Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G167000 Prunus persica HOM05D005491 ORTHO05D006973 2.6e-118 428.7 211 100.0
MD09G1158800 Malus domestica HOM05D005491 ORTHO05D006973 1.5e-70 270.0 156 85.9
RcHm_v2.0_Chr2g0150111 Rosa chinensis HOM05D005491 ORTHO05D006973 2.9e-61 239.2 157 79.0
Haze_10765 Corylus avellana HOM05D005491 ORTHO05D006973 1.1e-60 237.3 155 78.1
CANSAT01G1753 Cannabis sativa HOM05D005491 ORTHO05D006973 3.5e-59 232.3 158 75.9
CiPaw.02G049600 Carya illinoinensis HOM05D005491 ORTHO05D006973 6.0e-59 231.5 155 74.8
Cfa005563 Carpinus fangiana HOM05D005491 ORTHO05D006973 1.3e-58 230.3 157 74.5
FvH4_6g37280 Fragaria vesca HOM05D005491 ORTHO05D006973 4.3e-57 225.3 157 76.4
Dinv20356 Davidia involucrata HOM05D005491 ORTHO05D006973 1.3e-56 223.8 167 70.7
FAN14G5581 Fragaria x ananassa HOM05D005491 ORTHO05D005725 4.8e-56 221.9 208 61.1
FAN09G1743 Fragaria x ananassa HOM05D005491 ORTHO05D006973 1.8e-55 219.9 208 60.6
FAN02G3895 Fragaria x ananassa HOM05D005491 ORTHO05D006973 4.5e-54 215.3 208 60.1
GSVIVG01016137001 Vitis vinifera HOM05D005491 ORTHO05D006973 5.8e-54 214.9 155 70.3
CSS0040638 Camellia sinensis var. sinensis HOM05D005491 ORTHO05D006973 1.8e-50 203.4 159 69.2
Manes.16G045400 Manihot esculenta HOM05D005491 ORTHO05D006973 3.9e-50 202.2 165 67.3
Haze_10762 Corylus avellana HOM05D005491 ORTHO05D006973 2.8e-48 196.1 131 77.9
vmacro17061 Vaccinium macrocarpon HOM05D005491 ORTHO05D006973 6.2e-48 194.9 168 64.3
Potri.010G250200 Populus trichocarpa HOM05D005491 ORTHO05D006973 5.3e-47 191.8 161 65.8
Nn2g12576 Nelumbo nucifera HOM05D005491 ORTHO05D006973 5.8e-46 188.3 149 64.4
Atru.chr1.2698 Acer truncatum HOM05D005491 ORTHO05D006973 5.0e-45 185.3 168 59.5
Ciclev10026115m.g Citrus clementina HOM05D005491 ORTHO05D006973 8.4e-45 184.5 156 63.5
Sabra10G0194700 Salix brachista HOM05D005491 ORTHO05D006973 8.4e-45 184.5 162 64.2
Eucgr.F04012 Eucalyptus grandis HOM05D005491 ORTHO05D006973 1.1e-44 184.1 161 65.2
Rhsim12G0214300 Rhododendron simsii HOM05D005491 ORTHO05D006973 3.2e-44 182.6 171 61.4
Sc15g0000930 Simmondsia chinensis HOM05D005491 ORTHO05D006973 5.5e-44 181.8 152 63.2
Thecc.06G064400 Theobroma cacao HOM05D005491 ORTHO05D006973 5.5e-44 181.8 155 61.9
Sed0002659 Sechium edule HOM05D005491 ORTHO05D006973 1.2e-43 180.6 155 59.4
Hund18611 Selenicereus undatus HOM05D005491 ORTHO05D006973 1.2e-43 180.6 160 61.2
Cpa.g.c38087 Carica papaya HOM05D005491 ORTHO05D006973 1.6e-43 180.3 156 63.5
PGR102G1295 Punica granatum HOM05D005491 ORTHO05D006973 1.6e-43 180.3 156 63.5
Duzib192G0032 Durio zibethinus HOM05D005491 ORTHO05D006973 2.1e-43 179.9 156 60.9
Ah.15g094670 Amaranthus hybridus HOM05D005491 ORTHO05D006973 1.0e-42 177.6 158 61.4
