Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G099100 Prunus persica HOM05D000345 ORTHO05D000215 9.9e-64 246.5 116 100.0
Prupe.4G083500 Prunus persica HOM05D000345 ORTHO05D000215 9.4e-30 133.7 85 80.0
MD05G1281100 Malus domestica HOM05D000345 ORTHO05D000215 5.2e-20 101.3 90 63.3
RcHm_v2.0_Chr5g0014491 Rosa chinensis HOM05D000345 ORTHO05D000215 2.9e-15 85.5 87 58.6
FAN16G2080 Fragaria x ananassa HOM05D000345 ORTHO05D000215 5.0e-15 84.7 85 56.5
Atru.chr10.1165 Acer truncatum HOM05D000345 ORTHO05D000215 8.5e-15 84.0 102 51.0
Cpa.g.sc17.1 Carica papaya HOM05D000345 ORTHO05D000215 7.2e-14 80.9 90 51.1
Potri.004G065800 Populus trichocarpa HOM05D000345 ORTHO05D000215 1.6e-13 79.7 100 48.0
FAN11G2780 Fragaria x ananassa HOM05D000345 ORTHO05D000215 2.1e-13 79.3 83 51.8
CiPaw.09G121500 Carya illinoinensis HOM05D000345 ORTHO05D000215 4.7e-13 78.2 96 49.0
DCAR_007880 Daucus carota HOM05D000345 ORTHO05D000215 4.7e-13 78.2 80 50.0
Sabra04G0043900 Salix brachista HOM05D000345 ORTHO05D000215 4.7e-13 78.2 97 52.6
FvH4_3g05220 Fragaria vesca HOM05D000345 ORTHO05D000215 8.0e-13 77.4 88 54.5
Thecc.06G147300 Theobroma cacao HOM05D000345 ORTHO05D000215 1.0e-12 77.0 103 46.6
Dinv32229 Davidia involucrata HOM05D000345 ORTHO05D000215 1.4e-12 76.6 92 48.9
QL05p055765 Quercus lobata HOM05D000345 ORTHO05D000215 1.4e-12 76.6 95 50.5
TWI73G0085 Tripterygium wilfordii HOM05D000345 ORTHO05D000215 1.4e-12 76.6 100 48.0
Lalb_Chr07g0187601 Lupinus albus HOM05D000345 ORTHO05D000215 3.0e-12 75.5 89 50.6
MD10G1259500 Malus domestica HOM05D000345 ORTHO05D000215 3.0e-12 75.5 90 52.2
ClCG01G024760 Citrullus lanatus HOM05D000345 ORTHO05D000215 5.2e-12 74.7 100 45.0
TWI09G1307 Tripterygium wilfordii HOM05D000345 ORTHO05D000215 5.2e-12 74.7 99 48.5
CANSAT35G0369 Cannabis sativa HOM05D000345 ORTHO05D000215 6.8e-12 74.3 104 48.1
Manes.17G072800 Manihot esculenta HOM05D000345 ORTHO05D000215 6.8e-12 74.3 102 47.1
Ca_00532_v3 Cicer arietinum L. HOM05D000345 ORTHO05D000215 8.8e-12 73.9 93 50.5
COL.COLO4_31036 Corchorus olitorius HOM05D000345 ORTHO05D000215 8.8e-12 73.9 108 43.5
CiPaw.10G089900 Carya illinoinensis HOM05D000345 ORTHO05D000215 1.5e-11 73.2 95 49.5
Haze_05631 Corylus avellana HOM05D000345 ORTHO05D000215 2.0e-11 72.8 100 46.0
Duzib192G0370 Durio zibethinus HOM05D000345 ORTHO05D000215 2.0e-11 72.8 104 47.1
Ciclev10014986m.g Citrus clementina HOM05D000345 ORTHO05D000215 2.6e-11 72.4 112 46.4
Ca_18167_v3 Cicer arietinum L. HOM05D000345 ORTHO05D000215 4.4e-11 71.6 91 47.3
CsaV3_6G051860 Cucumis sativus L. HOM05D000345 ORTHO05D000215 4.4e-11 71.6 100 48.0
Manes.15G123800 Manihot esculenta HOM05D000345 ORTHO05D000215 4.4e-11 71.6 105 45.7
Potri.011G083100 Populus trichocarpa HOM05D000345 ORTHO05D000215 7.5e-11 70.9 110 43.6
ClCG03G006640 Citrullus lanatus HOM05D000345 ORTHO05D000215 9.8e-11 70.5 111 41.4
Lalb_Chr20g0117851 Lupinus albus HOM05D000345 ORTHO05D000215 9.8e-11 70.5 81 49.4
MELO3C007121.2 Cucumis melo HOM05D000345 ORTHO05D000215 1.3e-10 70.1 99 43.4
Dinv21554 Davidia involucrata HOM05D000345 ORTHO05D000215 1.3e-10 70.1 94 47.9
Gohir.A05G147300 Gossypium hirsutum HOM05D000345 ORTHO05D000215 1.3e-10 70.1 102 47.1
