Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G158600 Prunus persica HOM05D003614 ORTHO05D004156 6.2e-44 180.3 82 100.0
MD12G1089700 Malus domestica HOM05D003614 ORTHO05D004156 1.1e-24 116.3 74 74.3
Prupe.7G047200 Prunus persica HOM05D003614 ORTHO05D004156 3.2e-24 114.8 70 78.6
RcHm_v2.0_Chr2g0124831 Rosa chinensis HOM05D003614 ORTHO05D004156 3.5e-23 111.3 74 71.6
FAN09G2704 Fragaria x ananassa HOM05D003614 ORTHO05D004156 1.8e-22 109.0 73 69.9
FvH4_6g25070 Fragaria vesca HOM05D003614 ORTHO05D004156 3.9e-22 107.8 73 68.5
FAN02G3060 Fragaria x ananassa HOM05D003614 ORTHO05D004156 3.9e-22 107.8 73 68.5
FAN14G1287 Fragaria x ananassa HOM05D003614 ORTHO05D004156 5.1e-22 107.5 73 67.1
GSVIVG01033568001 Vitis vinifera HOM05D003614 ORTHO05D004156 1.1e-19 99.8 74 64.9
Sc13g0001410 Simmondsia chinensis HOM05D003614 ORTHO05D004156 9.0e-19 96.7 74 62.2
CiPaw.09G043900 Carya illinoinensis HOM05D003614 ORTHO05D004156 1.2e-18 96.3 74 62.2
Haze_19741 Corylus avellana HOM05D003614 ORTHO05D004156 1.5e-18 95.9 74 64.9
CANSAT54G1064 Cannabis sativa HOM05D003614 ORTHO05D004156 2.0e-18 95.5 74 62.2
Ca_02700_v3 Cicer arietinum L. HOM05D003614 ORTHO05D004156 3.4e-18 94.7 74 62.2
Psat6g087880 Pisum sativum HOM05D003614 ORTHO05D004156 3.4e-18 94.7 74 60.8
Potri.006G043650 Populus trichocarpa HOM05D003614 ORTHO05D004156 3.4e-18 94.7 74 60.8
Nitab4.5_0010525g0010 Nicotiana tabacum HOM05D003614 ORTHO05D004156 4.5e-18 94.4 74 56.8
Dinv00797 Davidia involucrata HOM05D003614 ORTHO05D004156 5.8e-18 94.0 74 59.5
AUR62037179 Chenopodium quinoa HOM05D003614 ORTHO05D004156 1.3e-17 92.8 74 58.1
Atru.chr1.1276 Acer truncatum HOM05D003614 ORTHO05D004156 1.7e-17 92.4 74 56.8
COL.COLO4_33914 Corchorus olitorius HOM05D003614 ORTHO05D004156 1.7e-17 92.4 74 60.8
DCAR_016966 Daucus carota HOM05D003614 ORTHO05D004156 2.9e-17 91.7 73 56.2
Sabra06G0029800 Salix brachista HOM05D003614 ORTHO05D004156 4.9e-17 90.9 74 59.5
TPR.G13793 Trifolium pratense HOM05D003614 ORTHO05D004156 4.9e-17 90.9 74 60.8
TAR580G0003 Trochodendron aralioides HOM05D003614 ORTHO05D004156 4.9e-17 90.9 75 54.7
PGSC0003DMG400022532 Solanum tuberosum HOM05D003614 ORTHO05D004156 6.5e-17 90.5 74 54.1
Cfa016733 Carpinus fangiana HOM05D003614 ORTHO05D004156 8.4e-17 90.1 78 59.0
Rhsim03G0033800 Rhododendron simsii HOM05D003614 ORTHO05D004156 8.4e-17 90.1 74 58.1
arahy.Tifrunner.gnm1.ann1.MR16VB Arachis hypogaea HOM05D003614 ORTHO05D004156 1.4e-16 89.4 74 58.1
arahy.Tifrunner.gnm1.ann1.P66LNP Arachis hypogaea HOM05D003614 ORTHO05D004156 1.4e-16 89.4 74 58.1
CAN.G1237.32 Capsicum annuum HOM05D003614 ORTHO05D004156 1.9e-16 89.0 74 54.1
Nitab4.5_0005031g0070 Nicotiana tabacum HOM05D003614 ORTHO05D004156 2.5e-16 88.6 74 52.7
AUR62026155 Chenopodium quinoa HOM05D003614 ORTHO05D004156 5.5e-16 87.4 74 55.4
QL07p006066 Quercus lobata HOM05D003614 ORTHO05D004156 7.1e-16 87.0 73 58.9
QL07p006290 Quercus lobata HOM05D003614 ORTHO05D004156 7.1e-16 87.0 73 58.9
EL10Ac3g07183 Beta vulgaris HOM05D003614 ORTHO05D004156 9.3e-16 86.7 74 52.7
QL07p005711 Quercus lobata HOM05D003614 ORTHO05D004156 9.3e-16 86.7 73 57.5
CSS0031196 Camellia sinensis var. sinensis HOM05D003614 ORTHO05D004156 3.5e-15 84.7 74 55.4
Os06g0659200 Oryza sativa ssp. japonica HOM05D003614 ORTHO05D004156 3.5e-15 84.7 74 54.1
QL03p003469 Quercus lobata HOM05D003614 ORTHO05D004156 3.5e-15 84.7 75 53.3
QL03p003473 Quercus lobata HOM05D003614 ORTHO05D004156 3.5e-15 84.7 75 53.3