MELO3C006296.2 Cucumis melo HOM05D005491 ORTHO05D006973 3.0e-42 176.0 155 60.0
CsaV3_3G010780 Cucumis sativus L. HOM05D005491 ORTHO05D006973 3.9e-42 175.6 155 60.6
COL.COLO4_31205 Corchorus olitorius HOM05D005491 ORTHO05D006973 1.5e-41 173.7 182 53.3
Actinidia00637 Actinidia chinensis HOM05D005491 ORTHO05D006973 4.3e-41 172.2 166 60.8
Sed0027406 Sechium edule HOM05D005491 ORTHO05D006973 2.2e-40 169.9 155 56.8
PSO063G4509 Papaver somniferum HOM05D005491 ORTHO05D006973 2.8e-40 169.5 136 61.8
CARHR097080 Cardamine hirsuta HOM05D005491 ORTHO05D006973 1.1e-39 167.5 160 60.0
EL10Ac7g18224 Beta vulgaris HOM05D005491 ORTHO05D006973 2.4e-39 166.4 181 54.1
Potri.008G008801 Populus trichocarpa HOM05D005491 ORTHO05D006973 2.4e-39 166.4 185 53.0
C01p43060 Brassica napus HOM05D005491 ORTHO05D006973 3.1e-39 166.0 162 59.3
BolC1t04253H Brassica oleracea HOM05D005491 ORTHO05D006973 3.1e-39 166.0 162 59.3
TAR383G0879 Trochodendron aralioides HOM05D005491 ORTHO05D006973 5.3e-39 165.2 93 83.9
BcaB04g20605 Brassica carinata HOM05D005491 ORTHO05D006973 6.9e-39 164.9 161 57.8
BcaNung05297 Brassica carinata HOM05D005491 ORTHO05D006973 6.9e-39 164.9 161 57.8
ClCG05G003150 Citrullus lanatus HOM05D005491 ORTHO05D006973 6.9e-39 164.9 176 53.4
Gorai.009G118600 Gossypium raimondii HOM05D005491 ORTHO05D006973 6.9e-39 164.9 154 60.4
BcaC09g49056 Brassica carinata HOM05D005491 ORTHO05D006973 9.0e-39 164.5 162 58.6
Gohir.D05G114500 Gossypium hirsutum HOM05D005491 ORTHO05D006973 9.0e-39 164.5 154 61.0
Carub.0003s2116 Capsella rubella HOM05D005491 ORTHO05D006973 1.2e-38 164.1 164 58.5
Sp3g19180 Schrenkiella parvula HOM05D005491 ORTHO05D006973 1.2e-38 164.1 161 57.1
PSO782G2961 Papaver somniferum HOM05D005491 ORTHO05D006973 1.5e-38 163.7 136 60.3
BcaB06g26202 Brassica carinata HOM05D005491 ORTHO05D006973 2.0e-38 163.3 161 57.1
AUR62025582 Chenopodium quinoa HOM05D005491 ORTHO05D006973 2.0e-38 163.3 161 55.3
AL3G35200 Arabidopsis lyrata HOM05D005491 ORTHO05D006973 2.6e-38 162.9 155 58.7
Thhalv10021148m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 3.4e-38 162.5 162 57.4
Lj6C21T3 Lonicera japonica HOM05D005491 ORTHO05D006973 3.4e-38 162.5 156 55.8
Thhalv10021146m.g Eutrema salsugineum HOM05D005491 ORTHO05D006973 5.9e-38 161.8 162 57.4
A01p33690 Brassica napus HOM05D005491 ORTHO05D006973 1.0e-37 161.0 161 58.4
Aqoxy7G03200 Aquilegia oxysepala HOM05D005491 ORTHO05D006973 2.2e-37 159.8 169 55.6
AT3G21200 Arabidopsis thaliana HOM05D005491 ORTHO05D006973 2.2e-37 159.8 155 58.1
Aa31LG8G7890 Aethionema arabicum HOM05D005491 ORTHO05D006973 5.0e-37 158.7 169 55.6
BraA01t03481Z Brassica rapa HOM05D005491 ORTHO05D006973 5.0e-37 158.7 161 57.8
