Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G166300 Prunus persica HOM05D006674 ORTHO05D007954 2.3e-206 722.2 424 100.0
MD17G1268600 Malus domestica HOM05D006674 ORTHO05D007954 6.4e-161 571.2 426 82.6
RcHm_v2.0_Chr3g0491391 Rosa chinensis HOM05D006674 ORTHO05D007954 6.3e-148 528.1 427 76.6
FvH4_1g30190 Fragaria vesca HOM05D006674 ORTHO05D007954 7.6e-146 521.2 429 75.5
FAN26G0259 Fragaria x ananassa HOM05D006674 ORTHO05D007954 1.2e-138 497.3 440 73.0
Haze_14280 Corylus avellana HOM05D006674 ORTHO05D007954 4.8e-124 448.7 430 68.8
Nn4g24371 Nelumbo nucifera HOM05D006674 ORTHO05D007954 3.1e-123 446.0 422 66.8
Eucgr.F02873 Eucalyptus grandis HOM05D006674 ORTHO05D007954 2.8e-116 422.9 426 63.1
Nitab4.5_0001650g0150 Nicotiana tabacum HOM05D006674 ORTHO05D007954 5.3e-115 418.7 435 64.4
Dinv28183 Davidia involucrata HOM05D006674 ORTHO05D007954 1.3e-113 414.1 426 63.8
Sc11g0004590 Simmondsia chinensis HOM05D006674 ORTHO05D007954 2.2e-113 413.3 428 62.9
Actinidia28801 Actinidia chinensis HOM05D006674 ORTHO05D007954 1.9e-112 410.2 426 63.4
PGSC0003DMG400013236 Solanum tuberosum HOM05D006674 ORTHO05D007954 7.2e-112 408.3 467 60.0
TWI77G1007 Tripterygium wilfordii HOM05D006674 ORTHO05D007954 4.7e-111 405.6 426 62.4
Nitab4.5_0009806g0010 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.0e-106 390.2 420 62.6
Lalb_Chr15g0084971 Lupinus albus HOM05D006674 ORTHO05D007954 1.1e-104 384.4 387 63.3
BcaB06g27104 Brassica carinata HOM05D006674 ORTHO05D007954 1.2e-103 380.9 422 58.1
Thhalv10027712m.g Eutrema salsugineum HOM05D006674 ORTHO05D007954 2.1e-103 380.2 414 58.7
Thecc.04G053800 Theobroma cacao HOM05D006674 ORTHO05D007954 2.1e-103 380.2 426 61.7
CSS0023224 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 8.0e-103 378.3 426 61.3
Glyma.11G215400 Glycine max HOM05D006674 ORTHO05D007954 1.4e-102 377.5 395 61.8
COL.COLO4_13419 Corchorus olitorius HOM05D006674 ORTHO05D007954 1.8e-102 377.1 420 61.7
Lj6g0000042 Lotus japonicus HOM05D006674 ORTHO05D007954 1.8e-102 377.1 391 63.2
Sp7g04510 Schrenkiella parvula HOM05D006674 ORTHO05D007954 1.8e-102 377.1 415 58.6
Duzib133G1445 Durio zibethinus HOM05D006674 ORTHO05D007954 1.2e-101 374.4 426 59.6
BcaC02g09589 Brassica carinata HOM05D006674 ORTHO05D007954 1.5e-101 374.0 421 57.5
Lj4C259T11 Lonicera japonica HOM05D006674 ORTHO05D007954 9.8e-101 371.3 336 60.4
Atru.chr1.1984 Acer truncatum HOM05D006674 ORTHO05D007954 4.9e-100 369.0 428 59.3
Glyma.18G041200 Glycine max HOM05D006674 ORTHO05D007954 8.3e-100 368.2 395 60.5
ECA236G3280 Erigeron canadensis HOM05D006674 ORTHO05D007954 1.8e-99 367.1 423 57.7
