Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 3.3e-81 305.1 162 100.0
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.7e-51 205.7 151 78.1
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 3.8e-45 185.3 105 97.1
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 3.8e-45 185.3 105 97.1
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 1.1e-44 183.7 105 96.2
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.6e-43 179.9 108 91.7
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.7e-43 179.1 105 93.3
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 2.7e-43 179.1 105 93.3
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 7.9e-43 177.6 125 76.8
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 7.9e-43 177.6 105 92.4
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.8e-42 176.4 105 92.4
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 2.3e-42 176.0 117 82.9
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 5.1e-42 174.9 105 90.5
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 6.7e-42 174.5 105 90.5
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 6.7e-42 174.5 105 90.5
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 6.7e-42 174.5 105 90.5
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 6.7e-42 174.5 105 89.5
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 6.7e-42 174.5 112 85.7
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.1e-41 173.7 105 90.5
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.5e-41 173.3 105 89.5
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 1.5e-41 173.3 105 88.6
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 1.5e-41 173.3 105 88.6
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 2.5e-41 172.6 105 88.6
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 2.5e-41 172.6 105 88.6
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 3.3e-41 172.2 105 88.6
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 3.3e-41 172.2 104 88.5
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 3.3e-41 172.2 105 86.7
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 3.3e-41 172.2 104 89.4
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 4.3e-41 171.8 105 87.6
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 4.3e-41 171.8 105 89.5
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 5.7e-41 171.4 105 88.6
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 5.7e-41 171.4 105 87.6
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 7.4e-41 171.0 105 88.6
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 7.4e-41 171.0 105 85.7
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 7.4e-41 171.0 105 88.6
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 7.4e-41 171.0 105 88.6
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 9.7e-41 170.6 105 86.7
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 9.7e-41 170.6 105 86.7
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 9.7e-41 170.6 105 86.7
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 1.3e-40 170.2 105 86.7
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.3e-40 170.2 104 87.5
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 1.3e-40 170.2 104 88.5
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 1.3e-40 170.2 105 86.7
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.7e-40 169.9 105 87.6
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.7e-40 169.9 105 87.6
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 1.7e-40 169.9 105 86.7
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.7e-40 169.9 107 84.1
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 2.8e-40 169.1 105 85.7
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 2.8e-40 169.1 105 86.7
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 2.8e-40 169.1 105 87.6
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 3.7e-40 168.7 105 86.7
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 3.7e-40 168.7 105 88.6
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 4.8e-40 168.3 106 84.9
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 4.8e-40 168.3 105 86.7
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 4.8e-40 168.3 116 79.3
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 4.8e-40 168.3 105 86.7
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 6.3e-40 167.9 105 85.7
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 6.3e-40 167.9 105 86.7
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 8.2e-40 167.5 105 86.7
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 8.2e-40 167.5 105 86.7
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 1.1e-39 167.2 145 68.3
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.1e-39 167.2 105 86.7
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.1e-39 167.2 105 86.7
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.1e-39 167.2 105 86.7
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.4e-39 166.8 105 85.7
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 1.8e-39 166.4 105 84.8
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 1.8e-39 166.4 105 86.7
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 1.8e-39 166.4 105 86.7
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 3.1e-39 165.6 111 82.9
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 3.1e-39 165.6 111 82.9
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 3.1e-39 165.6 105 87.6
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 6.9e-39 164.5 106 86.8
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 6.9e-39 164.5 105 84.8
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.5e-38 163.3 105 85.7
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 2.0e-38 162.9 118 79.7
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.5e-38 161.8 105 84.8
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 7.7e-38 161.0 111 80.2
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 7.7e-38 161.0 111 80.2
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 7.7e-38 161.0 111 80.2
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 7.7e-38 161.0 104 83.7
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 1.3e-37 160.2 103 82.5
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 2.2e-37 159.5 113 78.8
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 2.9e-37 159.1 111 79.3
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 2.9e-37 159.1 111 79.3
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 2.9e-37 159.1 103 81.6
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 3.8e-37 158.7 105 78.1
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 6.5e-37 157.9 111 82.0
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 7.2e-36 154.5 126 71.4
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 2.7e-35 152.5 105 78.1
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 1.4e-34 150.2 99 77.8
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 1.4e-34 150.2 91 86.8
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 3.0e-34 149.1 115 77.4
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 3.0e-34 149.1 126 67.5
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 3.0e-34 149.1 126 66.7
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 3.0e-34 149.1 87 89.7
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 5.1e-34 148.3 85 89.4
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 5.1e-34 148.3 87 88.5
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 6.7e-34 147.9 84 90.5
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 8.8e-34 147.5 87 89.7
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 1.1e-33 147.1 87 88.5
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 2.0e-33 146.4 88 90.9
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 5.7e-33 144.8 87 88.5
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 5.7e-33 144.8 89 85.4
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 6.3e-32 141.4 85 88.2
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 1.1e-31 140.6 87 83.9
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 1.4e-31 140.2 87 88.5
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.4e-31 139.4 96 81.2
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.6e-30 136.7 103 69.9
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.0e-30 136.3 96 79.2
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 4.5e-30 135.2 105 66.7
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 4.5e-30 135.2 93 78.5
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 7.7e-30 134.4 102 65.7
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 1.0e-29 134.0 86 81.4
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 1.3e-29 133.7 93 77.4
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 2.9e-29 132.5 93 79.6
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 3.2e-28 129.0 85 83.5
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 4.2e-28 128.6 99 71.7
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-27 127.1 95 77.9
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 4.7e-27 125.2 138 55.8
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 4.7e-27 125.2 85 74.1
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 8.0e-27 124.4 93 76.3
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.5e-25 120.2 66 92.4
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.5e-25 120.2 66 92.4
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 3.3e-25 119.0 83 75.9
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 7.5e-25 117.9 66 89.4
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 9.7e-25 117.5 66 90.9
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 9.7e-25 117.5 66 90.9
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 9.7e-25 117.5 66 89.4
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 1.7e-24 116.7 65 92.3
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 2.2e-24 116.3 66 89.4
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 2.8e-24 115.9 66 87.9
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 4.8e-24 115.2 66 86.4
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 4.1e-23 112.1 69 85.5
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 7.0e-23 111.3 66 86.4
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 2.7e-22 109.4 69 79.7
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 5.9e-22 108.2 66 83.3
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 7.7e-22 107.8 61 93.4
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 3.8e-21 105.5 80 75.0
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 5.0e-21 105.1 105 63.8
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 5.5e-20 101.7 63 84.1
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 4.7e-19 98.6 67 74.6
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 1.4e-18 97.1 99 51.5
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 2.3e-18 96.3 64 76.6
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 6.8e-18 94.7 66 74.2
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 6.8e-18 94.7 64 75.0
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 8.8e-18 94.4 78 64.1
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 3.4e-17 92.4 65 73.8
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 2.8e-16 89.4 68 67.6
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 7.7e-14 81.3 97 43.3
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 7.7e-14 81.3 115 40.0
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 1.3e-13 80.5 51 84.3
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 1.7e-13 80.1 62 72.6
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 1.2e-06 57.4 51 64.7
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 1.6e-06 57.0 116 31.9


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