Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G153600 Prunus persica HOM05D001521 ORTHO05D001342 5.5e-89 330.9 158 100.0
Prupe.3G153100 Prunus persica HOM05D001521 ORTHO05D001342 9.8e-46 187.2 161 59.6
Prupe.3G153300 Prunus persica HOM05D001521 ORTHO05D001342 2.8e-45 185.7 161 59.0
Prupe.5G237200 Prunus persica HOM05D001521 ORTHO05D001342 2.4e-44 182.6 160 61.2
MELO3C022450.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.5e-17 93.6 121 43.0
Hma1.2p1_0439F.1_g153190 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.9e-17 93.2 104 47.1
Sed0003936 Sechium edule HOM05D001521 ORTHO05D001342 3.3e-17 92.4 150 35.3
Hma1.2p1_1715F.1_g299020 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.8e-16 89.4 119 40.3
Sc19g0001570 Simmondsia chinensis HOM05D001521 ORTHO05D001342 4.7e-16 88.6 116 44.0
CsaV3_6G006750 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.1e-15 87.4 120 39.2
ClCG06G000900 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.4e-15 87.0 120 38.3
MELO3C022255.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.4e-15 87.0 154 35.1
Sed0017234 Sechium edule HOM05D001521 ORTHO05D001342 1.8e-15 86.7 119 38.7
Sed0023711 Sechium edule HOM05D001521 ORTHO05D001342 2.3e-15 86.3 133 36.1
Sed0024914 Sechium edule HOM05D001521 ORTHO05D001342 2.3e-15 86.3 119 42.0
CsaV3_6G008850 Cucumis sativus L. HOM05D001521 ORTHO05D001342 3.1e-15 85.9 148 35.8
Sed0028148 Sechium edule HOM05D001521 ORTHO05D001342 4.0e-15 85.5 119 39.5
Oeu035081.1 Olea europaea HOM05D001521 ORTHO05D001342 5.2e-15 85.1 101 44.6
Hma1.2p1_0225F.1_g094780 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 6.8e-15 84.7 99 42.4
Cpa.g.c44888 Carica papaya HOM05D001521 ORTHO05D001342 8.9e-15 84.3 116 38.8
Cpa.g.sc291.2 Carica papaya HOM05D001521 ORTHO05D001342 8.9e-15 84.3 116 38.8
Cpa.g.sc125.2 Carica papaya HOM05D001521 ORTHO05D001342 1.5e-14 83.6 116 38.8
Lj6P274T9 Lonicera japonica HOM05D001521 ORTHO05D001342 2.0e-14 83.2 99 44.4
GSVIVG01028606001 Vitis vinifera HOM05D001521 ORTHO05D001342 2.0e-14 83.2 99 41.4
Sed0017368 Sechium edule HOM05D001521 ORTHO05D001342 2.6e-14 82.8 121 38.0
GSVIVG01028618001 Vitis vinifera HOM05D001521 ORTHO05D001342 2.6e-14 82.8 99 41.4
Hma1.2p1_0033F.1_g020970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 3.4e-14 82.4 154 38.3
Hma1.2p1_0033F.1_g020980 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 3.4e-14 82.4 154 38.3
TAR371G0196 Trochodendron aralioides HOM05D001521 ORTHO05D001342 4.4e-14 82.0 99 42.4
TAR383G0835 Trochodendron aralioides HOM05D001521 ORTHO05D001342 4.4e-14 82.0 99 42.4
