Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G159700 Prunus persica HOM05D019108 ORTHO05D022647 7.9e-42 173.3 86 100.0
FvH4_5g22952 Fragaria vesca HOM05D019108 ORTHO05D000001 2.0e-21 105.5 76 68.4
Hma1.2p1_0775F.1_g216430 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.7e-21 103.6 70 70.0
Hma1.2p1_1750F.1_g300740 Hydrangea macrophylla HOM05D019108 ORTHO05D022647 2.5e-19 98.6 64 71.9
CSS0020427 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.0e-12 76.6 61 57.4
CSS0016795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-11 72.8 71 49.3
CSS0040971 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-11 72.8 61 55.7
CSS0004228 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.2e-11 71.2 59 55.9
MD11G1074500 Malus domestica HOM05D000002 ORTHO05D000001 1.8e-09 65.9 45 73.3
MD02G1295200 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-09 65.5 61 49.2
PSO170G2828 Papaver somniferum HOM05D000002 ORTHO05D000001 6.8e-09 63.9 74 41.9
Sed0007235 Sechium edule HOM05D000002 ORTHO05D000001 6.8e-09 63.9 62 48.4
PSO063G0686 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-08 63.2 74 43.2
PSO170G0950 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-08 63.2 71 45.1
PSO781G0062 Papaver somniferum HOM05D000002 ORTHO05D000001 1.2e-08 63.2 65 46.2
Prupe.1G219500 Prunus persica HOM05D000002 ORTHO05D000001 1.2e-08 63.2 77 45.5
SHI37457 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-08 62.8 61 42.6
FAN15G3607 Fragaria x ananassa HOM05D019108 ORTHO05D022647 2.0e-08 62.4 62 50.0
Sed0023100 Sechium edule HOM05D000002 ORTHO05D000001 2.0e-08 62.4 62 46.8
PSO170G1587 Papaver somniferum HOM05D000002 ORTHO05D000001 2.6e-08 62.0 59 49.2
PSO339G2587 Papaver somniferum HOM05D000002 ORTHO05D000001 2.6e-08 62.0 74 40.5
PSO832G3521 Papaver somniferum HOM05D000002 ORTHO05D000001 2.6e-08 62.0 74 41.9
SHI19884 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-08 62.0 62 43.5
FAN20G3004 Fragaria x ananassa HOM05D019108 ORTHO05D022647 3.4e-08 61.6 62 50.0
Ca_24102_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 4.4e-08 61.2 61 49.2
PSO210G4029 Papaver somniferum HOM05D000002 ORTHO05D000001 4.4e-08 61.2 61 45.9
PSO063G2322 Papaver somniferum HOM05D000002 ORTHO05D000001 5.7e-08 60.8 74 41.9
SHI01787 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-08 60.5 65 43.1
SHI02929 Sapria himalayana HOM05D000002 ORTHO05D000001 7.5e-08 60.5 61 41.0
THA.LOC104814053 Tarenaya hassleriana HOM05D000002 ORTHO05D000001 7.5e-08 60.5 61 49.2
AUR62027401 Chenopodium quinoa HOM05D000002 ORTHO05D000001 9.8e-08 60.1 73 49.3
Potri.011G016400 Populus trichocarpa HOM05D000097 ORTHO05D000041 9.8e-08 60.1 61 44.3
SHI11283 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-08 60.1 61 42.6
SHI37456 Sapria himalayana HOM05D000002 ORTHO05D000001 9.8e-08 60.1 61 41.0
FvH4_7g33701 Fragaria vesca HOM05D000002 ORTHO05D000001 1.3e-07 59.7 61 44.3
PSO017G5132 Papaver somniferum HOM05D000002 ORTHO05D000001 1.3e-07 59.7 61 44.3
SHI14662 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-07 59.7 77 37.7
Ca_19987_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.7e-07 59.3 61 47.5
Ca_26242_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000001 1.7e-07 59.3 61 47.5
SHI05498 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-07 59.3 69 36.2
SHI17313 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-07 59.3 61 39.3
SHI17759 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-07 59.3 61 39.3
SHI31472 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-07 59.3 61 41.0
CSS0000608 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.2e-07 58.9 74 43.2
PSO832G0380 Papaver somniferum HOM05D000002 ORTHO05D000001 2.2e-07 58.9 61 44.3
SHI03313 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-07 58.9 59 40.7
SHI05086 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-07 58.9 61 39.3
SHI18478 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-07 58.9 61 39.3
SHI20499 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-07 58.9 62 45.2
PSO013G0135 Papaver somniferum HOM05D000002 ORTHO05D000001 2.8e-07 58.5 61 45.9
SHI20723 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-07 58.5 61 44.3
AT1G48720 Arabidopsis thaliana HOM05D000002 ORTHO05D000001 3.7e-07 58.2 61 42.6
CANSAT21G0923 Cannabis sativa HOM05D000002 ORTHO05D000001 3.7e-07 58.2 61 44.3
