Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G134900 Prunus persica HOM05D020475 ORTHO05D010747 6.0e-113 411.4 296 100.0
MD09G1241900 Malus domestica HOM05D020475 ORTHO05D010747 6.1e-41 172.2 311 52.7
FAN14G3778 Fragaria x ananassa HOM05D020475 ORTHO05D010747 9.1e-21 105.1 331 38.7
QL08p040130 Quercus lobata HOM05D008876 ORTHO05D010747 1.2e-20 104.8 304 54.3
Medtr2g090660 Medicago truncatula HOM05D008876 ORTHO05D010747 4.5e-20 102.8 302 36.4
FvH4_6g26650 Fragaria vesca HOM05D020475 ORTHO05D010747 5.9e-20 102.4 340 37.1
FAN02G4612 Fragaria x ananassa HOM05D020475 ORTHO05D022619 6.5e-19 99.0 341 34.3
CiPaw.03G181200 Carya illinoinensis HOM05D008876 ORTHO05D010747 2.8e-17 93.6 289 47.8
Glyma.13G294400 Glycine max HOM05D008876 ORTHO05D010747 6.1e-17 92.4 315 40.6
FAN09G4445 Fragaria x ananassa HOM05D020475 ORTHO05D022619 1.2e-15 88.2 326 38.0
Ciclev10016096m.g Citrus clementina HOM05D008876 ORTHO05D010747 7.5e-15 85.5 313 44.7
Manes.12G089700 Manihot esculenta HOM05D008876 ORTHO05D010747 3.7e-14 83.2 291 37.8
TPR.G6423 Trifolium pratense HOM05D008876 ORTHO05D010747 7.0e-13 79.0 314 43.9
Phvul.005G100800 Phaseolus vulgaris HOM05D008876 ORTHO05D010747 2.7e-12 77.0 352 42.9
Ca_01482_v3 Cicer arietinum L. HOM05D008876 ORTHO05D010747 7.8e-12 75.5 301 37.9
Glyma.12G206500 Glycine max HOM05D008876 ORTHO05D010747 6.6e-11 72.4 312 47.1
Potri.017G015700 Populus trichocarpa HOM05D008876 ORTHO05D010747 3.3e-10 70.1 165 43.0
Duzib132G0209 Durio zibethinus HOM05D008876 ORTHO05D010747 5.6e-10 69.3 308 39.0
Duzib132G0342 Durio zibethinus HOM05D008876 ORTHO05D010747 5.6e-10 69.3 308 39.0
Psat5g273640 Pisum sativum HOM05D008876 ORTHO05D010747 4.7e-09 66.2 300 43.0
Lj3g0013370 Lotus japonicus HOM05D008876 ORTHO05D010747 8.0e-09 65.5 305 38.4
Lalb_Chr22g0356741 Lupinus albus HOM05D008876 ORTHO05D010747 1.0e-08 65.1 305 38.0
CANSAT64G2321 Cannabis sativa HOM05D025247 ORTHO05D010747 1.8e-08 64.3 327 28.7
Thecc.02G185800 Theobroma cacao HOM05D008876 ORTHO05D010747 1.8e-08 64.3 308 39.9
COL.COLO4_35512 Corchorus olitorius HOM05D008876 ORTHO05D010747 3.0e-08 63.5 318 34.9
Sed0016021 Sechium edule HOM05D023055 ORTHO05D010747 3.0e-08 63.5 290 40.7
Cfa014657 Carpinus fangiana HOM05D008876 ORTHO05D010747 2.0e-07 60.8 191 47.6
Actinidia11002 Actinidia chinensis HOM05D008876 ORTHO05D010747 2.6e-07 60.5 77 53.2
Atru.chr6.2872 Acer truncatum HOM05D008876 ORTHO05D010747 4.4e-07 59.7 140 47.1
MELO3C018867.2 Cucumis melo HOM05D023055 ORTHO05D010747 1.7e-06 57.8 290 33.4
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 2.2e-06 57.4 59 47.5
Actinidia11106 Actinidia chinensis HOM05D008876 ORTHO05D010747 8.3e-06 55.5 74 48.6


User provided reference genes

Program Settings