Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 2.8e-91 338.6 166 100.0
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 4.3e-76 288.1 161 84.5
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 3.6e-75 285.0 161 83.9
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 1.8e-74 282.7 161 81.4
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 4.4e-73 278.1 165 81.8
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 5.8e-73 277.7 161 83.2
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 4.7e-67 258.1 162 74.1
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 8.3e-64 247.3 162 73.5
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 2.4e-63 245.7 154 74.7
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 4.1e-63 245.0 161 73.9
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 5.4e-63 244.6 151 72.8
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 1.6e-62 243.0 168 70.2
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 2.1e-62 242.7 157 72.6
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.3e-61 240.0 159 69.8
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 1.9e-60 236.1 158 70.3
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 2.5e-60 235.7 163 67.5
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 2.8e-59 232.3 165 69.1
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 1.1e-58 230.3 160 68.8
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.8e-58 229.6 159 68.6
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 5.2e-58 228.0 159 67.9
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 1.5e-57 226.5 156 68.6
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 1.5e-57 226.5 161 67.7
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 3.4e-57 225.3 166 63.9
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 7.6e-57 224.2 161 65.8
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.3e-56 223.4 162 66.7
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 2.2e-56 222.6 161 63.4
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 3.8e-56 221.9 164 65.9
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 3.8e-56 221.9 163 66.9
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 3.8e-56 221.9 146 70.5
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 5.4e-55 218.0 144 70.8
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 7.1e-55 217.6 166 63.9
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 1.2e-54 216.9 232 49.6
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.2e-54 216.9 156 66.7
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.7e-54 215.7 156 62.8
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.7e-54 215.7 156 62.8
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.7e-54 215.7 156 62.8
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 2.7e-54 215.7 167 61.7
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 3.5e-54 215.3 140 72.1
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 6.0e-54 214.5 161 64.6
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 7.8e-54 214.2 156 62.8
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 7.8e-54 214.2 165 63.6
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 3.9e-53 211.8 156 65.4
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 3.9e-53 211.8 149 68.5
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 5.6e-52 208.0 163 61.3
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 1.3e-51 206.8 164 61.6
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 2.1e-51 206.1 146 67.1
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 3.6e-51 205.3 155 60.0
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 3.6e-51 205.3 149 65.1
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 8.1e-51 204.1 134 70.1
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 1.1e-50 203.8 149 64.4
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 3.1e-50 202.2 154 62.3
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 1.2e-49 200.3 157 59.9
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 2.0e-49 199.5 205 52.2
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 7.6e-49 197.6 164 61.0
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 1.3e-48 196.8 166 60.2
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 8.4e-48 194.1 163 58.9
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.1e-47 193.7 173 59.5
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 1.1e-47 193.7 162 58.0
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 1.1e-47 193.7 146 61.6
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 7.1e-47 191.0 166 56.6
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 7.1e-47 191.0 166 56.6
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 1.6e-46 189.9 150 56.0
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 1.6e-46 189.9 166 56.0
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 4.6e-46 188.3 166 56.6
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 4.6e-46 188.3 134 67.9
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 6.0e-46 188.0 152 58.6
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 7.8e-46 187.6 149 60.4
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 1.5e-44 183.3 155 60.6
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 1.9e-44 183.0 132 63.6
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 2.5e-44 182.6 162 57.4
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 3.3e-44 182.2 160 56.9
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 9.6e-44 180.6 145 62.1
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 6.2e-43 177.9 141 58.2
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 2.6e-41 172.6 135 59.3
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 2.6e-41 172.6 150 56.0
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 2.6e-41 172.6 158 56.3
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.2e-40 169.5 156 53.2
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 2.9e-40 169.1 160 51.9
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 3.8e-40 168.7 142 56.3
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 8.4e-40 167.5 150 53.3
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 1.1e-39 167.2 160 51.9
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 2.7e-38 162.5 93 83.9
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 1.0e-37 160.6 128 57.0
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.1e-36 157.1 92 84.8
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 1.5e-36 156.8 127 60.6
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 1.9e-36 156.4 152 50.0
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 3.3e-36 155.6 152 51.3
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 7.4e-36 154.5 148 50.7
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 1.6e-35 153.3 113 61.9
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 3.7e-35 152.1 133 60.2
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 6.2e-35 151.4 98 70.4
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 8.1e-35 151.0 135 56.3
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 3.9e-29 132.1 106 64.2
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 8.7e-29 131.0 91 72.5
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 4.3e-28 128.6 155 50.3
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 1.8e-26 123.2 89 68.5
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 5.3e-26 121.7 92 60.9
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 8.4e-24 114.4 83 54.2
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 1.4e-23 113.6 138 44.9
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.2e-22 110.5 86 60.5
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 1.2e-22 110.5 74 74.3
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 4.6e-22 108.6 137 42.3
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 3.0e-21 105.9 68 73.5
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 3.0e-21 105.9 72 61.1
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 7.4e-20 101.3 151 34.4
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 1.8e-18 96.7 72 54.2
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.4e-15 87.0 113 41.6
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.0e-13 80.9 44 86.4
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 4.8e-11 72.0 73 49.3
MD17G1110300 Malus domestica HOM05D007186 ORTHO05D008970 1.2e-09 67.4 42 76.2
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 1.5e-09 67.0 60 60.0


User provided reference genes

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