Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G198500 Prunus persica HOM05D008806 ORTHO05D003654 2.1e-86 322.8 227 100.0
FvH4_6g40700 Fragaria vesca HOM05D008806 ORTHO05D003654 4.5e-36 155.6 205 61.5
FAN02G3820 Fragaria x ananassa HOM05D005871 ORTHO05D003654 7.7e-36 154.8 212 51.4
FAN05G0544 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.0e-27 127.9 172 54.7
FAN09G0572 Fragaria x ananassa HOM05D008806 ORTHO05D003654 1.3e-27 127.5 171 50.9
QL06p003419 Quercus lobata HOM05D008806 ORTHO05D003654 1.9e-26 123.6 225 43.6
FAN14G2730 Fragaria x ananassa HOM05D008806 ORTHO05D003654 4.2e-26 122.5 171 60.8
Cfa014230 Carpinus fangiana HOM05D008806 ORTHO05D003654 1.6e-25 120.6 211 43.1
QL08p028006 Quercus lobata HOM05D008806 ORTHO05D003654 4.7e-25 119.0 223 48.0
CiPaw.03G281200 Carya illinoinensis HOM05D005871 ORTHO05D003654 8.0e-25 118.2 226 45.1
Haze_12634 Corylus avellana HOM05D008806 ORTHO05D003654 4.4e-23 112.5 212 44.8
TAR626G0615 Trochodendron aralioides HOM05D005871 ORTHO05D003654 9.8e-23 111.3 225 38.2
Ciclev10016749m.g Citrus clementina HOM05D008806 ORTHO05D003654 8.3e-22 108.2 228 39.5
Duzib138G0120 Durio zibethinus HOM05D008806 ORTHO05D003654 1.6e-17 94.0 208 36.5
Nn1g07488 Nelumbo nucifera HOM05D005871 ORTHO05D003654 2.1e-17 93.6 223 35.4
Manes.12G064700 Manihot esculenta HOM05D008806 ORTHO05D003654 3.0e-16 89.7 225 36.0
PGSC0003DMG400017373 Solanum tuberosum HOM05D016037 ORTHO05D003654 2.0e-15 87.0 206 35.9
Dinv26612 Davidia involucrata HOM05D008806 ORTHO05D003654 4.4e-15 85.9 158 43.7
Thecc.01G195400 Theobroma cacao HOM05D008806 ORTHO05D003654 7.5e-15 85.1 218 33.5
Cfa017914 Carpinus fangiana HOM05D000074 ORTHO05D000220 6.4e-14 82.0 102 53.9
Gohir.D07G198000 Gossypium hirsutum HOM05D008806 ORTHO05D003654 6.4e-14 82.0 206 35.4
Gorai.001G221600 Gossypium raimondii HOM05D008806 ORTHO05D003654 6.4e-14 82.0 206 35.4
Sed0022932 Sechium edule HOM05D008806 ORTHO05D003654 6.4e-14 82.0 201 33.3
Haze_09808 Corylus avellana HOM05D005871 ORTHO05D003654 1.1e-13 81.3 201 36.3
Potri.014G166900 Populus trichocarpa HOM05D008806 ORTHO05D003654 1.1e-13 81.3 212 45.8
Duzib133G1309 Durio zibethinus HOM05D008806 ORTHO05D003654 2.4e-13 80.1 214 35.5
Cfa020208 Carpinus fangiana HOM05D005871 ORTHO05D003654 1.2e-12 77.8 201 38.8
ClCG02G002830 Citrullus lanatus HOM05D008806 ORTHO05D003654 1.6e-12 77.4 213 44.6
Peaxi162Scf00802g10028 Petunia axillaris HOM05D016037 ORTHO05D003654 1.6e-12 77.4 217 35.5
TWI36G1583 Tripterygium wilfordii HOM05D008806 ORTHO05D003654 5.9e-12 75.5 212 48.6
Gorai.009G449400 Gossypium raimondii HOM05D005871 ORTHO05D003654 7.8e-12 75.1 223 39.9
Sed0025236 Sechium edule HOM05D008806 ORTHO05D003654 7.8e-12 75.1 204 37.3
COL.COLO4_09813 Corchorus olitorius HOM05D005871 ORTHO05D003654 1.0e-11 74.7 258 42.2
Glyma.18G078200 Glycine max HOM05D005871 ORTHO05D003654 1.3e-11 74.3 260 30.4