BcaC05g28263 Brassica carinata HOM05D005491 ORTHO05D006973 6.5e-37 158.3 157 58.6
C05p42580 Brassica napus HOM05D005491 ORTHO05D006973 6.5e-37 158.3 157 58.6
Peaxi162Scf00038g02533 Petunia axillaris HOM05D005491 ORTHO05D006973 8.5e-37 157.9 152 59.9
BraA05t21640Z Brassica rapa HOM05D005491 ORTHO05D006973 1.9e-36 156.8 157 57.3
MBI14_g30702_MAGBIO Magnolia biondii HOM05D005491 ORTHO05D006973 1.9e-36 156.8 146 57.5
Lsat_1_v5_gn_4_88641 Lactuca sativa HOM05D005491 ORTHO05D006973 4.2e-36 155.6 183 47.5
Nitab4.5_0002885g0050 Nicotiana tabacum HOM05D005491 ORTHO05D006973 5.5e-36 155.2 113 68.1
THA.LOC104817926 Tarenaya hassleriana HOM05D005491 ORTHO05D006973 7.2e-36 154.8 169 54.4
A05p27490 Brassica napus HOM05D005491 ORTHO05D006973 1.2e-35 154.1 158 56.3
BolC5t32978H Brassica oleracea HOM05D005491 ORTHO05D006973 1.2e-35 154.1 157 57.3
Nitab4.5_0001691g0110 Nicotiana tabacum HOM05D005491 ORTHO05D006973 1.8e-34 150.2 145 57.9
PGSC0003DMG400009162 Solanum tuberosum HOM05D005491 ORTHO05D006973 8.8e-34 147.9 162 51.9
Lalb_Chr04g0264721 Lupinus albus HOM05D005491 ORTHO05D006973 2.5e-33 146.4 158 51.9
SGA_v2.0_scaffold4G02103 Striga asiatica HOM05D005491 ORTHO05D006973 7.4e-33 144.8 150 56.0
TWI18G1464 Tripterygium wilfordii HOM05D005491 ORTHO05D006973 2.8e-32 142.9 140 57.9
Cc04_g00370 Coffea canephora HOM05D005491 ORTHO05D006973 4.8e-32 142.1 176 53.4
Migut.D00894 Erythranthe guttata HOM05D005491 ORTHO05D006973 1.1e-31 141.0 137 56.2
CDE02G1684 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 1.2e-30 137.5 164 47.6
DCAR_007669 Daucus carota HOM05D005491 ORTHO05D006973 1.5e-30 137.1 112 65.2
arahy.Tifrunner.gnm1.ann1.5V72PU Arachis hypogaea HOM05D005491 ORTHO05D006973 7.7e-30 134.8 187 48.1
Lj3g0002967 Lotus japonicus HOM05D005491 ORTHO05D006973 7.7e-30 134.8 180 47.8
AUR62001366 Chenopodium quinoa HOM05D004422 ORTHO05D007331 1.3e-29 134.0 82 73.2
arahy.Tifrunner.gnm1.ann1.PDFG4L Arachis hypogaea HOM05D005491 ORTHO05D006973 3.8e-29 132.5 187 47.6
CAN.G790.23 Capsicum annuum HOM05D005491 ORTHO05D006973 6.5e-29 131.7 158 51.3
Solyc03g123880.3 Solanum lycopersicum HOM05D005491 ORTHO05D006973 8.5e-29 131.3 92 69.6
Sopen03g041620 Solanum pennellii HOM05D005491 ORTHO05D006973 1.9e-28 130.2 92 68.5
Lj6A3G42 Lonicera japonica HOM05D005491 ORTHO05D006973 3.2e-28 129.4 154 48.1
unitig_8.g3563 Utricularia gibba HOM05D006979 ORTHO05D008857 1.2e-27 127.5 105 58.1
SalBow7G0632 Salvia bowleyana HOM05D005491 ORTHO05D006973 1.6e-27 127.1 132 54.5
Psat7g263520 Pisum sativum HOM05D005491 ORTHO05D006973 2.7e-27 126.3 159 48.4
Glyma.08G222600 Glycine max HOM05D005491 ORTHO05D006973 3.6e-27 125.9 157 51.0
