Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G110500 Prunus persica HOM05D000007 ORTHO05D029697 3.3e-89 331.6 162 100.0
RcHm_v2.0_Chr2g0131131 Rosa chinensis HOM05D000007 ORTHO05D000521 1.1e-20 104.0 77 62.3
Prupe.3G112400 Prunus persica HOM05D000007 ORTHO05D000521 1.9e-20 103.2 96 57.3
MD17G1263300 Malus domestica HOM05D000007 ORTHO05D000521 1.0e-18 97.4 78 60.3
MD01G1181800 Malus domestica HOM05D000007 ORTHO05D000521 1.2e-17 94.0 79 57.0
Rhsim01G0071800 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.0e-17 93.2 73 63.0
Rhsim07G0064600 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.4e-17 92.4 73 63.0
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 4.4e-17 92.0 73 61.6
Rhsim01G0070300 Rhododendron simsii HOM05D000007 ORTHO05D000521 5.7e-17 91.7 142 41.5
Rhsim01G0072600 Rhododendron simsii HOM05D000007 ORTHO05D000521 7.5e-17 91.3 73 61.6
Rhsim07G0064700 Rhododendron simsii HOM05D000007 ORTHO05D000521 9.8e-17 90.9 73 61.6
RhsimUnG0082800 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.2e-16 89.7 86 54.7
Rhsim01G0070100 Rhododendron simsii HOM05D000007 ORTHO05D013865 2.8e-16 89.4 73 60.3
Rhsim07G0064500 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.7e-16 89.0 73 58.9
CANSAT64G2796 Cannabis sativa HOM05D000007 ORTHO05D000676 9.1e-15 84.3 70 58.6
CANSAT64G2453 Cannabis sativa HOM05D000007 ORTHO05D000521 5.9e-14 81.6 69 58.0
Hma1.2p1_1251F.1_g270320 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 5.9e-14 81.6 97 43.3
Hma1.2p1_0270F.1_g108160 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 1.7e-13 80.1 80 51.2
Rhsim07G0063500 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.7e-13 80.1 95 44.2
Dinv34341 Davidia involucrata HOM05D000007 ORTHO05D000521 2.9e-13 79.3 94 43.6
Dinv34353 Davidia involucrata HOM05D000007 ORTHO05D000521 8.5e-13 77.8 79 48.1
RhsimUnG0082900 Rhododendron simsii HOM05D000007 ORTHO05D013865 1.5e-12 77.0 112 44.6
FvH4_6g28330 Fragaria vesca HOM05D000007 ORTHO05D000676 9.5e-12 74.3 81 53.1
FAN02G0113 Fragaria x ananassa HOM05D000007 ORTHO05D000521 9.5e-12 74.3 81 53.1
CANSAT11G1035 Cannabis sativa HOM05D000007 ORTHO05D000676 1.2e-11 73.9 79 50.6
FAN05G3533 Fragaria x ananassa HOM05D018771 ORTHO05D029697 3.6e-11 72.4 108 41.7
Haze_08061 Corylus avellana HOM05D000007 ORTHO05D000521 1.0e-10 70.9 79 48.1
FAN14G1599 Fragaria x ananassa HOM05D018771 ORTHO05D000521 1.2e-09 67.4 79 43.0
Prupe.3G112000 Prunus persica HOM05D000007 ORTHO05D000521 3.4e-09 65.9 95 40.0
Lalb_Chr17g0348371 Lupinus albus HOM05D000007 ORTHO05D000521 7.5e-09 64.7 79 44.3
Thecc.08G139900 Theobroma cacao HOM05D023714 ORTHO05D025667 9.8e-09 64.3 74 44.6
TPR.G17766 Trifolium pratense HOM05D000007 ORTHO05D000521 1.3e-08 63.9 90 40.0
CANSAT64G1494 Cannabis sativa HOM05D000007 ORTHO05D000521 1.7e-08 63.5 75 45.3
FAN02G2781 Fragaria x ananassa HOM05D000007 ORTHO05D029697 1.7e-08 63.5 55 52.7
Prupe.3G112200 Prunus persica HOM05D000007 ORTHO05D000521 1.7e-08 63.5 95 38.9
Cfa012599 Carpinus fangiana HOM05D000007 ORTHO05D000521 2.2e-08 63.2 74 47.3
TPR.G13072 Trifolium pratense HOM05D000007 ORTHO05D000521 2.4e-07 59.7 75 41.3
Medtr5g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 4.1e-07 58.9 74 44.6
TPR.G29403 Trifolium pratense HOM05D000007 ORTHO05D000521 4.1e-07 58.9 122 32.0
TPR.G18189 Trifolium pratense HOM05D000007 ORTHO05D000521 5.4e-07 58.5 76 39.5
Medtr5g027330 Medicago truncatula HOM05D000007 ORTHO05D000521 7.0e-07 58.2 74 44.6
TPR.G13023 Trifolium pratense HOM05D000007 ORTHO05D000521 7.0e-07 58.2 74 41.9
Haze_03323 Corylus avellana HOM05D000007 ORTHO05D000521 9.2e-07 57.8 73 39.7
TPR.G13135 Trifolium pratense HOM05D000007 ORTHO05D000521 1.2e-06 57.4 74 40.5
Medtr7g117100 Medicago truncatula HOM05D000007 ORTHO05D000521 2.0e-06 56.6 72 41.7
Medtr5g007940 Medicago truncatula HOM05D000007 ORTHO05D000521 2.7e-06 56.2 72 41.7
Medtr5g021860 Medicago truncatula HOM05D000007 ORTHO05D000521 2.7e-06 56.2 72 41.7
Medtr5g021880 Medicago truncatula HOM05D000007 ORTHO05D000521 2.7e-06 56.2 72 41.7
Ciclev10011634m.g Citrus clementina HOM05D000007 ORTHO05D000521 3.5e-06 55.8 34 61.8
Medtr4g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 3.5e-06 55.8 72 40.3
Psat0s3499g0120 Pisum sativum HOM05D000007 ORTHO05D000521 3.5e-06 55.8 58 43.1
TPR.G18184 Trifolium pratense HOM05D000007 ORTHO05D000521 3.5e-06 55.8 74 43.2
TPR.G14415 Trifolium pratense HOM05D000007 ORTHO05D000521 4.5e-06 55.5 92 33.7
TPR.G18192 Trifolium pratense HOM05D000007 ORTHO05D000521 4.5e-06 55.5 73 37.0


User provided reference genes

Program Settings