Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G158900 Prunus persica HOM05D006437 ORTHO05D007973 2.3e-59 231.9 105 100.0
RcHm_v2.0_Chr1g0370661 Rosa chinensis HOM05D006437 ORTHO05D007973 8.0e-28 127.1 67 83.6
FAN20G1691 Fragaria x ananassa HOM05D006874 ORTHO05D008334 5.2e-27 124.4 65 83.1
CANSAT78G0649 Cannabis sativa HOM05D006437 ORTHO05D007973 6.7e-27 124.0 70 82.9
FAN27G3274 Fragaria x ananassa HOM05D006437 ORTHO05D007973 6.7e-27 124.0 65 81.5
FAN15G1984 Fragaria x ananassa HOM05D006437 ORTHO05D007973 2.6e-26 122.1 65 80.0
CSS0043713 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.7e-25 119.4 63 77.8
Ciclev10013249m.g Citrus clementina HOM05D006437 ORTHO05D007973 3.7e-25 118.2 70 77.1
Dinv19010 Davidia involucrata HOM05D006437 ORTHO05D007973 3.7e-25 118.2 70 80.0
MD09G1261500 Malus domestica HOM05D006437 ORTHO05D007973 4.8e-25 117.9 60 85.0
Aqoxy5G01129 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 6.3e-25 117.5 70 72.9
CiPaw.03G068600 Carya illinoinensis HOM05D006437 ORTHO05D007973 6.3e-25 117.5 69 76.8
ECA238G0319 Erigeron canadensis HOM05D006437 ORTHO05D007973 8.2e-25 117.1 68 76.5
Medtr3g067715 Medicago truncatula HOM05D006437 ORTHO05D007973 1.8e-24 115.9 67 76.1
Lsat_1_v5_gn_2_81461 Lactuca sativa HOM05D006437 ORTHO05D007973 2.4e-24 115.5 68 75.0
Nn3g18216 Nelumbo nucifera HOM05D006437 ORTHO05D007973 3.1e-24 115.2 69 75.4
HanXRQChr07g0193741 Helianthus annuus HOM05D006437 ORTHO05D007973 4.1e-24 114.8 65 80.0
TPR.G15845 Trifolium pratense HOM05D006437 ORTHO05D007973 4.1e-24 114.8 61 80.3
Aqoxy7G00638 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 9.1e-24 113.6 70 74.3
PSO017G3771 Papaver somniferum HOM05D006437 ORTHO05D007973 1.2e-23 113.2 63 73.0
PSO478G0303 Papaver somniferum HOM05D006437 ORTHO05D007973 1.2e-23 113.2 63 73.0
QL11p004106 Quercus lobata HOM05D006437 ORTHO05D007973 1.2e-23 113.2 69 75.4
Ca_08164_v3 Cicer arietinum L. HOM05D006437 ORTHO05D007973 1.6e-23 112.8 61 78.7
PSO017G0604 Papaver somniferum HOM05D006437 ORTHO05D007973 1.6e-23 112.8 70 70.0
PSO478G4394 Papaver somniferum HOM05D006437 ORTHO05D007973 1.6e-23 112.8 70 70.0
SalBow7G1639 Salvia bowleyana HOM05D006437 ORTHO05D007973 1.6e-23 112.8 60 80.0
Zm00001eb158640 Zea mays HOM05D006437 ORTHO05D007973 1.6e-23 112.8 61 80.3
Cpa.g.sc604.3 Carica papaya HOM05D006437 ORTHO05D007973 2.0e-23 112.5 60 78.3
FvH4_5g32381 Fragaria vesca HOM05D006437 ORTHO05D007973 2.0e-23 112.5 58 82.8
Nn4g24140 Nelumbo nucifera HOM05D006437 ORTHO05D007973 2.7e-23 112.1 69 72.5
Lj6g0018768 Lotus japonicus HOM05D006437 ORTHO05D007973 3.5e-23 111.7 66 75.8
Medtr3g067720 Medicago truncatula HOM05D006437 ORTHO05D007973 3.5e-23 111.7 61 77.0
BcaC04g18789 Brassica carinata HOM05D006437 ORTHO05D007973 4.5e-23 111.3 61 78.7
DCAR_015248 Daucus carota HOM05D006437 ORTHO05D007973 4.5e-23 111.3 61 77.0
Migut.L00468 Erythranthe guttata HOM05D006437 ORTHO05D007973 4.5e-23 111.3 60 80.0
TAR629G2663 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.9e-23 110.9 69 73.9
TAR371G0259 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.7e-23 110.5 61 77.0
TAR371G1269 Trochodendron aralioides HOM05D006437 ORTHO05D007973 7.7e-23 110.5 61 77.0
GSVIVG01030860001 Vitis vinifera HOM05D006437 ORTHO05D007973 7.7e-23 110.5 69 73.9
Eucgr.F02822 Eucalyptus grandis HOM05D006437 ORTHO05D007973 1.0e-22 110.2 69 73.9
Nitab4.5_0004399g0060 Nicotiana tabacum HOM05D006437 ORTHO05D007973 1.0e-22 110.2 60 78.3