Sed0023613 Sechium edule HOM05D001521 ORTHO05D001342 7.5e-14 81.3 119 40.3
Rhsim01G0106900 Rhododendron simsii HOM05D000041 ORTHO05D000452 9.8e-14 80.9 101 42.6
Cpa.g.sc1831.1 Carica papaya HOM05D001521 ORTHO05D001342 1.3e-13 80.5 117 38.5
Cpa.g.sc264.8 Carica papaya HOM05D001521 ORTHO05D001342 1.3e-13 80.5 100 39.0
Lj1P1067T12 Lonicera japonica HOM05D001521 ORTHO05D001342 1.7e-13 80.1 99 41.4
Ah.13g075690 Amaranthus hybridus HOM05D001521 ORTHO05D001342 2.2e-13 79.7 103 44.7
CSS0010403 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 2.2e-13 79.7 120 39.2
Hma1.2p1_3600F.1_g336970 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 2.2e-13 79.7 151 35.8
Rhsim01G0107000 Rhododendron simsii HOM05D000041 ORTHO05D000061 2.2e-13 79.7 100 45.0
Rhsim08G0106700 Rhododendron simsii HOM05D000041 ORTHO05D000452 2.2e-13 79.7 100 45.0
GSVIVG01028617001 Vitis vinifera HOM05D001521 ORTHO05D001342 2.2e-13 79.7 100 40.0
CSS0039569 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 2.9e-13 79.3 121 38.8
Lj1C599T0 Lonicera japonica HOM05D001521 ORTHO05D001342 4.9e-13 78.6 103 37.9
ClCG06G001040 Citrullus lanatus HOM05D001521 ORTHO05D001342 6.4e-13 78.2 110 40.0
TAR636G2451 Trochodendron aralioides HOM05D001521 ORTHO05D001342 6.4e-13 78.2 100 41.0
Lj1C599T6 Lonicera japonica HOM05D001521 ORTHO05D001342 8.3e-13 77.8 103 36.9
Dinv12865 Davidia involucrata HOM05D001521 ORTHO05D001342 1.1e-12 77.4 99 42.4
Hma1.2p1_0439F.1_g153130 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 1.1e-12 77.4 151 35.1
Cpa.g.sc83.17 Carica papaya HOM05D001521 ORTHO05D001342 1.4e-12 77.0 116 36.2
MD03G1201400 Malus domestica HOM05D001521 ORTHO05D001342 1.4e-12 77.0 103 41.7
Cpa.g.sc264.7 Carica papaya HOM05D001521 ORTHO05D001342 1.9e-12 76.6 100 38.0
Cpa.g.sc83.19 Carica papaya HOM05D001521 ORTHO05D001342 1.9e-12 76.6 116 36.2
ClCG06G003010 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.9e-12 76.6 125 37.6
Lj1C599T5 Lonicera japonica HOM05D001521 ORTHO05D001342 1.9e-12 76.6 103 35.9
PSO541G4006 Papaver somniferum HOM05D001521 ORTHO05D001342 1.9e-12 76.6 124 35.5
Dinv37718 Davidia involucrata HOM05D001521 ORTHO05D001342 2.4e-12 76.3 99 40.4
Rhsim05G0009700 Rhododendron simsii HOM05D001521 ORTHO05D001342 3.2e-12 75.9 124 37.1
Cpa.g.sc567.1 Carica papaya HOM05D001521 ORTHO05D001342 4.1e-12 75.5 116 36.2
PSO541G4184 Papaver somniferum HOM05D001521 ORTHO05D001342 4.1e-12 75.5 124 37.9
MELO3C021142.2 Cucumis melo HOM05D001521 ORTHO05D001342 5.4e-12 75.1 130 33.8
Cpa.g.sc223.19 Carica papaya HOM05D001521 ORTHO05D001342 7.1e-12 74.7 105 38.1