Lsat_1_v5_gn_1_78040 Lactuca sativa HOM05D006674 ORTHO05D007954 2.7e-98 363.2 409 60.6
CsaV3_3G017830 Cucumis sativus L. HOM05D006674 ORTHO05D007954 5.0e-97 359.0 428 59.6
Cc07_g13280 Coffea canephora HOM05D006674 ORTHO05D007954 6.6e-97 358.6 426 58.0
Phvul.001G229300 Phaseolus vulgaris HOM05D006674 ORTHO05D007954 5.6e-96 355.5 390 60.3
EL10Ac2g03314 Beta vulgaris HOM05D006674 ORTHO05D007954 3.6e-95 352.8 423 56.5
TPR.G24904 Trifolium pratense HOM05D006674 ORTHO05D007954 5.2e-94 349.0 401 57.9
GSVIVG01030703001 Vitis vinifera HOM05D006674 ORTHO05D007954 4.4e-93 345.9 415 59.0
Sed0023155 Sechium edule HOM05D006674 ORTHO05D007954 8.3e-92 341.7 426 58.5
Psat5g120320 Pisum sativum HOM05D006674 ORTHO05D007954 3.2e-91 339.7 391 58.8
Aa31LG9G17490 Aethionema arabicum HOM05D006674 ORTHO05D007954 4.1e-91 339.3 418 54.5
Manes.01G119600 Manihot esculenta HOM05D006674 ORTHO05D007954 4.6e-90 335.9 430 55.8
arahy.Tifrunner.gnm1.ann1.V27PH4 Arachis hypogaea HOM05D006674 ORTHO05D007954 7.8e-90 335.1 372 60.2
arahy.Tifrunner.gnm1.ann1.M54V7M Arachis hypogaea HOM05D006674 ORTHO05D007954 1.0e-89 334.7 372 59.9
Medtr3g065220 Medicago truncatula HOM05D006674 ORTHO05D007954 1.0e-89 334.7 391 57.8
vmacro18526 Vaccinium macrocarpon HOM05D006674 ORTHO05D007954 1.0e-89 334.7 426 57.7
VMungo1383G3322 Vigna mungo HOM05D006674 ORTHO05D007954 1.7e-89 334.0 430 46.0
Potri.004G085200 Populus trichocarpa HOM05D006674 ORTHO05D007954 6.6e-89 332.0 422 56.4
Sopen11g006190 Solanum pennellii HOM05D006674 ORTHO05D007954 2.3e-86 323.6 425 55.1
Solyc11g011390.3 Solanum lycopersicum HOM05D006674 ORTHO05D007954 5.2e-86 322.4 426 54.9
Ca_17090_v3 Cicer arietinum L. HOM05D006674 ORTHO05D007954 2.0e-85 320.5 299 57.5
CiPaw.03G073400 Carya illinoinensis HOM05D006674 ORTHO05D007954 3.7e-84 316.2 333 65.8
ClCG05G010650 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.4e-83 314.3 336 53.9
Gohir.A07G073700 Gossypium hirsutum HOM05D006674 ORTHO05D007954 7.0e-83 312.0 426 54.9
Peaxi162Scf00562g00218 Petunia axillaris HOM05D006674 ORTHO05D007954 1.0e-81 308.1 276 73.9
Aqoxy5G02269 Aquilegia oxysepala HOM05D006674 ORTHO05D007954 3.9e-81 306.2 423 55.3
PGR004G1202 Punica granatum HOM05D006674 ORTHO05D007954 6.6e-81 305.4 386 48.4
HanXRQChr09g0259811 Helianthus annuus HOM05D006674 ORTHO05D007954 5.6e-80 302.4 416 54.1
THA.LOC104805245 Tarenaya hassleriana HOM05D006674 ORTHO05D007954 7.3e-80 302.0 428 52.1
Migut.H02229 Erythranthe guttata HOM05D006674 ORTHO05D007954 1.2e-79 301.2 419 53.0
CARHR215300 Cardamine hirsuta HOM05D006674 ORTHO05D007954 2.8e-79 300.1 322 49.1