AUR62023192 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.3e-22 109.8 67 71.6
Haze_14223 Corylus avellana HOM05D006437 ORTHO05D007973 1.3e-22 109.8 67 74.6
Thecc.04G121100 Theobroma cacao HOM05D006437 ORTHO05D007973 1.3e-22 109.8 66 74.2
BcaC09g47742 Brassica carinata HOM05D006437 ORTHO05D007973 1.7e-22 109.4 61 75.4
A06p26360 Brassica napus HOM05D006437 ORTHO05D007973 1.7e-22 109.4 61 75.4
BNapus_Darmor_BZH_scaffold_162p00120 Brassica napus HOM05D006437 ORTHO05D007973 1.7e-22 109.4 61 75.4
BNapus_Darmor_BZH_scaffold_78p00110 Brassica napus HOM05D006437 ORTHO05D007973 1.7e-22 109.4 61 75.4
BolC1t05835H Brassica oleracea HOM05D006437 ORTHO05D007973 1.7e-22 109.4 61 75.4
BcaC05g30279 Brassica carinata HOM05D006437 ORTHO05D007973 2.2e-22 109.0 61 75.4
Lalb_Chr10g0104491 Lupinus albus HOM05D006437 ORTHO05D007973 2.2e-22 109.0 66 75.8
Potri.017G128600 Populus trichocarpa HOM05D006437 ORTHO05D007973 2.2e-22 109.0 70 71.4
Aa31LG5G13890 Aethionema arabicum HOM05D006437 ORTHO05D007973 2.9e-22 108.6 60 76.7
AL3G12980 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 2.9e-22 108.6 61 75.4
AT3G03341 Arabidopsis thaliana HOM05D006437 ORTHO05D007973 2.9e-22 108.6 61 75.4
Carub.0003s0252 Capsella rubella HOM05D006437 ORTHO05D007973 2.9e-22 108.6 61 75.4
CARHR077390 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.9e-22 108.6 61 75.4
Cfa007843 Carpinus fangiana HOM05D006437 ORTHO05D007973 2.9e-22 108.6 66 75.8
AUR62023239 Chenopodium quinoa HOM05D006437 ORTHO05D007973 2.9e-22 108.6 67 70.1
Thhalv10022211m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 2.9e-22 108.6 61 75.4
Manes.02G074600 Manihot esculenta HOM05D006437 ORTHO05D007973 2.9e-22 108.6 66 72.7
Phvul.001G231901 Phaseolus vulgaris HOM05D006437 ORTHO05D007973 2.9e-22 108.6 66 71.2
Sp3g02370 Schrenkiella parvula HOM05D006437 ORTHO05D007973 3.8e-22 108.2 61 73.8
Solyc02g091390.3 Solanum lycopersicum HOM05D006437 ORTHO05D007973 3.8e-22 108.2 60 76.7
Sopen02g036010 Solanum pennellii HOM05D006437 ORTHO05D007973 3.8e-22 108.2 60 76.7
PGSC0003DMG400030646 Solanum tuberosum HOM05D006437 ORTHO05D007973 3.8e-22 108.2 60 76.7
Cc07_g08170 Coffea canephora HOM05D006437 ORTHO05D007973 5.0e-22 107.8 60 75.0
MELO3C020290.2 Cucumis melo HOM05D006437 ORTHO05D007973 6.5e-22 107.5 69 69.6
Hma1.2p1_0832F.1_g225650 Hydrangea macrophylla HOM05D006437 ORTHO05D007973 6.5e-22 107.5 61 75.4
Carub.0006s1569 Capsella rubella HOM05D006437 ORTHO05D007973 8.5e-22 107.1 61 77.0
ClCG05G010950 Citrullus lanatus HOM05D006437 ORTHO05D007973 8.5e-22 107.1 69 71.0
Thhalv10015148m.g Eutrema salsugineum HOM05D006437 ORTHO05D007973 8.5e-22 107.1 61 73.8
Glyma.18G038851 Glycine max HOM05D006437 ORTHO05D007973 8.5e-22 107.1 66 71.2
Sed0002962 Sechium edule HOM05D006437 ORTHO05D007973 8.5e-22 107.1 65 72.3
AL6G28540 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 1.1e-21 106.7 61 75.4
PGR042G3666 Punica granatum HOM05D006437 ORTHO05D007973 1.1e-21 106.7 69 69.6
CSS0019264 Camellia sinensis var. sinensis HOM05D006437 ORTHO05D007973 1.5e-21 106.3 60 75.0
Glyma.11G218400 Glycine max HOM05D006437 ORTHO05D007973 1.5e-21 106.3 66 71.2
BraA01t04584Z Brassica rapa HOM05D006437 ORTHO05D007973 2.5e-21 105.5 61 73.8
CARHR195740 Cardamine hirsuta HOM05D006437 ORTHO05D007973 2.5e-21 105.5 61 75.4
BcaC09g47741 Brassica carinata HOM05D006437 ORTHO05D007973 3.2e-21 105.1 61 72.1
A10p21920 Brassica napus HOM05D006437 ORTHO05D007973 3.2e-21 105.1 59 76.3