Cpa.g.sc83.14 Carica papaya HOM05D001521 ORTHO05D001342 9.2e-12 74.3 116 35.3
Rhsim05G0009900 Rhododendron simsii HOM05D001521 ORTHO05D001342 9.2e-12 74.3 103 40.8
Rhsim08G0035600 Rhododendron simsii HOM05D001521 ORTHO05D001342 9.2e-12 74.3 118 36.4
Lj4P374T10 Lonicera japonica HOM05D001521 ORTHO05D001342 1.2e-11 73.9 105 43.8
EL10Ac9g22298 Beta vulgaris HOM05D001521 ORTHO05D001342 1.6e-11 73.6 98 40.8
AUR62011446 Chenopodium quinoa HOM05D001521 ORTHO05D001342 2.7e-11 72.8 102 39.2
Lj4P372T19 Lonicera japonica HOM05D001521 ORTHO05D001342 2.7e-11 72.8 99 42.4
EL10Ac9g21323 Beta vulgaris HOM05D001521 ORTHO05D001342 3.5e-11 72.4 98 40.8
Lj4P373T17 Lonicera japonica HOM05D001521 ORTHO05D001342 3.5e-11 72.4 99 42.4
RcHm_v2.0_Chr1g0336971 Rosa chinensis HOM05D001521 ORTHO05D001342 3.5e-11 72.4 122 36.1
CANSAT54G0874 Cannabis sativa HOM05D001521 ORTHO05D001342 4.6e-11 72.0 123 35.8
FAN13G1377 Fragaria x ananassa HOM05D001521 ORTHO05D001342 4.6e-11 72.0 104 36.5
Lj4P372T18 Lonicera japonica HOM05D001521 ORTHO05D001342 4.6e-11 72.0 98 40.8
Prupe.2G087400 Prunus persica HOM05D001521 ORTHO05D001342 4.6e-11 72.0 99 38.4
Rhsim05G0011800 Rhododendron simsii HOM05D001521 ORTHO05D001342 4.6e-11 72.0 106 38.7
TWI38G1624 Tripterygium wilfordii HOM05D001521 ORTHO05D001342 4.6e-11 72.0 98 37.8
ClCG06G003020 Citrullus lanatus HOM05D001521 ORTHO05D001342 6.0e-11 71.6 123 34.1
FvH4_7g07020 Fragaria vesca HOM05D001521 ORTHO05D001342 7.8e-11 71.2 105 39.0
FAN06G3326 Fragaria x ananassa HOM05D001521 ORTHO05D001342 7.8e-11 71.2 105 39.0
FAN10G4107 Fragaria x ananassa HOM05D001521 ORTHO05D001342 7.8e-11 71.2 105 39.0
Prupe.2G097700 Prunus persica HOM05D001521 ORTHO05D001342 7.8e-11 71.2 99 40.4
AUR62016615 Chenopodium quinoa HOM05D001521 ORTHO05D001342 1.0e-10 70.9 102 39.2
MD07G1171100 Malus domestica HOM05D001521 ORTHO05D001342 1.0e-10 70.9 110 34.5
CANSAT54G2115 Cannabis sativa HOM05D001521 ORTHO05D001342 1.3e-10 70.5 126 34.9
FAN08G2871 Fragaria x ananassa HOM05D000011 ORTHO05D002639 1.3e-10 70.5 140 30.7
Prupe.2G097800 Prunus persica HOM05D001521 ORTHO05D001342 1.3e-10 70.5 105 41.0
RcHm_v2.0_Chr2g0163661 Rosa chinensis HOM05D001521 ORTHO05D001342 1.3e-10 70.5 103 34.0
EL10Ac6g13883 Beta vulgaris HOM05D001521 ORTHO05D001342 2.3e-10 69.7 69 44.9
RcHm_v2.0_Chr2g0163631 Rosa chinensis HOM05D001521 ORTHO05D001342 2.3e-10 69.7 103 34.0
Ah.06g190240 Amaranthus hybridus HOM05D001521 ORTHO05D001342 3.0e-10 69.3 126 37.3
PSO339G3048 Papaver somniferum HOM05D001521 ORTHO05D001342 3.9e-10 68.9 128 36.7