arahy.Tifrunner.gnm1.ann1.UL2QPJ Arachis hypogaea HOM05D000345 ORTHO05D000215 1.7e-10 69.7 80 51.2
Gohir.D05G149800 Gossypium hirsutum HOM05D000345 ORTHO05D000215 1.7e-10 69.7 102 47.1
Gorai.009G153900 Gossypium raimondii HOM05D000345 ORTHO05D000215 1.7e-10 69.7 102 47.1
arahy.Tifrunner.gnm1.ann1.JF9204 Arachis hypogaea HOM05D000345 ORTHO05D000215 2.2e-10 69.3 80 51.2
Gohir.A10G042460 Gossypium hirsutum HOM05D000345 ORTHO05D000215 2.2e-10 69.3 105 44.8
Gohir.D10G043432 Gossypium hirsutum HOM05D000345 ORTHO05D000215 2.2e-10 69.3 105 44.8
Gorai.011G046000 Gossypium raimondii HOM05D000345 ORTHO05D000215 2.2e-10 69.3 105 44.8
Hma1.2p1_0020F.1_g014230 Hydrangea macrophylla HOM05D000345 ORTHO05D000215 2.2e-10 69.3 94 47.9
Psat0s1198g0040 Pisum sativum HOM05D000345 ORTHO05D000215 2.2e-10 69.3 82 52.4
TPR.G9562 Trifolium pratense HOM05D000345 ORTHO05D000215 2.8e-10 68.9 82 54.9
CSS0010058 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 8.3e-10 67.4 98 43.9
Glyma.15G092500 Glycine max HOM05D000345 ORTHO05D000215 8.3e-10 67.4 88 50.0
Sed0011137 Sechium edule HOM05D000345 ORTHO05D000215 8.3e-10 67.4 97 43.3
TAR627G0300 Trochodendron aralioides HOM05D000345 ORTHO05D000215 8.3e-10 67.4 85 47.1
Actinidia32342 Actinidia chinensis HOM05D000345 ORTHO05D000215 1.1e-09 67.0 98 45.9
Nitab4.5_0000206g0010 Nicotiana tabacum HOM05D000345 ORTHO05D000215 1.1e-09 67.0 81 46.9
Nitab4.5_0001594g0010 Nicotiana tabacum HOM05D000345 ORTHO05D000215 1.1e-09 67.0 80 50.0
MELO3C002754.2 Cucumis melo HOM05D000345 ORTHO05D000215 1.4e-09 66.6 113 40.7
CsaV3_1G004660 Cucumis sativus L. HOM05D000345 ORTHO05D000215 1.8e-09 66.2 113 40.7
Duzib160G0160 Durio zibethinus HOM05D000345 ORTHO05D000215 1.8e-09 66.2 101 42.6
Lj4g0008386 Lotus japonicus HOM05D000345 ORTHO05D000215 1.8e-09 66.2 86 46.5
Sed0008936 Sechium edule HOM05D000345 ORTHO05D000215 1.8e-09 66.2 105 41.9
Nitab4.5_0004548g0010 Nicotiana tabacum HOM05D000345 ORTHO05D000215 2.4e-09 65.9 80 46.2
Nitab4.5_0006712g0010 Nicotiana tabacum HOM05D000345 ORTHO05D000215 2.4e-09 65.9 81 49.4
VMungo0540G1036 Vigna mungo HOM05D000345 ORTHO05D000215 2.4e-09 65.9 93 47.3
Phvul.006G166600 Phaseolus vulgaris HOM05D000345 ORTHO05D000215 3.1e-09 65.5 94 46.8
Actinidia01566 Actinidia chinensis HOM05D000345 ORTHO05D000215 5.4e-09 64.7 97 43.3
CSS0017338 Camellia sinensis var. sinensis HOM05D000345 ORTHO05D000215 7.0e-09 64.3 89 44.9
TWI53G0868 Tripterygium wilfordii HOM05D000345 ORTHO05D000215 7.0e-09 64.3 96 41.7
CDE12G0539 Ceratophyllum demersum HOM05D000345 ORTHO05D000215 9.1e-09 63.9 80 46.2
PGR083G2558 Punica granatum HOM05D000345 ORTHO05D000215 9.1e-09 63.9 90 50.0
TAR626G0258 Trochodendron aralioides HOM05D000345 ORTHO05D000215 9.1e-09 63.9 82 43.9
Duzib235G0571 Durio zibethinus HOM05D000345 ORTHO05D000215 1.2e-08 63.5 108 40.7
Lalb_Chr15g0086761 Lupinus albus HOM05D000345 ORTHO05D000215 1.2e-08 63.5 82 46.3
CAN.G103.7 Capsicum annuum HOM05D000345 ORTHO05D000215 1.6e-08 63.2 77 48.1
Glyma.13G219900 Glycine max HOM05D000345 ORTHO05D000215 2.0e-08 62.8 95 45.3
Oeu034129.1 Olea europaea HOM05D000345 ORTHO05D000215 2.0e-08 62.8 98 41.8
Oeu042464.1 Olea europaea HOM05D000345 ORTHO05D000215 2.7e-08 62.4 90 44.4
Rhsim13G0115800 Rhododendron simsii HOM05D000345 ORTHO05D000215 3.5e-08 62.0 98 39.8