Os01g0644200 Oryza sativa ssp. japonica HOM05D006437 ORTHO05D007973 3.2e-21 105.1 61 72.1
EL10Ac2g04484 Beta vulgaris HOM05D006437 ORTHO05D007973 4.2e-21 104.8 60 71.7
C09p59670 Brassica napus HOM05D006437 ORTHO05D007973 5.5e-21 104.4 58 77.6
BolC9t58806H Brassica oleracea HOM05D006437 ORTHO05D007973 5.5e-21 104.4 58 77.6
BraA10t44251Z Brassica rapa HOM05D006437 ORTHO05D007973 5.5e-21 104.4 58 77.6
AUR62023238 Chenopodium quinoa HOM05D006437 ORTHO05D007973 5.5e-21 104.4 60 71.7
THA.LOC104820840 Tarenaya hassleriana HOM05D006437 ORTHO05D007973 7.2e-21 104.0 60 73.3
AUR62023191 Chenopodium quinoa HOM05D006437 ORTHO05D007973 1.2e-20 103.2 60 71.7
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 1.6e-20 102.8 58 77.6
Lalb_Chr10g0104501 Lupinus albus HOM05D006437 ORTHO05D007973 4.7e-20 101.3 67 68.7
AL288U10020 Arabidopsis lyrata HOM05D006437 ORTHO05D007973 8.0e-20 100.5 61 73.8
Pp3c24_9690 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.4e-19 99.8 61 63.9
Mapoly0046s0059 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.0e-19 98.6 60 65.0
CsaV3_1G027840 Cucumis sativus L. HOM05D006437 ORTHO05D007973 4.0e-19 98.2 60 65.0
CsaV3_3G021640 Cucumis sativus L. HOM05D006437 ORTHO05D007973 4.0e-19 98.2 60 65.0
Peaxi162Scf00118g00018 Petunia axillaris HOM05D006437 ORTHO05D007973 5.2e-19 97.8 57 73.7
SMO111G0099 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 1.2e-18 96.7 61 65.6
Pp3c8_12730 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.6e-18 95.5 61 63.9
Pp3c8_12731 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.6e-18 95.5 61 63.9
Mapoly0046s0058 Marchantia polymorpha HOM05D006437 ORTHO05D007973 4.4e-18 94.7 61 67.2
Pp3c23_9530 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.4e-18 94.7 61 62.3
Aqoxy7G00636 Aquilegia oxysepala HOM05D006437 ORTHO05D007973 1.3e-17 93.2 54 74.1
Pp3c19_9840 Physcomitrium patens HOM05D006437 ORTHO05D007973 1.7e-17 92.8 61 60.7
Pp3c19_5460 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.2e-17 92.4 61 60.7
Pp3c19_5500 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.2e-17 92.4 61 60.7
Pp3c21_13210 Physcomitrium patens HOM05D006437 ORTHO05D007973 4.8e-17 91.3 61 59.0
SMO111G0160 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.3e-17 90.5 61 60.7
SMO111G0173 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.3e-17 90.5 61 60.7
SMO293G0011 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 8.3e-17 90.5 61 60.7
SEGI_27045 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 1.4e-16 89.7 60 60.0
Pp3c4_12160 Physcomitrium patens HOM05D006437 ORTHO05D007973 2.4e-16 89.0 60 61.7
SEGI_20637 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 5.4e-16 87.8 60 58.3
SMO111G0149 Selaginella moellendorffii HOM05D006437 ORTHO05D007973 9.1e-16 87.0 61 57.4
MELO3C020291.2 Cucumis melo HOM05D006437 ORTHO05D007973 2.0e-15 85.9 60 61.7
Mapoly0009s0147 Marchantia polymorpha HOM05D006437 ORTHO05D007973 3.5e-15 85.1 60 58.3
TAR371G0835 Trochodendron aralioides HOM05D006437 ORTHO05D007973 1.3e-14 83.2 47 72.3
Rhsim08G0086000 Rhododendron simsii HOM05D006437 ORTHO05D007973 1.5e-13 79.7 54 61.1
TAR371G0317 Trochodendron aralioides HOM05D006437 ORTHO05D007973 5.5e-13 77.8 46 69.6
SEGI_23307 Sequoiadendron giganteum HOM05D006437 ORTHO05D007973 8.0e-12 73.9 49 65.3
Cre03.g207152 Chlamydomonas reinhardtii HOM05D006437 ORTHO05D007973 5.0e-06 54.7 57 47.4


User provided reference genes

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