EL10As2g23150 Beta vulgaris HOM05D001521 ORTHO05D001342 5.1e-10 68.6 69 44.9
FAN08G1602 Fragaria x ananassa HOM05D000011 ORTHO05D002639 5.1e-10 68.6 112 33.0
FvH4_7g07080 Fragaria vesca HOM05D001521 ORTHO05D001342 6.6e-10 68.2 122 40.2
RcHm_v2.0_Chr1g0337031 Rosa chinensis HOM05D001521 ORTHO05D001342 6.6e-10 68.2 109 38.5
Hund15934 Selenicereus undatus HOM05D001521 ORTHO05D001342 6.6e-10 68.2 99 38.4
MELO3C022434.2 Cucumis melo HOM05D001521 ORTHO05D001342 8.6e-10 67.8 104 40.4
CsaV3_6G006920 Cucumis sativus L. HOM05D001521 ORTHO05D001342 8.6e-10 67.8 101 41.6
PSO339G3460 Papaver somniferum HOM05D001521 ORTHO05D001342 8.6e-10 67.8 128 36.7
MELO3C022430.2 Cucumis melo HOM05D001521 ORTHO05D001342 1.1e-09 67.4 125 35.2
FAN08G1748 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.1e-09 67.4 112 33.0
FAN08G2683 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.1e-09 67.4 112 33.0
FAN08G3615 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.1e-09 67.4 112 33.0
FAN08G2489 Fragaria x ananassa HOM05D000011 ORTHO05D002639 1.5e-09 67.0 112 33.0
Lj9A162T18 Lonicera japonica HOM05D001521 ORTHO05D001342 1.5e-09 67.0 111 37.8
CsaV3_6G006950 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.9e-09 66.6 119 37.0
Dinv04994 Davidia involucrata HOM05D001521 ORTHO05D001342 2.5e-09 66.2 70 44.3
FAN13G2789 Fragaria x ananassa HOM05D001521 ORTHO05D001342 2.5e-09 66.2 103 38.8
PSO135G0667 Papaver somniferum HOM05D001521 ORTHO05D001342 2.5e-09 66.2 124 31.5
FvH4_6g45770 Fragaria vesca HOM05D001521 ORTHO05D001342 3.3e-09 65.9 125 34.4
MD01G1104300 Malus domestica HOM05D001521 ORTHO05D001342 3.3e-09 65.9 109 33.0
Rhsim05G0011600 Rhododendron simsii HOM05D001521 ORTHO05D001342 3.3e-09 65.9 107 37.4
RcHm_v2.0_Chr2g0163671 Rosa chinensis HOM05D001521 ORTHO05D001342 5.6e-09 65.1 120 32.5
Ah.13g067960 Amaranthus hybridus HOM05D001521 ORTHO05D001342 7.3e-09 64.7 112 33.0
CANSAT54G0766 Cannabis sativa HOM05D001521 ORTHO05D001342 7.3e-09 64.7 106 34.9
ECA248G2661 Erigeron canadensis HOM05D001521 ORTHO05D001342 7.3e-09 64.7 136 34.6
Lju124C11T1 Lonicera japonica HOM05D001521 ORTHO05D001342 7.3e-09 64.7 97 38.1
FvH4_5g17710 Fragaria vesca HOM05D001521 ORTHO05D001342 9.5e-09 64.3 103 37.9
FAN18G4180 Fragaria x ananassa HOM05D001521 ORTHO05D001342 9.5e-09 64.3 103 37.9
Sed0020102 Sechium edule HOM05D001521 ORTHO05D001342 9.5e-09 64.3 99 34.3
PSO063G1253 Papaver somniferum HOM05D001521 ORTHO05D001342 1.2e-08 63.9 99 34.3
RcHm_v2.0_Chr2g0163691 Rosa chinensis HOM05D001521 ORTHO05D001342 1.2e-08 63.9 107 33.6
ClCG03G004470 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.6e-08 63.5 96 37.5
