Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G103400 Prunus persica HOM05D000003 ORTHO05D009449 2.0e-73 278.9 130 100.0
COL.COLO4_37225 Corchorus olitorius HOM05D000003 ORTHO05D000126 2.4e-13 79.3 130 35.4
COL.COLO4_13287 Corchorus olitorius HOM05D000003 ORTHO05D000126 5.3e-13 78.2 132 33.3
COL.COLO4_29577 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.3e-13 78.2 132 33.3
FvH4_3g32111 Fragaria vesca HOM05D000003 ORTHO05D000004 6.9e-13 77.8 128 32.8
Lj1g0000509 Lotus japonicus HOM05D000003 ORTHO05D000004 1.2e-12 77.0 129 32.6
COL.COLO4_35856 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.9e-11 71.6 129 31.0
Prupe.5G070700 Prunus persica HOM05D000003 ORTHO05D000004 1.1e-10 70.5 84 39.3
FvH4_4g05481 Fragaria vesca HOM05D008133 ORTHO05D009449 3.2e-10 68.9 76 39.5
RcHm_v2.0_Chr4g0398081 Rosa chinensis HOM05D008133 ORTHO05D009449 3.2e-10 68.9 135 27.4
COL.COLO4_18924 Corchorus olitorius HOM05D000003 ORTHO05D009449 5.4e-10 68.2 128 27.3
COL.COLO4_22747 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.4e-10 68.2 98 34.7
COL.COLO4_38392 Corchorus olitorius HOM05D000003 ORTHO05D000004 5.4e-10 68.2 99 33.3
Prupe.1G283700 Prunus persica HOM05D008133 ORTHO05D009449 9.3e-10 67.4 134 29.9
FvH4_2g05763 Fragaria vesca HOM05D000003 ORTHO05D000004 2.1e-09 66.2 130 29.2
COL.COLO4_32288 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.5e-09 65.5 130 33.8
Prupe.2G092000 Prunus persica HOM05D000003 ORTHO05D000004 2.3e-08 62.8 127 33.9
LjContig00408g0023232 Lotus japonicus HOM05D000003 ORTHO05D000004 3.0e-08 62.4 139 27.3
FvH4_5g08844 Fragaria vesca HOM05D000003 ORTHO05D000004 6.6e-08 61.2 128 26.6
FvH4_6g16031 Fragaria vesca HOM05D000003 ORTHO05D009449 6.6e-08 61.2 129 28.7
RcHm_v2.0_Chr1g0334101 Rosa chinensis HOM05D000005 ORTHO05D000012 6.6e-08 61.2 65 44.6
RcHm_v2.0_Chr7g0210911 Rosa chinensis HOM05D000003 ORTHO05D000004 6.6e-08 61.2 67 43.3
PSO425G0063 Papaver somniferum HOM05D000003 ORTHO05D001026 3.3e-07 58.9 129 27.1
COL.COLO4_07290 Corchorus olitorius HOM05D000003 ORTHO05D000004 7.3e-07 57.8 90 32.2
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.1e-06 56.2 126 27.0
FvH4_2g11841 Fragaria vesca HOM05D000003 ORTHO05D000004 2.1e-06 56.2 120 30.8
COL.COLO4_27235 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.8e-06 55.1 79 38.0
vmacro11570 Vaccinium macrocarpon HOM05D004336 ORTHO05D005367 4.8e-06 55.1 118 29.7
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 8.1e-06 54.3 84 34.5
PSO017G3959 Papaver somniferum HOM05D000003 ORTHO05D000004 8.1e-06 54.3 128 25.8


User provided reference genes

Program Settings