Glyma.16G116350 Glycine max HOM05D003614 ORTHO05D004156 4.6e-15 84.3 74 56.8
Glyma.16G222000 Glycine max HOM05D003614 ORTHO05D004156 4.6e-15 84.3 74 56.8
PGR142G0250 Punica granatum HOM05D003614 ORTHO05D004156 4.6e-15 84.3 74 52.7
vmacro23496 Vaccinium macrocarpon HOM05D003614 ORTHO05D004156 6.0e-15 84.0 74 55.4
VMungo0331G0942 Vigna mungo HOM05D003614 ORTHO05D004156 1.0e-14 83.2 74 55.4
PSO017G5444 Papaver somniferum HOM05D003614 ORTHO05D004156 1.3e-14 82.8 72 51.4
MBI14_g19444_MAGBIO Magnolia biondii HOM05D003614 ORTHO05D004156 1.8e-14 82.4 78 51.3
Actinidia39178 Actinidia chinensis HOM05D003614 ORTHO05D004156 3.0e-14 81.6 78 52.6
Solyc03g033520.2 Solanum lycopersicum HOM05D003614 ORTHO05D004156 3.0e-14 81.6 74 51.4
QL07p006078 Quercus lobata HOM05D003614 ORTHO05D004156 5.1e-14 80.9 73 53.4
TWI74G0330 Tripterygium wilfordii HOM05D003614 ORTHO05D004156 6.7e-14 80.5 74 50.0
Manes.08G056200 Manihot esculenta HOM05D003614 ORTHO05D004156 1.5e-13 79.3 74 51.4
Zm00001eb274760 Zea mays HOM05D003614 ORTHO05D004156 1.5e-13 79.3 78 51.3
Oeu008197.1 Olea europaea HOM05D003614 ORTHO05D004156 1.9e-13 79.0 74 50.0
Aqoxy5G04186 Aquilegia oxysepala HOM05D003614 ORTHO05D004156 2.5e-13 78.6 74 47.3
Lj1P1115T19 Lonicera japonica HOM05D003614 ORTHO05D004156 5.7e-13 77.4 78 46.2
ATR0580G046 Amborella trichopoda HOM05D003614 ORTHO05D004156 7.4e-13 77.0 68 52.9
Ah.13g076640 Amaranthus hybridus HOM05D003614 ORTHO05D004156 1.3e-12 76.3 77 50.6
MELO3C025378.2 Cucumis melo HOM05D003614 ORTHO05D004156 2.1e-12 75.5 74 45.9
CsaV3_3G005150 Cucumis sativus L. HOM05D003614 ORTHO05D004156 2.8e-12 75.1 74 45.9
AL6G13670 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 3.7e-12 74.7 70 45.7
THA.LOC104823214 Tarenaya hassleriana HOM05D003614 ORTHO05D004156 4.8e-12 74.3 70 44.3
Sp6g38700 Schrenkiella parvula HOM05D003614 ORTHO05D004156 1.1e-11 73.2 70 44.3
Carub.0006s0300 Capsella rubella HOM05D003614 ORTHO05D004156 1.4e-11 72.8 70 44.3
Sopen03g006270 Solanum pennellii HOM05D003614 ORTHO05D004156 1.4e-11 72.8 74 45.9
BcaC06g32109 Brassica carinata HOM05D003614 ORTHO05D004156 3.1e-11 71.6 70 42.9
C09p72780 Brassica napus HOM05D003614 ORTHO05D004156 3.1e-11 71.6 70 42.9
BolC9t60016H Brassica oleracea HOM05D003614 ORTHO05D004156 3.1e-11 71.6 70 42.9
Sed0022963 Sechium edule HOM05D003614 ORTHO05D004156 3.1e-11 71.6 74 43.2
Aa31LG1G21260 Aethionema arabicum HOM05D003614 ORTHO05D004156 5.3e-11 70.9 70 41.4
ClCG10G005410 Citrullus lanatus HOM05D003614 ORTHO05D004156 5.3e-11 70.9 74 44.6
Thhalv10012522m.g Eutrema salsugineum HOM05D003614 ORTHO05D004156 5.3e-11 70.9 70 42.9
A10p32060 Brassica napus HOM05D003614 ORTHO05D004156 6.9e-11 70.5 70 42.9
BraA10t45251Z Brassica rapa HOM05D003614 ORTHO05D004156 6.9e-11 70.5 70 42.9
ECA248G3258 Erigeron canadensis HOM05D003614 ORTHO05D004156 1.5e-10 69.3 72 40.3
SEGI_09252 Sequoiadendron giganteum HOM05D003614 ORTHO05D004156 5.8e-10 67.4 65 49.2
Duzib128G0580 Durio zibethinus HOM05D003614 ORTHO05D004156 8.4e-09 63.5 56 53.6
Dinv04144 Davidia involucrata HOM05D003614 ORTHO05D004156 2.1e-07 58.9 46 58.7
Nn1g04314 Nelumbo nucifera HOM05D003614 ORTHO05D004156 2.1e-07 58.9 49 53.1
HanXRQChr13g0395821 Helianthus annuus HOM05D003614 ORTHO05D004156 1.0e-06 56.6 72 36.1
unitig_748.g7231 Utricularia gibba HOM05D003614 ORTHO05D004156 3.0e-06 55.1 65 38.5
Rhsim10G0199100 Rhododendron simsii HOM05D003614 ORTHO05D004156 5.1e-06 54.3 44 54.5


User provided reference genes

Program Settings