FAN14G0309 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.6e-08 63.5 125 33.6
FAN04G1773 Fragaria x ananassa HOM05D001521 ORTHO05D001342 2.1e-08 63.2 103 36.9
RcHm_v2.0_Chr5g0072501 Rosa chinensis HOM05D001521 ORTHO05D001342 2.1e-08 63.2 91 33.0
Sed0026868 Sechium edule HOM05D001521 ORTHO05D001342 2.1e-08 63.2 102 40.2
AUR62011460 Chenopodium quinoa HOM05D001521 ORTHO05D001342 2.8e-08 62.8 102 34.3
CSS0049728 Camellia sinensis var. sinensis HOM05D001521 ORTHO05D001342 3.6e-08 62.4 73 42.5
FvH4_6g45591 Fragaria vesca HOM05D001521 ORTHO05D001342 3.6e-08 62.4 117 29.9
EL10Ac8g19842 Beta vulgaris HOM05D001521 ORTHO05D001342 4.7e-08 62.0 44 54.5
RcHm_v2.0_Chr2g0163741 Rosa chinensis HOM05D001521 ORTHO05D001342 8.1e-08 61.2 100 34.0
Sed0019348 Sechium edule HOM05D001521 ORTHO05D001342 8.1e-08 61.2 154 27.9
Sed0027182 Sechium edule HOM05D001521 ORTHO05D001342 8.1e-08 61.2 129 32.6
CsaV3_6G008840 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.1e-07 60.8 105 35.2
Lj4C373G0 Lonicera japonica HOM05D001521 ORTHO05D001342 1.1e-07 60.8 54 51.9
PSO031G0001 Papaver somniferum HOM05D001521 ORTHO05D001342 1.1e-07 60.8 128 35.2
PSO717G0052 Papaver somniferum HOM05D001521 ORTHO05D001342 1.1e-07 60.8 118 31.4
PSO717G0099 Papaver somniferum HOM05D001521 ORTHO05D001342 1.1e-07 60.8 118 31.4
PSO717G0140 Papaver somniferum HOM05D001521 ORTHO05D001342 1.1e-07 60.8 118 31.4
Rhsim05G0011700 Rhododendron simsii HOM05D001521 ORTHO05D001342 1.1e-07 60.8 72 40.3
ClCG06G001050 Citrullus lanatus HOM05D001521 ORTHO05D001342 1.4e-07 60.5 101 34.7
PSO017G3707 Papaver somniferum HOM05D001521 ORTHO05D001342 1.4e-07 60.5 118 31.4
PSO421G0707 Papaver somniferum HOM05D001521 ORTHO05D001342 1.4e-07 60.5 101 36.6
FAN05G0146 Fragaria x ananassa HOM05D001521 ORTHO05D001342 1.8e-07 60.1 124 29.0
MD02G1240200 Malus domestica HOM05D001521 ORTHO05D001342 1.8e-07 60.1 109 36.7
Prupe.2G097500 Prunus persica HOM05D001521 ORTHO05D001342 1.8e-07 60.1 108 35.2
PSO717G0066 Papaver somniferum HOM05D001521 ORTHO05D001342 2.3e-07 59.7 118 30.5
Cpa.g.c34789 Carica papaya HOM05D001521 ORTHO05D001342 3.1e-07 59.3 54 46.3
ClCG06G000920 Citrullus lanatus HOM05D001521 ORTHO05D001342 3.1e-07 59.3 126 30.2
FAN05G2842 Fragaria x ananassa HOM05D001521 ORTHO05D001342 3.1e-07 59.3 124 28.2
Rhsim05G0010000 Rhododendron simsii HOM05D001521 ORTHO05D001342 3.1e-07 59.3 74 39.2
Rhsim05G0011300 Rhododendron simsii HOM05D001521 ORTHO05D001342 3.1e-07 59.3 118 33.1
RcHm_v2.0_Chr2g0163591 Rosa chinensis HOM05D001521 ORTHO05D001342 3.1e-07 59.3 100 33.0
