Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 6.3e-137 490.7 240 100.0
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 6.3e-105 384.4 239 81.2
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 1.4e-96 356.7 239 77.0
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 2.7e-95 352.4 239 76.6
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 8.6e-94 347.4 241 74.7
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 3.4e-90 335.5 239 70.3
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 2.9e-89 332.4 240 71.7
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 1.2e-87 327.0 239 68.2
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 3.1e-83 312.4 243 66.3
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 1.5e-82 310.1 260 64.6
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 2.0e-82 309.7 261 64.0
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.7e-81 306.6 261 63.2
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 6.4e-81 304.7 240 65.4
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 2.4e-80 302.8 239 63.6
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 3.2e-80 302.4 244 67.2
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 3.2e-80 302.4 242 63.6
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 7.0e-80 301.2 240 65.0
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.2e-79 300.4 239 68.2
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.2e-79 300.4 239 68.2
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 2.7e-79 299.3 242 64.9
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 2.7e-79 299.3 240 64.6
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 6.0e-79 298.1 239 65.7
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 1.0e-78 297.4 242 63.6
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.0e-78 297.4 240 64.2
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 2.3e-78 296.2 244 63.1
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 8.6e-78 294.3 242 64.9
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 1.5e-74 283.5 243 63.0
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 3.4e-74 282.3 250 61.2
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.4e-74 282.0 249 60.2
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 5.8e-74 281.6 244 60.7
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 8.3e-73 277.7 241 59.3
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 4.1e-72 275.4 242 61.2
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 5.4e-72 275.0 246 60.6
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 2.1e-71 273.1 247 59.1
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 1.0e-70 270.8 238 57.6
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 3.0e-70 269.2 242 60.3
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 3.9e-70 268.9 247 58.7
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 3.3e-69 265.8 245 58.4
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 1.2e-68 263.8 235 57.9
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 3.6e-68 262.3 242 57.9
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 4.7e-68 261.9 244 56.6
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 1.4e-67 260.4 244 57.8
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 5.2e-67 258.5 242 58.3
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 1.2e-66 257.3 241 55.6
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 1.2e-66 257.3 265 55.1
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 7.6e-66 254.6 238 57.6
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 9.9e-66 254.2 248 58.5
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 1.3e-65 253.8 234 57.3
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 1.3e-65 253.8 250 57.2
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 2.2e-65 253.1 247 58.3
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 4.9e-65 251.9 235 59.6
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 4.9e-65 251.9 229 60.7
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 4.9e-65 251.9 229 60.7
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 1.9e-64 250.0 242 55.0
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 2.4e-64 249.6 246 54.5
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 3.2e-64 249.2 241 56.0
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 7.1e-64 248.1 248 55.6
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 2.7e-63 246.1 244 56.6
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 4.6e-63 245.4 227 56.8
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 6.0e-63 245.0 238 53.8
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 6.0e-63 245.0 240 56.2
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 1.7e-62 243.4 238 55.5
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 3.0e-62 242.7 246 53.3
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 3.0e-62 242.7 237 57.4
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 5.1e-62 241.9 247 54.7
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 5.1e-62 241.9 239 54.8
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 5.1e-62 241.9 241 54.8
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 8.6e-62 241.1 244 52.9
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 1.5e-61 240.4 222 57.2
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.9e-61 240.0 241 53.5
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 3.3e-61 239.2 183 63.9
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 5.6e-61 238.4 242 54.5
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 5.6e-61 238.4 245 53.9
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 9.6e-61 237.7 240 53.8
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 1.2e-60 237.3 246 52.4
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 3.6e-60 235.7 242 52.9
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 3.6e-60 235.7 242 52.9
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 6.2e-60 235.0 244 52.5
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 8.1e-60 234.6 131 78.6
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 1.8e-59 233.4 239 53.1
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 2.4e-59 233.0 240 52.9
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 2.4e-59 233.0 234 53.0
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 4.0e-59 232.3 127 83.5
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 8.9e-59 231.1 251 49.8
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 1.2e-58 230.7 154 71.4
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 1.5e-58 230.3 244 50.4
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 2.6e-58 229.6 154 70.8
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 5.8e-58 228.4 169 65.1
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 4.9e-57 225.3 248 50.0
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 1.2e-55 220.7 241 50.2
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 1.9e-53 213.4 239 49.4
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 2.5e-53 213.0 117 79.5
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 5.6e-53 211.8 260 48.1
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 2.0e-50 203.4 117 74.4
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 2.7e-47 193.0 104 82.7
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 1.3e-44 184.1 110 76.4
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 6.4e-41 171.8 135 56.3
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 5.5e-40 168.7 207 46.9
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 3.5e-39 166.0 135 57.8
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 4.6e-39 165.6 177 45.8
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 6.0e-39 165.2 131 58.8
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 1.3e-36 157.5 84 84.5
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 4.0e-35 152.5 134 59.7
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 1.5e-34 150.6 173 50.3
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 3.4e-34 149.4 109 68.8
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 8.2e-28 128.3 155 41.3
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 3.1e-27 126.3 163 42.9
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 1.2e-18 97.8 138 49.3
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 7.4e-13 78.6 45 73.3
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 2.3e-06 57.0 77 44.2


User provided reference genes

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