CAN.G103.8 Capsicum annuum HOM05D000345 ORTHO05D000215 1.0e-07 60.5 83 48.2
Peaxi162Scf00317g00020 Petunia axillaris HOM05D000345 ORTHO05D000215 1.0e-07 60.5 79 46.8
HanXRQChr16g0525741 Helianthus annuus HOM05D000345 ORTHO05D000215 1.3e-07 60.1 89 46.1
SGA_v2.0_scaffold223G42817 Striga asiatica HOM05D000345 ORTHO05D000215 1.3e-07 60.1 92 43.5
Lj6g0018628 Lotus japonicus HOM05D000345 ORTHO05D000215 1.7e-07 59.7 82 45.1
CDE01G0667 Ceratophyllum demersum HOM05D000345 ORTHO05D000215 2.9e-07 58.9 80 43.8
Lsat_1_v5_gn_7_27781 Lactuca sativa HOM05D000345 ORTHO05D000215 2.9e-07 58.9 91 41.8
Sabra11G0066200 Salix brachista HOM05D000345 ORTHO05D000215 2.9e-07 58.9 110 40.0
Sed0012498 Sechium edule HOM05D000345 ORTHO05D000215 5.0e-07 58.2 80 45.0
TAR624G0044 Trochodendron aralioides HOM05D000345 ORTHO05D000215 5.0e-07 58.2 71 49.3
Glyma.08G097900 Glycine max HOM05D000345 ORTHO05D000215 1.1e-06 57.0 84 44.0
HanXRQChr15g0482041 Helianthus annuus HOM05D000345 ORTHO05D000215 1.5e-06 56.6 90 42.2
Lsat_1_v5_gn_4_29640 Lactuca sativa HOM05D000345 ORTHO05D000215 1.5e-06 56.6 94 41.5
Oeu040096.1 Olea europaea HOM05D000345 ORTHO05D000215 1.5e-06 56.6 89 43.8
Nn4g26607 Nelumbo nucifera HOM05D000345 ORTHO05D000215 3.3e-06 55.5 86 41.9
BcaNung02701 Brassica carinata HOM05D000345 ORTHO05D000215 4.2e-06 55.1 40 67.5
C07p49670 Brassica napus HOM05D000345 ORTHO05D000215 4.2e-06 55.1 40 67.5
BolC7t45468H Brassica oleracea HOM05D000345 ORTHO05D000215 4.2e-06 55.1 40 67.5
Oeu031183.1 Olea europaea HOM05D000345 ORTHO05D000215 4.2e-06 55.1 95 40.0
unitig_37.g12091 Utricularia gibba HOM05D000345 ORTHO05D000215 4.2e-06 55.1 99 41.4
GSVIVG01021528001 Vitis vinifera HOM05D000345 ORTHO05D000215 4.2e-06 55.1 35 74.3
Aqoxy4G00065 Aquilegia oxysepala HOM05D000345 ORTHO05D000215 5.5e-06 54.7 36 72.2
A03p51240 Brassica napus HOM05D000345 ORTHO05D000215 5.5e-06 54.7 39 69.2
BraA03t14207Z Brassica rapa HOM05D000345 ORTHO05D000215 5.5e-06 54.7 39 69.2
CARHR225190 Cardamine hirsuta HOM05D000345 ORTHO05D000215 5.5e-06 54.7 39 69.2
Sp7g15650 Schrenkiella parvula HOM05D000345 ORTHO05D000215 5.5e-06 54.7 39 69.2
Aa31LG6G1100 Aethionema arabicum HOM05D000345 ORTHO05D000215 7.2e-06 54.3 38 71.1
BcaC09g51521 Brassica carinata HOM05D000345 ORTHO05D000215 7.2e-06 54.3 38 71.1
BcaNung00006 Brassica carinata HOM05D000345 ORTHO05D000215 7.2e-06 54.3 38 71.1
A01p10320 Brassica napus HOM05D000345 ORTHO05D000215 7.2e-06 54.3 74 47.3
C01p12270 Brassica napus HOM05D000345 ORTHO05D000215 7.2e-06 54.3 38 71.1
BolC1t01203H Brassica oleracea HOM05D000345 ORTHO05D000215 7.2e-06 54.3 38 71.1
BraA01t00979Z Brassica rapa HOM05D000345 ORTHO05D000215 7.2e-06 54.3 74 47.3
Nitab4.5_0001721g0060 Nicotiana tabacum HOM05D000345 ORTHO05D000215 7.2e-06 54.3 34 73.5
SalBow8G5017 Salvia bowleyana HOM05D000345 ORTHO05D000215 9.5e-06 53.9 102 39.2
Hund21538 Selenicereus undatus HOM05D000345 ORTHO05D000215 9.5e-06 53.9 37 70.3
Sc05g0006050 Simmondsia chinensis HOM05D000345 ORTHO05D000215 9.5e-06 53.9 113 38.1
Sopen08g010620 Solanum pennellii HOM05D000345 ORTHO05D000215 9.5e-06 53.9 80 42.5


User provided reference genes

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