Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G154500 Prunus persica HOM05D003775 ORTHO05D004314 3.8e-120 434.9 223 100.0
Prupe.2G027700 Prunus persica HOM05D003775 ORTHO05D004314 1.5e-60 236.9 171 79.5
Prupe.6G151000 Prunus persica HOM05D003775 ORTHO05D004314 4.4e-60 235.3 203 67.5
MD07G1027400 Malus domestica HOM05D003775 ORTHO05D004314 3.4e-44 182.6 174 62.6
MD02G1296700 Malus domestica HOM05D003775 ORTHO05D004314 5.1e-40 168.7 174 59.8
RcHm_v2.0_Chr1g0319451 Rosa chinensis HOM05D003775 ORTHO05D004314 1.2e-33 147.5 179 52.5
FvH4_7g02050 Fragaria vesca HOM05D003775 ORTHO05D004314 3.5e-25 119.4 179 44.1
FAN06G3050 Fragaria x ananassa HOM05D003775 ORTHO05D004314 4.6e-25 119.0 179 44.1
Cfa010842 Carpinus fangiana HOM05D003775 ORTHO05D004314 7.4e-23 111.7 174 47.1
FAN01G0886 Fragaria x ananassa HOM05D003775 ORTHO05D004314 1.3e-22 110.9 179 43.0
FAN10G1046 Fragaria x ananassa HOM05D003775 ORTHO05D004314 1.3e-22 110.9 167 43.1
Haze_03108 Corylus avellana HOM05D003775 ORTHO05D004314 1.4e-21 107.5 201 43.8
QL04p013175 Quercus lobata HOM05D003775 ORTHO05D004314 5.8e-20 102.1 173 41.6
CiPaw.14G005400 Carya illinoinensis HOM05D003775 ORTHO05D004314 3.8e-19 99.4 157 42.7
MD02G1296600 Malus domestica HOM05D003775 ORTHO05D004314 3.0e-16 89.7 138 46.4
Atru.chr11.2505 Acer truncatum HOM05D003775 ORTHO05D004314 1.8e-13 80.5 146 40.4
Thecc.10G005200 Theobroma cacao HOM05D003775 ORTHO05D004314 2.4e-13 80.1 162 37.0
Manes.04G163700 Manihot esculenta HOM05D003775 ORTHO05D004314 4.0e-13 79.3 139 38.1
Manes.11G002300 Manihot esculenta HOM05D003775 ORTHO05D004314 1.2e-12 77.8 144 38.2
Duzib106G0584 Durio zibethinus HOM05D003775 ORTHO05D004314 5.8e-12 75.5 129 41.1
Potri.003G202800 Populus trichocarpa HOM05D003775 ORTHO05D004314 1.3e-11 74.3 159 36.5
Duzib114G0793 Durio zibethinus HOM05D003775 ORTHO05D004314 1.7e-11 73.9 185 34.6
COL.COLO4_25844 Corchorus olitorius HOM05D003775 ORTHO05D004314 2.9e-11 73.2 145 37.2
Dinv39690 Davidia involucrata HOM05D003775 ORTHO05D004314 3.8e-11 72.8 144 38.2
Gohir.A06G159000 Gossypium hirsutum HOM05D003775 ORTHO05D004314 4.9e-11 72.4 180 34.4
Gohir.D06G164900 Gossypium hirsutum HOM05D003775 ORTHO05D004314 1.4e-10 70.9 178 36.0
Gorai.010G192300 Gossypium raimondii HOM05D003775 ORTHO05D004314 1.4e-10 70.9 178 36.0
Sabra03G0149800 Salix brachista HOM05D003775 ORTHO05D004314 1.4e-10 70.9 147 35.4
Dinv32058 Davidia involucrata HOM05D003775 ORTHO05D004314 1.9e-10 70.5 184 36.4
CSS0036530 Camellia sinensis var. sinensis HOM05D003775 ORTHO05D004314 3.2e-10 69.7 168 33.3
CSS0045062 Camellia sinensis var. sinensis HOM05D003775 ORTHO05D004314 3.2e-10 69.7 168 33.3
Glyma.09G225200 Glycine max HOM05D003775 ORTHO05D004314 5.5e-10 68.9 136 37.5
Nn3g16658 Nelumbo nucifera HOM05D003775 ORTHO05D004314 9.3e-10 68.2 103 41.7
Dinv00615 Davidia involucrata HOM05D003775 ORTHO05D004314 1.2e-09 67.8 142 38.0
TWI15G0411 Tripterygium wilfordii HOM05D003775 ORTHO05D004314 2.7e-09 66.6 157 32.5
TAR636G2085 Trochodendron aralioides HOM05D003775 ORTHO05D004314 2.7e-09 66.6 149 35.6
RcHm_v2.0_Chr5g0026451 Rosa chinensis HOM05D003775 ORTHO05D004314 3.5e-09 66.2 83 53.0
Sabra01G0017100 Salix brachista HOM05D003775 ORTHO05D004314 3.5e-09 66.2 149 35.6
Glyma.12G011800 Glycine max HOM05D003775 ORTHO05D004314 4.6e-09 65.9 108 43.5
Dinv04593 Davidia involucrata HOM05D003775 ORTHO05D004314 6.0e-09 65.5 166 36.1
PGR031G2286 Punica granatum HOM05D003775 ORTHO05D004314 6.0e-09 65.5 150 33.3
TWI63G1774 Tripterygium wilfordii HOM05D003775 ORTHO05D004314 7.9e-09 65.1 185 31.9
TAR633G1887 Trochodendron aralioides HOM05D003775 ORTHO05D004314 7.9e-09 65.1 149 34.9
arahy.Tifrunner.gnm1.ann1.F7MMZ3 Arachis hypogaea HOM05D003775 ORTHO05D004314 1.1e-07 61.2 150 35.3
Medtr2g060050 Medicago truncatula HOM05D003775 ORTHO05D004314 1.1e-07 61.2 164 32.3
VMungo1127G0258 Vigna mungo HOM05D003775 ORTHO05D004314 1.1e-07 61.2 134 34.3
Ciclev10031129m.g Citrus clementina HOM05D003775 ORTHO05D004314 1.5e-07 60.8 133 38.3
Ca_00245_v3 Cicer arietinum L. HOM05D003775 ORTHO05D004314 2.5e-07 60.1 141 36.9
Lalb_Chr01g0000591 Lupinus albus HOM05D003775 ORTHO05D004314 3.3e-07 59.7 140 36.4
Lalb_Chr19g0140171 Lupinus albus HOM05D003775 ORTHO05D004314 7.4e-07 58.5 164 34.1
Cpa.g.sc197.14 Carica papaya HOM05D003775 ORTHO05D004314 9.6e-07 58.2 144 33.3
Lj7C578T6 Lonicera japonica HOM05D003775 ORTHO05D004314 1.3e-06 57.8 195 33.3
arahy.Tifrunner.gnm1.ann1.IE4AJN Arachis hypogaea HOM05D003775 ORTHO05D004314 2.1e-06 57.0 93 43.0
Phvul.011G014600 Phaseolus vulgaris HOM05D003775 ORTHO05D004314 2.1e-06 57.0 134 31.3
GSVIVG01000859001 Vitis vinifera HOM05D003775 ORTHO05D004314 2.1e-06 57.0 145 35.2


User provided reference genes

Program Settings