VMungo0647G0411 Vigna mungo HOM05D005491 ORTHO05D006973 7.9e-27 124.8 156 50.0
Oeu023761.1 Olea europaea HOM05D005491 ORTHO05D006973 1.0e-26 124.4 82 69.5
TPR.G38706 Trifolium pratense HOM05D005491 ORTHO05D006973 1.0e-26 124.4 160 48.8
Medtr4g006200 Medicago truncatula HOM05D005491 ORTHO05D006973 5.1e-26 122.1 161 46.0
Phvul.008G255600 Phaseolus vulgaris HOM05D005491 ORTHO05D006973 5.1e-26 122.1 157 48.4
Gohir.A05G114100 Gossypium hirsutum HOM05D005491 ORTHO05D006973 6.7e-26 121.7 124 59.7
Ca_20955_v3 Cicer arietinum L. HOM05D005491 ORTHO05D006973 2.6e-25 119.8 161 47.2
Gorai.002G157400 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.3e-24 117.5 108 63.0
Gohir.D01G126833 Gossypium hirsutum HOM05D005491 ORTHO05D006973 1.7e-24 117.1 108 62.0
CDE05G1859 Ceratophyllum demersum HOM05D005491 ORTHO05D006973 8.2e-24 114.8 104 55.8
SGA_v2.0_scaffold68G22804 Striga asiatica HOM05D005491 ORTHO05D006973 1.8e-23 113.6 94 62.8
Actinidia31136 Actinidia chinensis HOM05D005491 ORTHO05D006973 2.2e-21 106.7 195 42.1
Gohir.D06G077900 Gossypium hirsutum HOM05D005491 ORTHO05D006973 8.5e-21 104.8 103 60.2
Zm00001eb170870 Zea mays HOM05D005491 ORTHO05D006973 1.1e-20 104.4 95 50.5
HPP92_013427 Vanilla planifolia HOM05D005491 ORTHO05D006973 2.5e-20 103.2 153 43.8
HanXRQChr09g0277401 Helianthus annuus HOM05D005491 ORTHO05D006973 7.2e-20 101.7 128 47.7
Pp3c7_5080 Physcomitrium patens HOM05D005491 ORTHO05D006973 2.1e-19 100.1 98 54.1
Gorai.003G079200 Gossypium raimondii HOM05D005491 ORTHO05D006973 4.7e-19 99.0 83 63.9
Zm00001eb319280 Zea mays HOM05D005491 ORTHO05D006973 8.0e-19 98.2 102 48.0
Gorai.013G054800 Gossypium raimondii HOM05D005491 ORTHO05D006973 3.0e-18 96.3 83 62.7
Pp3c11_26760 Physcomitrium patens HOM05D005491 ORTHO05D006973 3.0e-18 96.3 97 51.5
AagrBONN_evm.TU.Sc2ySwM_368.2001 Anthoceros agrestis HOM05D005491 ORTHO05D006973 5.2e-18 95.5 96 49.0
Gorai.012G122800 Gossypium raimondii HOM05D005491 ORTHO05D006973 1.3e-16 90.9 52 76.9
Nn6g35127 Nelumbo nucifera HOM05D005491 ORTHO05D006973 1.3e-16 90.9 116 49.1
ATR0580G202 Amborella trichopoda HOM05D005491 ORTHO05D006973 1.7e-16 90.5 94 55.3
Mapoly0005s0279 Marchantia polymorpha HOM05D005491 ORTHO05D006973 1.7e-16 90.5 92 48.9
SEGI_00240 Sequoiadendron giganteum HOM05D005491 ORTHO05D006973 4.8e-16 89.0 96 47.9
FAN14G3055 Fragaria x ananassa HOM05D002283 ORTHO05D005725 7.7e-14 81.6 62 66.1
FvH4_6g36141 Fragaria vesca HOM05D002283 ORTHO05D005725 8.5e-13 78.2 83 56.6
ECA232G0321 Erigeron canadensis HOM05D005491 ORTHO05D006973 1.9e-12 77.0 145 39.3
MD17G1145100 Malus domestica HOM05D005491 ORTHO05D006973 1.2e-09 67.8 52 69.2


User provided reference genes

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