CDE06G1904 Ceratophyllum demersum HOM05D006674 ORTHO05D007954 6.2e-79 298.9 426 52.1
AL7G46330 Arabidopsis lyrata HOM05D006674 ORTHO05D007954 2.3e-78 297.0 419 51.1
A04p10750 Brassica napus HOM05D006674 ORTHO05D007954 8.9e-78 295.0 436 49.8
BraA04t16739Z Brassica rapa HOM05D006674 ORTHO05D007954 4.4e-77 292.7 436 49.5
Carub.0007s3275 Capsella rubella HOM05D006674 ORTHO05D007954 4.4e-77 292.7 419 50.4
BolC4t26017H Brassica oleracea HOM05D006674 ORTHO05D007954 5.8e-77 292.4 436 49.5
Sabra04G0056300 Salix brachista HOM05D006674 ORTHO05D007954 6.4e-76 288.9 425 52.5
MELO3C031718.2 Cucumis melo HOM05D006674 ORTHO05D007954 4.1e-75 286.2 321 63.9
AUR62042219 Chenopodium quinoa HOM05D006674 ORTHO05D007954 5.4e-75 285.8 421 43.5
C04p44470 Brassica napus HOM05D006674 ORTHO05D007954 7.1e-75 285.4 437 49.2
CAN.G222.57 Capsicum annuum HOM05D006674 ORTHO05D007954 2.7e-74 283.5 273 56.0
SGA_v2.0_scaffold108G30962 Striga asiatica HOM05D006674 ORTHO05D007954 9.9e-69 265.0 422 50.0
Gorai.001G082800 Gossypium raimondii HOM05D006674 ORTHO05D007954 1.3e-68 264.6 426 50.7
Ciclev10011395m.g Citrus clementina HOM05D006674 ORTHO05D007954 1.9e-67 260.8 425 50.1
DCAR_016695 Daucus carota HOM05D006674 ORTHO05D007954 3.5e-66 256.5 239 74.5
Gohir.D07G078400 Gossypium hirsutum HOM05D006674 ORTHO05D007954 1.0e-65 255.0 426 49.8
Rhsim08G0019400 Rhododendron simsii HOM05D006674 ORTHO05D007954 3.0e-65 253.4 243 72.4
unitig_27.g24984 Utricularia gibba HOM05D006674 ORTHO05D007954 5.3e-62 242.7 437 46.5
ATR0753G123 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.9e-60 236.9 267 50.6
Os04g0278200 Oryza sativa ssp. japonica HOM05D006674 ORTHO05D007954 2.3e-49 200.7 239 64.4
Sabra04G0094200 Salix brachista HOM05D002338 ORTHO05D006102 9.6e-48 195.3 293 42.7
HPP92_002281 Vanilla planifolia HOM05D006674 ORTHO05D007954 1.1e-38 165.2 388 40.2
AT5G37590 Arabidopsis thaliana HOM05D006674 ORTHO05D007954 2.4e-38 164.1 419 39.1
Cpa.g.sc340.5 Carica papaya HOM05D006674 ORTHO05D007954 1.3e-31 141.7 183 43.2
CAN.G222.56 Capsicum annuum HOM05D006674 ORTHO05D007954 1.6e-31 141.4 140 85.0
SMO170G0006 Selaginella moellendorffii HOM05D005601 ORTHO05D007265 2.0e-29 134.4 418 36.6
PSO017G4728 Papaver somniferum HOM05D006674 ORTHO05D007954 4.2e-27 126.7 191 60.7
PSO478G0741 Papaver somniferum HOM05D006674 ORTHO05D007954 2.1e-26 124.4 191 60.2
SalBow1G3838 Salvia bowleyana HOM05D006674 ORTHO05D007954 1.4e-25 121.7 178 41.0
CAN.G691.5 Capsicum annuum HOM05D006674 ORTHO05D007954 6.7e-25 119.4 144 47.9
QL02p059314 Quercus lobata HOM05D006674 ORTHO05D007954 3.3e-24 117.1 175 45.1
