Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 2.7e-65 251.9 130 100.0
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 3.3e-39 165.2 133 74.4
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 2.0e-36 156.0 136 72.1
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 2.1e-25 119.4 128 55.5
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.1e-22 109.4 133 49.6
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 4.7e-22 108.2 129 50.4
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 6.2e-22 107.8 120 51.7
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 8.1e-22 107.5 133 49.6
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 8.1e-22 107.5 133 49.6
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 3.1e-21 105.5 108 50.0
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 5.2e-21 104.8 120 52.5
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 1.2e-20 103.6 107 55.1
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.2e-20 103.6 120 51.7
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 2.0e-20 102.8 121 46.3
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 4.4e-20 101.7 128 50.0
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 4.4e-20 101.7 108 50.0
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.7e-19 99.8 128 48.4
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.7e-19 99.8 128 48.4
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 2.2e-19 99.4 127 50.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 2.2e-19 99.4 93 57.0
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 2.9e-19 99.0 104 53.8
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 1.4e-18 96.7 129 49.6
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.4e-18 96.7 112 50.9
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.9e-18 96.3 128 46.9
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 1.9e-18 96.3 129 46.5
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 2.4e-18 95.9 126 48.4
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.1e-17 92.8 131 44.3
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.3e-16 90.1 133 42.1
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.3e-16 90.1 134 47.8
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 3.0e-16 89.0 107 51.4
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.1e-16 88.2 125 46.4
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 5.1e-16 88.2 107 45.8
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 2.5e-15 85.9 125 44.8
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 2.5e-15 85.9 114 41.2
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 3.3e-15 85.5 133 45.9
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 4.3e-15 85.1 125 44.0
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 4.3e-15 85.1 119 48.7
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 5.6e-15 84.7 108 47.2
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 5.6e-15 84.7 130 41.5
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 9.6e-15 84.0 126 43.7
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 8.1e-14 80.9 124 46.0
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 8.1e-14 80.9 101 50.5
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 1.1e-13 80.5 132 40.2
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 1.8e-13 79.7 103 48.5
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 1.8e-13 79.7 112 42.9
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 6.9e-13 77.8 132 40.9
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 6.9e-13 77.8 129 43.4
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 6.9e-13 77.8 130 43.8
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 9.0e-13 77.4 124 37.9
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.2e-12 77.0 104 48.1
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 2.0e-12 76.3 131 38.9
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 4.4e-12 75.1 120 41.7
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 5.8e-12 74.7 130 39.2
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 1.3e-11 73.6 132 39.4
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 1.3e-11 73.6 132 39.4
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 2.9e-11 72.4 118 42.4
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 3.8e-11 72.0 97 45.4
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 6.4e-11 71.2 104 41.3
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.1e-10 70.5 125 39.2
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 1.1e-10 70.5 104 42.3
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.9e-10 69.7 103 42.7
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.9e-10 69.7 103 42.7
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 3.2e-10 68.9 125 40.0
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.2e-10 68.9 126 39.7
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.2e-10 68.6 133 37.6
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 7.1e-10 67.8 118 40.7
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 9.3e-10 67.4 124 37.1
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 1.2e-09 67.0 103 41.7
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 1.2e-09 67.0 103 41.7
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 6.0e-09 64.7 125 35.2
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.9e-08 62.0 127 38.6
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 3.9e-08 62.0 110 36.4
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 5.1e-08 61.6 120 35.8
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 5.1e-08 61.6 97 41.2
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 1.1e-07 60.5 128 33.6
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 3.3e-07 58.9 59 45.8
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 4.3e-07 58.5 102 33.3
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 7.3e-07 57.8 76 47.4
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 7.3e-07 57.8 96 38.5
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 9.6e-07 57.4 113 42.5
QL01p002403 Quercus lobata HOM05D006556 ORTHO05D008146 9.6e-07 57.4 91 41.8
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.3e-06 57.0 59 50.8
QL02p049171 Quercus lobata HOM05D007637 ORTHO05D009508 1.3e-06 57.0 69 43.5
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.3e-06 57.0 115 40.0
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 6.2e-06 54.7 124 34.7
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 8.1e-06 54.3 127 33.9


User provided reference genes

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