Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 7.5e-168 594.0 344 100.0
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 2.9e-135 485.7 346 83.5
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.3e-127 460.3 344 77.9
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 4.9e-127 458.4 344 77.6
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 4.9e-127 458.4 344 77.6
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.0e-124 450.7 342 76.9
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 2.3e-124 449.5 344 74.7
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 2.5e-118 429.5 344 74.1
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 1.5e-115 420.2 344 73.0
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 2.0e-112 409.8 344 61.6
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 2.7e-109 399.4 344 61.3
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 3.6e-109 399.1 344 61.6
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 7.9e-109 397.9 342 69.0
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 1.4e-108 397.1 346 70.2
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 2.0e-107 393.3 344 67.4
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 3.3e-107 392.5 344 61.9
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 2.8e-106 389.4 339 68.1
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 1.1e-105 387.5 344 70.1
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 5.3e-105 385.2 344 65.4
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 1.5e-104 383.6 344 68.6
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 2.6e-104 382.9 345 63.8
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 1.7e-103 380.2 339 64.9
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 2.2e-103 379.8 337 63.8
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 2.2e-103 379.8 345 58.3
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 2.9e-103 379.4 305 75.7
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 6.5e-103 378.3 344 66.0
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 4.2e-102 375.6 343 65.6
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 6.1e-101 371.7 344 66.9
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.0e-100 370.9 338 58.3
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 1.8e-100 370.2 350 69.4
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 1.5e-99 367.1 327 70.6
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 5.7e-99 365.2 344 66.3
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 1.3e-98 364.0 345 57.4
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 2.8e-98 362.8 327 57.8
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 2.4e-97 359.8 331 67.7
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 7.0e-97 358.2 344 55.8
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 4.5e-96 355.5 344 55.8
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 4.5e-96 355.5 344 55.5
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 1.3e-95 354.0 350 56.0
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 1.7e-95 353.6 340 65.6
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 2.9e-95 352.8 342 56.7
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 3.8e-95 352.4 344 56.1
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 3.8e-95 352.4 299 59.9
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 5.0e-95 352.1 317 58.4
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 1.1e-94 350.9 344 66.3
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 3.2e-94 349.4 343 64.7
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 3.2e-94 349.4 316 55.4
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 4.2e-94 349.0 317 58.0
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 7.2e-94 348.2 316 57.9
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 7.2e-94 348.2 329 65.7
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 8.0e-93 344.7 330 56.1
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 3.0e-92 342.8 338 56.2
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 3.0e-92 342.8 344 58.7
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 4.0e-92 342.4 324 55.9
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 2.6e-91 339.7 318 67.9
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 2.6e-91 339.7 318 67.6
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 7.5e-91 338.2 318 67.9
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 9.7e-91 337.8 318 67.3
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 9.7e-91 337.8 344 58.4
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 4.8e-90 335.5 318 67.0
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 6.3e-90 335.1 324 67.6
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 2.4e-89 333.2 317 66.9
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 2.4e-89 333.2 315 65.1
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 4.1e-89 332.4 339 62.8
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 9.1e-89 331.3 326 53.7
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 2.7e-88 329.7 344 63.4
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 4.5e-88 328.9 317 65.6
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 1.0e-87 327.8 317 62.1
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 1.0e-87 327.8 318 66.7
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 1.0e-87 327.8 318 66.7
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 1.9e-86 323.6 318 66.0
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 7.2e-86 321.6 318 66.0
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 1.6e-85 320.5 318 65.7
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 6.1e-85 318.5 346 49.7
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.8e-84 317.0 323 61.6
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 9.8e-83 311.2 341 50.1
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 1.1e-81 307.8 355 50.4
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 1.6e-80 303.9 346 47.4
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 4.5e-80 302.4 345 49.3
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 1.0e-79 301.2 345 48.4
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 2.9e-79 299.7 345 49.6
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 2.5e-78 296.6 345 49.6
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 4.7e-77 292.4 345 47.2
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 6.1e-77 292.0 333 50.8
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 8.3e-74 281.6 330 47.3
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 1.8e-73 280.4 317 57.4
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 1.7e-71 273.9 319 46.7
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 2.8e-69 266.5 322 58.7
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 1.4e-68 264.2 269 52.0
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.4e-65 254.2 231 71.4
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 1.3e-63 247.7 346 41.9
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 4.4e-59 232.6 169 69.2
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 1.7e-55 220.7 179 64.2
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 2.0e-51 207.2 190 58.4
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 1.3e-39 167.9 113 69.0
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 9.6e-38 161.8 179 53.1
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 3.4e-35 153.3 102 68.6
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 3.0e-31 140.2 98 67.3
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.1e-30 138.3 113 60.2
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 4.0e-28 129.8 178 44.9
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 9.0e-28 128.6 183 59.6
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 8.4e-18 95.5 138 44.2
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 9.3e-17 92.0 101 47.5
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 6.2e-13 79.3 77 57.1
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 4.0e-12 76.6 110 45.5


User provided reference genes

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