Rhsim06G0176100 Rhododendron simsii HOM05D008806 ORTHO05D003654 1.3e-11 74.3 221 37.6
Glyma.08G328600 Glycine max HOM05D005871 ORTHO05D003654 1.7e-11 73.9 260 28.8
Gohir.A07G191701 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.7e-11 73.9 206 33.5
Gorai.009G449600 Gossypium raimondii HOM05D005871 ORTHO05D003654 1.7e-11 73.9 224 39.7
Nitab4.5_0001701g0160 Nicotiana tabacum HOM05D016037 ORTHO05D003654 1.7e-11 73.9 218 31.2
TAR629G2179 Trochodendron aralioides HOM05D005871 ORTHO05D003654 1.7e-11 73.9 133 40.6
Duzib170G1062 Durio zibethinus HOM05D005871 ORTHO05D003654 2.3e-11 73.6 237 34.2
Manes.13G062200 Manihot esculenta HOM05D008806 ORTHO05D003654 2.3e-11 73.6 210 35.7
Thecc.07G015800 Theobroma cacao HOM05D005871 ORTHO05D003654 2.3e-11 73.6 265 30.2
TAR629G1912 Trochodendron aralioides HOM05D005871 ORTHO05D003654 2.3e-11 73.6 198 46.0
Gohir.A04G006400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 3.0e-11 73.2 222 33.3
Nn1g03208 Nelumbo nucifera HOM05D005871 ORTHO05D003654 3.0e-11 73.2 219 31.5
Solyc07g045530.2 Solanum lycopersicum HOM05D016037 ORTHO05D003654 3.0e-11 73.2 107 43.0
Lj6g0021132 Lotus japonicus HOM05D005871 ORTHO05D003654 5.0e-11 72.4 249 29.3
Gohir.D05G383100 Gossypium hirsutum HOM05D005871 ORTHO05D003654 6.6e-11 72.0 229 35.4
Phvul.006G056300 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 6.6e-11 72.0 244 28.3
MD03G1184900 Malus domestica HOM05D005871 ORTHO05D003654 1.1e-10 71.2 235 37.9
SalBow7G0966 Salvia bowleyana HOM05D005871 ORTHO05D003654 1.1e-10 71.2 212 29.7
Gohir.A07G191600 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.5e-10 70.9 205 33.7
MELO3C028684.2 Cucumis melo HOM05D008806 ORTHO05D003654 1.9e-10 70.5 201 44.3
Sabra14G0126900 Salix brachista HOM05D008806 ORTHO05D003654 1.9e-10 70.5 196 34.2
VMungo0540G2170 Vigna mungo HOM05D005871 ORTHO05D003654 1.9e-10 70.5 247 38.9
QL08p004709 Quercus lobata HOM05D005871 ORTHO05D003654 2.5e-10 70.1 240 47.1
CiPaw.12G137100 Carya illinoinensis HOM05D005871 ORTHO05D003654 3.3e-10 69.7 226 37.6
Gohir.D05G383000 Gossypium hirsutum HOM05D005871 ORTHO05D003654 4.3e-10 69.3 217 35.5
Gohir.D05G382900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 5.6e-10 68.9 217 38.7
Manes.03G140300 Manihot esculenta HOM05D005871 ORTHO05D003654 5.6e-10 68.9 261 29.9
Gohir.D07G197900 Gossypium hirsutum HOM05D008806 ORTHO05D003654 1.2e-09 67.8 205 37.1
Gorai.001G221500 Gossypium raimondii HOM05D008806 ORTHO05D003654 1.2e-09 67.8 205 33.7
Hma1.2p1_0657F.1_g196840 Hydrangea macrophylla HOM05D005871 ORTHO05D003654 3.6e-09 66.2 222 28.4
Glyma.02G299500 Glycine max HOM05D005871 ORTHO05D003654 4.7e-09 65.9 256 35.9
Eucgr.F02056 Eucalyptus grandis HOM05D005871 ORTHO05D003654 6.2e-09 65.5 245 29.0
Prupe.4G241600 Prunus persica HOM05D005871 ORTHO05D003654 6.2e-09 65.5 224 33.0