PSO732G0520 Papaver somniferum HOM05D000002 ORTHO05D000001 3.7e-07 58.2 65 41.5
Hma1.2p1_0946F.1_g240340 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.9e-07 57.8 39 69.2
SHI29359 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-07 57.8 54 44.4
CSS0000779 Camellia sinensis var. sinensis HOM05D000006 ORTHO05D000001 6.3e-07 57.4 47 59.6
Dinv24351 Davidia involucrata HOM05D000097 ORTHO05D000041 6.3e-07 57.4 77 39.0
SHI09392 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-07 57.4 61 39.3
SHI12476 Sapria himalayana HOM05D000002 ORTHO05D000001 6.3e-07 57.4 61 45.9
Atru.chr3.4253 Acer truncatum HOM05D000264 ORTHO05D000152 8.3e-07 57.0 66 43.9
CiPaw.14G083000 Carya illinoinensis HOM05D000002 ORTHO05D000001 8.3e-07 57.0 72 37.5
Hma1.2p1_0467F.1_g158660 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.3e-07 57.0 70 38.6
SHI10925 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-07 57.0 76 40.8
SHI12969 Sapria himalayana HOM05D000002 ORTHO05D000001 8.3e-07 57.0 61 39.3
CANSAT35G1555 Cannabis sativa HOM05D000002 ORTHO05D000001 1.1e-06 56.6 71 42.3
SHI32573 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 56.6 61 44.3
SHI45229 Sapria himalayana HOM05D000002 ORTHO05D000001 1.1e-06 56.6 61 37.7
Sopen08g006540 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 56.6 62 41.9
CSS0046672 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.4e-06 56.2 60 40.0
Gorai.N009900 Gossypium raimondii HOM05D000002 ORTHO05D000001 1.4e-06 56.2 66 40.9
PSO832G1114 Papaver somniferum HOM05D000002 ORTHO05D000001 1.4e-06 56.2 74 39.2
SHI26299 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 56.2 77 37.7
SHI33540 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 56.2 60 40.0
SHI55107 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-06 56.2 54 44.4
TWI31G1144 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.4e-06 56.2 69 46.4
Ah.04g160170 Amaranthus hybridus HOM05D000002 ORTHO05D000001 1.8e-06 55.8 74 40.5
CSS0030598 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.8e-06 55.8 68 41.2
SHI16269 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 55.8 54 48.1
SHI18404 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-06 55.8 61 44.3
Migut.F01395 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.4e-06 55.5 62 43.5
SHI02822 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-06 55.5 61 36.1
SEGI_09407 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.4e-06 55.5 61 44.3
CANSAT54G0592 Cannabis sativa HOM05D000002 ORTHO05D000001 3.1e-06 55.1 71 39.4
TWI18G0957 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 3.1e-06 55.1 69 44.9
arahy.Tifrunner.gnm1.ann1.8W4KUS Arachis hypogaea HOM05D000097 ORTHO05D000041 4.1e-06 54.7 66 39.4
arahy.Tifrunner.gnm1.ann1.NKKF6S Arachis hypogaea HOM05D000097 ORTHO05D000041 4.1e-06 54.7 66 39.4
Manes.08G076035 Manihot esculenta HOM05D000002 ORTHO05D000001 4.1e-06 54.7 63 46.0
Manes.09G091166 Manihot esculenta HOM05D000002 ORTHO05D000001 4.1e-06 54.7 75 41.3
SHI23530 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-06 54.7 61 37.7
CSS0020078 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.4e-06 54.3 74 41.9
FvH4_1g02351 Fragaria vesca HOM05D000002 ORTHO05D000001 5.4e-06 54.3 70 44.3
SHI00045 Sapria himalayana HOM05D000002 ORTHO05D000001 5.4e-06 54.3 61 37.7
arahy.Tifrunner.gnm1.ann1.2M0S90 Arachis hypogaea HOM05D000097 ORTHO05D000041 7.0e-06 53.9 62 41.9
ECA233G2170 Erigeron canadensis HOM05D000002 ORTHO05D000001 7.0e-06 53.9 59 45.8
Gohir.D07G173601 Gossypium hirsutum HOM05D000002 ORTHO05D000001 7.0e-06 53.9 66 39.4
Hma1.2p1_0784F.1_g217250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.0e-06 53.9 68 36.8
Sed0018924 Sechium edule HOM05D000002 ORTHO05D000001 7.0e-06 53.9 62 38.7
Sopen09g024390 Solanum pennellii HOM05D000002 ORTHO05D000001 7.0e-06 53.9 73 47.9
CSS0030312 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.2e-06 53.5 74 40.5
Hma1.2p1_2987F.1_g331290 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.2e-06 53.5 83 38.6
SHI03433 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-06 53.5 61 37.7
SHI15966 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-06 53.5 61 39.3
SHI21150 Sapria himalayana HOM05D000002 ORTHO05D000001 9.2e-06 53.5 61 37.7
Sed0022174 Sechium edule HOM05D000002 ORTHO05D000001 9.2e-06 53.5 62 38.7


User provided reference genes

Program Settings