Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G095500 Prunus persica HOM05D010060 ORTHO05D010672 2.9e-77 293.1 358 100.0
FAN19G1720 Fragaria x ananassa HOM05D036469 ORTHO05D010672 5.1e-18 96.3 112 64.3
FvH4_1g03660 Fragaria vesca HOM05D036469 ORTHO05D010672 3.3e-17 93.6 109 65.1
FAN05G1812 Fragaria x ananassa HOM05D036469 ORTHO05D010672 4.8e-16 89.7 115 67.0
Thecc.06G037600 Theobroma cacao HOM05D010060 ORTHO05D010672 4.1e-15 86.7 121 45.5
Potri.003G179301 Populus trichocarpa HOM05D010060 ORTHO05D010672 2.6e-14 84.0 116 50.9
CiPaw.02G160700 Carya illinoinensis HOM05D010060 ORTHO05D010672 5.0e-13 79.7 114 61.4
Sabra03G0131400 Salix brachista HOM05D010060 ORTHO05D010672 6.5e-13 79.3 97 51.5
Nn8g39734 Nelumbo nucifera HOM05D010060 ORTHO05D010672 1.6e-11 74.7 44 75.0
Aa31LG7G430 Aethionema arabicum HOM05D012449 ORTHO05D010672 2.7e-11 73.9 51 68.6
Gorai.009G125500 Gossypium raimondii HOM05D010060 ORTHO05D010672 6.1e-11 72.8 111 51.4
Gohir.A05G121000 Gossypium hirsutum HOM05D010060 ORTHO05D010672 1.8e-10 71.2 111 55.0
Gohir.D05G122000 Gossypium hirsutum HOM05D010060 ORTHO05D010672 2.3e-10 70.9 111 49.5
MELO3C017856.2 Cucumis melo HOM05D010060 ORTHO05D010672 6.7e-10 69.3 101 45.5
CANSAT56G0640 Cannabis sativa HOM05D010060 ORTHO05D010672 2.0e-09 67.8 111 53.2
COL.COLO4_26651 Corchorus olitorius HOM05D010060 ORTHO05D010672 2.0e-09 67.8 114 59.6
VMungo0331G1910 Vigna mungo HOM05D012449 ORTHO05D010672 2.0e-09 67.8 43 67.4
arahy.Tifrunner.gnm1.ann1.14Y83U Arachis hypogaea HOM05D010060 ORTHO05D010672 2.6e-09 67.4 40 70.0
ClCG07G012370 Citrullus lanatus HOM05D010060 ORTHO05D010672 7.4e-09 65.9 107 41.1
BolC8t52019H Brassica oleracea HOM05D012449 ORTHO05D010672 2.2e-08 64.3 47 61.7
EL10Ac8g19448 Beta vulgaris HOM05D010060 ORTHO05D010672 3.7e-08 63.5 102 61.8
BcaB03g14516 Brassica carinata HOM05D012449 ORTHO05D010672 3.7e-08 63.5 50 60.0
BcaC07g41475 Brassica carinata HOM05D012449 ORTHO05D010672 6.3e-08 62.8 45 62.2
C08p44730 Brassica napus HOM05D012449 ORTHO05D010672 6.3e-08 62.8 40 67.5
PSO832G3355 Papaver somniferum HOM05D010060 ORTHO05D010672 8.2e-08 62.4 54 57.4
Medtr2g104780 Medicago truncatula HOM05D012449 ORTHO05D010672 1.1e-07 62.0 56 57.1
A09p61130 Brassica napus HOM05D012449 ORTHO05D010672 1.4e-07 61.6 71 49.3
BraA09t41487Z Brassica rapa HOM05D012449 ORTHO05D010672 1.4e-07 61.6 71 49.3
Phvul.010G159300 Phaseolus vulgaris HOM05D012449 ORTHO05D010672 1.4e-07 61.6 90 45.6
AL1G27990 Arabidopsis lyrata HOM05D012449 ORTHO05D010672 3.1e-07 60.5 40 65.0
Oeu010090.1 Olea europaea HOM05D013655 ORTHO05D010672 3.1e-07 60.5 125 42.4
Manes.04G105502 Manihot esculenta HOM05D010060 ORTHO05D010672 5.3e-07 59.7 117 43.6
DCAR_025534 Daucus carota HOM05D010060 ORTHO05D010672 9.1e-07 58.9 48 56.2
ECA232G3742 Erigeron canadensis HOM05D013655 ORTHO05D010672 9.1e-07 58.9 113 38.9
THA.LOC104813310 Tarenaya hassleriana HOM05D010060 ORTHO05D010672 1.5e-06 58.2 104 39.4
Carub.0001s1564 Capsella rubella HOM05D012449 ORTHO05D010672 2.6e-06 57.4 157 36.9
Glyma.07G026000 Glycine max HOM05D012449 ORTHO05D010672 5.9e-06 56.2 101 41.6
PGSC0003DMG400014129 Solanum tuberosum HOM05D013655 ORTHO05D010672 5.9e-06 56.2 107 48.6
SGA_v2.0_scaffold37G14732 Striga asiatica HOM05D010060 ORTHO05D010672 5.9e-06 56.2 59 52.5


User provided reference genes

Program Settings