Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 6.5e-188 660.6 340 100.0
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 1.4e-169 599.7 334 91.3
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 8.8e-169 597.0 334 90.4
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 1.9e-155 552.7 342 84.2
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 9.4e-155 550.4 344 82.8
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 5.4e-150 534.6 356 79.8
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 9.5e-147 523.9 375 75.7
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 3.9e-140 501.9 332 76.5
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 6.6e-140 501.1 332 76.5
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 8.6e-140 500.7 337 76.0
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 2.8e-138 495.7 339 76.7
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 8.3e-135 484.2 340 72.4
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 9.2e-134 480.7 346 72.3
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 3.5e-133 478.8 327 73.1
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 2.3e-132 476.1 334 71.9
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 3.9e-132 475.3 335 71.9
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 1.2e-130 470.3 334 70.7
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 4.7e-130 468.4 302 81.1
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 1.1e-129 467.2 344 70.9
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 2.6e-128 462.6 340 71.5
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 2.6e-128 462.6 369 68.0
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 1.7e-127 459.9 339 71.7
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 6.4e-127 458.0 345 68.4
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 6.0e-125 451.4 330 70.3
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 3.0e-124 449.1 340 68.5
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 1.1e-123 447.2 337 68.8
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 1.9e-123 446.4 337 68.5
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 1.9e-123 446.4 340 68.2
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 2.5e-123 446.0 344 66.0
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 3.3e-123 445.7 336 68.8
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 3.3e-123 445.7 335 69.6
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 9.5e-123 444.1 338 67.5
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 1.6e-122 443.4 337 69.1
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 2.8e-122 442.6 341 66.3
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 2.8e-122 442.6 344 68.0
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 4.7e-122 441.8 338 66.9
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 8.1e-122 441.0 302 74.2
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 1.8e-121 439.9 334 67.7
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 1.8e-121 439.9 340 70.0
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 1.8e-121 439.9 326 70.9
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 2.3e-121 439.5 342 66.7
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 3.1e-121 439.1 340 67.4
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 3.1e-121 439.1 336 67.3
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 4.0e-121 438.7 336 69.3
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 5.8e-120 434.9 340 67.1
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 7.6e-120 434.5 343 66.2
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 7.6e-120 434.5 343 66.2
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 1.3e-119 433.7 335 67.2
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 2.9e-119 432.6 332 68.4
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 2.9e-119 432.6 343 64.7
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 6.4e-119 431.4 348 66.7
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 6.4e-119 431.4 343 65.3
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 6.4e-119 431.4 331 67.7
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 8.3e-119 431.0 343 65.0
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 8.3e-119 431.0 337 62.0
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 8.3e-119 431.0 352 63.9
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 1.4e-118 430.3 336 65.2
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 1.4e-118 430.3 335 64.8
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 2.4e-118 429.5 349 66.8
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 4.1e-118 428.7 349 66.8
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 9.2e-118 427.6 348 66.1
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 9.2e-118 427.6 349 66.2
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 1.6e-117 426.8 348 63.8
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 6.0e-117 424.9 354 64.4
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 1.0e-116 424.1 342 66.7
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 1.3e-116 423.7 360 61.1
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 1.7e-116 423.3 337 66.8
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 5.1e-116 421.8 331 66.5
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 4.3e-115 418.7 344 64.0
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 1.2e-114 417.2 335 66.9
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 4.7e-114 415.2 320 69.1
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 1.1e-113 414.1 327 66.1
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 7.6e-112 407.9 335 65.1
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 1.7e-111 406.8 335 65.4
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 2.9e-111 406.0 340 63.2
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 5.4e-110 401.7 304 68.1
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.2e-109 400.6 346 63.9
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 1.6e-109 400.2 296 68.6
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 4.8e-106 388.7 330 61.8
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 8.1e-106 387.9 323 61.9
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 5.4e-102 375.2 348 58.9
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 4.6e-101 372.1 336 62.2
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 3.0e-100 369.4 275 68.7
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 5.6e-99 365.2 349 58.7
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 1.6e-98 363.6 349 58.7
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 2.6e-96 356.3 273 67.8
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 9.3e-94 347.8 265 67.5
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 4.6e-93 345.5 320 59.1
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 5.1e-92 342.0 348 56.6
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 2.8e-90 336.3 324 59.3
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 6.2e-90 335.1 412 49.3
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 2.0e-88 330.1 277 64.6
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 1.2e-85 320.9 255 67.8
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 1.3e-84 317.4 233 68.2
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 1.6e-82 310.5 227 69.2
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 2.0e-80 303.5 332 53.9
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 3.4e-80 302.8 233 67.8
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 3.2e-78 296.2 391 46.0
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 1.2e-77 294.3 245 64.1
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 1.6e-74 283.9 332 50.3
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 4.8e-74 282.3 306 52.6
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 2.2e-71 273.5 323 50.2
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 9.7e-67 258.1 179 70.4
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 7.9e-61 238.4 184 68.5
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 3.3e-59 233.0 185 67.0
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 1.3e-58 231.1 278 47.5
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 2.2e-55 220.3 333 42.0
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 5.0e-55 219.2 253 50.2
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 1.3e-47 194.5 249 47.8
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 2.0e-35 154.1 93 79.6
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 4.0e-28 129.8 113 60.2
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 1.7e-26 124.4 88 67.0
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 2.2e-26 124.0 76 76.3
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 1.3e-23 114.8 90 63.3
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 5.0e-23 112.8 279 31.5
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 1.9e-22 110.9 90 62.2
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 6.8e-20 102.4 256 32.4
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 2.9e-18 97.1 60 73.3
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 1.1e-14 85.1 241 30.7
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 5.6e-14 82.8 78 56.4
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 2.3e-12 77.4 54 70.4
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 2.3e-12 77.4 54 70.4
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 2.7e-08 63.9 47 66.0
SMO338G0026 Selaginella moellendorffii HOM05D005386 ORTHO05D006981 2.5e-06 57.4 175 29.1


User provided reference genes

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