Hma1.2p1_1214F.1_g267580 Hydrangea macrophylla HOM05D006674 ORTHO05D007954 1.5e-21 108.2 194 37.6
Mapoly0177s0018 Marchantia polymorpha HOM05D006674 ORTHO05D007954 7.7e-21 105.9 427 24.8
CAN.G222.66 Capsicum annuum HOM05D006674 ORTHO05D007954 1.4e-19 101.7 332 28.9
arahy.Tifrunner.gnm1.ann1.EIPD4W Arachis hypogaea HOM05D006674 ORTHO05D007954 2.1e-18 97.8 100 53.0
QL02p059277 Quercus lobata HOM05D006674 ORTHO05D007954 6.1e-18 96.3 98 89.8
FAN19G0964 Fragaria x ananassa HOM05D000564 ORTHO05D004145 1.8e-17 94.7 67 71.6
Zm00001eb221070 Zea mays HOM05D006674 ORTHO05D007954 2.6e-16 90.9 174 33.3
Glyma.08G281500 Glycine max HOM05D006674 ORTHO05D007954 5.7e-16 89.7 68 61.8
ATR0753G105 Amborella trichopoda HOM05D006674 ORTHO05D007954 2.2e-15 87.8 97 47.4
FAN26G0614 Fragaria x ananassa HOM05D006674 ORTHO05D007954 4.8e-15 86.7 48 87.5
CSS0022976 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.1e-14 85.5 49 85.7
Peaxi162Scf00562g00214 Petunia axillaris HOM05D006674 ORTHO05D007954 4.1e-14 83.6 87 50.6
SEGI_15610 Sequoiadendron giganteum HOM05D006674 ORTHO05D007954 2.6e-13 80.9 73 58.9
ClCG05G010660 Citrullus lanatus HOM05D006674 ORTHO05D007954 1.7e-12 78.2 47 78.7
Pp3c16_20720 Physcomitrium patens HOM05D006674 ORTHO05D007954 1.7e-12 78.2 48 72.9
Hund13087 Selenicereus undatus HOM05D006674 ORTHO05D007954 2.9e-12 77.4 142 38.7
QL02p059287 Quercus lobata HOM05D006674 ORTHO05D007954 4.2e-11 73.6 45 77.8
CBR_g12189 Chara braunii HOM05D000019 ORTHO05D000002 7.2e-11 72.8 46 71.7
arahy.Tifrunner.gnm1.ann1.UE2S4S Arachis hypogaea HOM05D006674 ORTHO05D007954 1.2e-10 72.0 46 69.6
CSS0039398 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 4.7e-10 70.1 48 70.8
CSS0023659 Camellia sinensis var. sinensis HOM05D006674 ORTHO05D007954 1.4e-09 68.6 42 78.6
Zm00001eb221050 Zea mays HOM05D006674 ORTHO05D007954 6.7e-09 66.2 46 71.7
Nitab4.5_0004239g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 2.0e-08 64.7 66 48.5
QL02p059301 Quercus lobata HOM05D006674 ORTHO05D012891 4.4e-08 63.5 184 30.4
Nitab4.5_0009075g0020 Nicotiana tabacum HOM05D006674 ORTHO05D007954 9.7e-08 62.4 88 40.9
Oeu058058.1 Olea europaea HOM05D013212 ORTHO05D007954 8.2e-07 59.3 81 42.0
arahy.Tifrunner.gnm1.ann1.N9UN2I Arachis hypogaea HOM05D000138 ORTHO05D000078 1.4e-06 58.5 61 55.7
MCO08G049 Micromonas commoda HOM05D006674 ORTHO05D007954 1.8e-06 58.2 48 58.3
arahy.Tifrunner.gnm1.ann1.MX1HDN Arachis hypogaea HOM05D006674 ORTHO05D007954 4.1e-06 57.0 42 61.9
arahy.Tifrunner.gnm1.ann1.PS0MXP Arachis hypogaea HOM05D006674 ORTHO05D007954 4.1e-06 57.0 42 61.9


User provided reference genes

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