Sabra16G0239800 Salix brachista HOM05D005871 ORTHO05D003654 6.2e-09 65.5 258 29.8
Lalb_Chr04g0247911 Lupinus albus HOM05D005871 ORTHO05D003654 8.0e-09 65.1 253 28.5
TPR.G35473 Trifolium pratense HOM05D005871 ORTHO05D003654 8.0e-09 65.1 196 35.2
Eucgr.F02055 Eucalyptus grandis HOM05D005871 ORTHO05D003654 1.0e-08 64.7 230 33.0
Atru.chr2.3672 Acer truncatum HOM05D005871 ORTHO05D003654 1.8e-08 63.9 79 50.6
Phvul.008G278200 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 3.1e-08 63.2 228 30.3
Gorai.004G033400 Gossypium raimondii HOM05D005871 ORTHO05D003654 4.0e-08 62.8 232 31.5
Gohir.D08G035400 Gossypium hirsutum HOM05D005871 ORTHO05D003654 5.2e-08 62.4 232 31.5
Manes.03G140301 Manihot esculenta HOM05D005871 ORTHO05D003654 5.2e-08 62.4 260 40.4
Potri.001G366500 Populus trichocarpa HOM05D005871 ORTHO05D003654 6.8e-08 62.0 78 52.6
Manes.12G066000 Manihot esculenta HOM05D008806 ORTHO05D003654 1.2e-07 61.2 103 41.7
SGA_v2.0_scaffold73G24498 Striga asiatica HOM05D016037 ORTHO05D003654 1.2e-07 61.2 193 33.2
TWI39G0465 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 1.2e-07 61.2 225 30.7
DCAR_022606 Daucus carota HOM05D005871 ORTHO05D003654 2.6e-07 60.1 71 53.5
Gohir.D05G382950 Gossypium hirsutum HOM05D005871 ORTHO05D003654 3.4e-07 59.7 99 43.4
Gorai.009G449500 Gossypium raimondii HOM05D005871 ORTHO05D003654 3.4e-07 59.7 99 43.4
VMungo0647G1579 Vigna mungo HOM05D005871 ORTHO05D003654 4.4e-07 59.3 231 29.4
Atru.chr6.3383_Atru.chr6.3384 Acer truncatum HOM05D008806 ORTHO05D003654 5.8e-07 58.9 204 34.3
Manes.15G061300 Manihot esculenta HOM05D005871 ORTHO05D003654 7.5e-07 58.5 207 30.0
CiPaw.11G202600 Carya illinoinensis HOM05D005871 ORTHO05D003654 9.8e-07 58.2 197 37.1
CANSAT64G0243 Cannabis sativa HOM05D008806 ORTHO05D003654 1.3e-06 57.8 88 46.6
Eucgr.L00169 Eucalyptus grandis HOM05D005871 ORTHO05D003654 1.3e-06 57.8 82 36.6
Gohir.A08G024900 Gossypium hirsutum HOM05D005871 ORTHO05D003654 1.3e-06 57.8 226 30.5
TWI38G0819 Tripterygium wilfordii HOM05D005871 ORTHO05D003654 1.3e-06 57.8 216 27.8
Phvul.006G140600 Phaseolus vulgaris HOM05D005871 ORTHO05D003654 1.7e-06 57.4 225 27.1
SalBow8G3140 Salvia bowleyana HOM05D005871 ORTHO05D003654 1.7e-06 57.4 194 35.6
Cpa.g.sc211.26 Carica papaya HOM05D008806 ORTHO05D003654 2.2e-06 57.0 114 38.6
Ah.09g234010 Amaranthus hybridus HOM05D005871 ORTHO05D003654 2.9e-06 56.6 199 29.1
Lj6g0012820 Lotus japonicus HOM05D005871 ORTHO05D003654 4.9e-06 55.8 126 32.5
A05p36410 Brassica napus HOM05D010616 ORTHO05D003654 6.4e-06 55.5 194 31.4
PGR083G2866 Punica granatum HOM05D005871 ORTHO05D003654 6.4e-06 55.5 238 34.0
Glyma.14G014200 Glycine max HOM05D005871 ORTHO05D003654 8.3e-06 55.1 262 26.3
Sed0014857 Sechium edule HOM05D005871 ORTHO05D003654 8.3e-06 55.1 237 33.8
VMungo0540G0718 Vigna mungo HOM05D005871 ORTHO05D003654 8.3e-06 55.1 218 29.4


User provided reference genes

Program Settings