110 36.4
Glyma.03G233600 Glycine max HOM05D007336 ORTHO05D009339 1.1e-10 70.5 53 60.4
Oeu031988.1 Olea europaea HOM05D007336 ORTHO05D009339 6.6e-08 61.2 57 54.4
SMO137G0008 Selaginella moellendorffii HOM05D007336 ORTHO05D009339 8.7e-08 60.8 104 34.6


User provided reference genes

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