AUR62011447 Chenopodium quinoa HOM05D001521 ORTHO05D001342 4.0e-07 58.9 95 34.7
Dinv05622 Davidia involucrata HOM05D001521 ORTHO05D001342 4.0e-07 58.9 70 41.4
FAN09G4373 Fragaria x ananassa HOM05D001521 ORTHO05D001342 4.0e-07 58.9 103 35.0
Hma1.2p1_0189F.1_g082933 Hydrangea macrophylla HOM05D001521 ORTHO05D001342 4.0e-07 58.9 99 39.4
PSO409G0016 Papaver somniferum HOM05D001521 ORTHO05D001342 4.0e-07 58.9 100 33.0
PSO421G0572 Papaver somniferum HOM05D001521 ORTHO05D001342 4.0e-07 58.9 99 34.3
PSO421G0241 Papaver somniferum HOM05D001521 ORTHO05D001342 5.2e-07 58.5 100 34.0
PSO675G6111 Papaver somniferum HOM05D001521 ORTHO05D001342 5.2e-07 58.5 119 31.1
EL10Ac2g02860 Beta vulgaris HOM05D001521 ORTHO05D001342 6.8e-07 58.2 99 32.3
AUR62018482 Chenopodium quinoa HOM05D001521 ORTHO05D001342 6.8e-07 58.2 142 31.0
FAN09G4470 Fragaria x ananassa HOM05D001521 ORTHO05D001342 6.8e-07 58.2 95 29.5
Rhsim01G0221700 Rhododendron simsii HOM05D001521 ORTHO05D001342 6.8e-07 58.2 97 34.0
EL10Ac4g09242 Beta vulgaris HOM05D001521 ORTHO05D001342 8.9e-07 57.8 57 45.6
PSO832G0723 Papaver somniferum HOM05D001521 ORTHO05D001342 8.9e-07 57.8 118 30.5
PSO832G1357 Papaver somniferum HOM05D001521 ORTHO05D001342 8.9e-07 57.8 118 30.5
PSO832G4060 Papaver somniferum HOM05D001521 ORTHO05D001342 8.9e-07 57.8 118 30.5
RcHm_v2.0_Chr2g0163571 Rosa chinensis HOM05D001521 ORTHO05D001342 8.9e-07 57.8 100 34.0
Ah.06g190230 Amaranthus hybridus HOM05D001521 ORTHO05D001342 1.2e-06 57.4 102 35.3
EL10Ac1g00528 Beta vulgaris HOM05D001521 ORTHO05D001342 1.2e-06 57.4 103 35.9
CsaV3_6G006980 Cucumis sativus L. HOM05D001521 ORTHO05D001342 1.2e-06 57.4 101 37.6
Gohir.A02G009400 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.2e-06 57.4 124 32.3
Gohir.D02G009700 Gossypium hirsutum HOM05D001521 ORTHO05D001342 1.5e-06 57.0 126 33.3
Gorai.005G012000 Gossypium raimondii HOM05D001521 ORTHO05D001342 1.5e-06 57.0 126 33.3
MELO3C000313.2 Cucumis melo HOM05D001521 ORTHO05D001342 2.0e-06 56.6 57 42.1
Gohir.A02G009148 Gossypium hirsutum HOM05D001521 ORTHO05D001342 2.6e-06 56.2 125 35.2
PSO349G0188 Papaver somniferum HOM05D001521 ORTHO05D001342 2.6e-06 56.2 99 29.3
PSO349G0338 Papaver somniferum HOM05D001521 ORTHO05D001342 2.6e-06 56.2 99 29.3
ECA247G0917 Erigeron canadensis HOM05D001521 ORTHO05D001342 3.4e-06 55.8 111 34.2
Sed0024723 Sechium edule HOM05D001521 ORTHO05D001342 7.6e-06 54.7 102 28.4
Sed0017923 Sechium edule HOM05D001521 ORTHO05D001342 9.9e-06 54.3 102 28.4


User provided reference genes

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