Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G093700 Prunus persica HOM05D001268 ORTHO05D009892 2.2e-52 208.8 109 100.0
RcHm_v2.0_Chr2g0134261 Rosa chinensis HOM05D001268 ORTHO05D009892 3.5e-10 68.6 105 46.7
COL.COLO4_11838 Corchorus olitorius HOM05D001268 ORTHO05D009892 6.0e-10 67.8 102 46.1
Ciclev10027369m.g Citrus clementina HOM05D001268 ORTHO05D009892 3.9e-09 65.1 99 43.4
ClCG06G011910 Citrullus lanatus HOM05D001268 ORTHO05D009892 6.6e-09 64.3 107 41.1
Dinv23322 Davidia involucrata HOM05D001268 ORTHO05D009892 8.6e-09 63.9 111 41.4
Manes.14G120800 Manihot esculenta HOM05D001268 ORTHO05D009892 1.5e-08 63.2 84 48.8
Thecc.06G034700 Theobroma cacao HOM05D001268 ORTHO05D009892 2.5e-08 62.4 81 48.1
Manes.04G107300 Manihot esculenta HOM05D001268 ORTHO05D009892 4.3e-08 61.6 92 45.7
Nn2g12214 Nelumbo nucifera HOM05D001268 ORTHO05D009892 5.6e-08 61.2 83 45.8
Nitab4.5_0002322g0130 Nicotiana tabacum HOM05D001268 ORTHO05D001577 7.3e-08 60.8 90 40.0
QL05p033188 Quercus lobata HOM05D001268 ORTHO05D009892 1.2e-07 60.1 103 43.7
Rhsim01G0050900 Rhododendron simsii HOM05D001268 ORTHO05D009892 1.6e-07 59.7 92 43.5
Manes.06G043000 Manihot esculenta HOM05D001268 ORTHO05D009892 3.6e-07 58.5 101 43.6
Nitab4.5_0006648g0020 Nicotiana tabacum HOM05D001268 ORTHO05D001577 3.6e-07 58.5 90 38.9
Sed0025373 Sechium edule HOM05D001268 ORTHO05D009892 3.6e-07 58.5 83 39.8
Haze_16621 Corylus avellana HOM05D001268 ORTHO05D009892 4.7e-07 58.2 83 49.4
Lsat_1_v5_gn_5_92321 Lactuca sativa HOM05D001268 ORTHO05D009892 6.2e-07 57.8 83 43.4
Nn8g39673 Nelumbo nucifera HOM05D001268 ORTHO05D009892 6.2e-07 57.8 83 42.2
Cfa020909 Carpinus fangiana HOM05D001268 ORTHO05D009892 8.0e-07 57.4 83 43.4
Haze_19340 Corylus avellana HOM05D001268 ORTHO05D009892 1.1e-06 57.0 83 41.0
MELO3C010274.2 Cucumis melo HOM05D001268 ORTHO05D009892 1.1e-06 57.0 83 44.6
Atru.chr7.288 Acer truncatum HOM05D001268 ORTHO05D009892 1.8e-06 56.2 103 38.8
COL.COLO4_11841 Corchorus olitorius HOM05D001268 ORTHO05D009892 1.8e-06 56.2 44 61.4
Duzib235G1415 Durio zibethinus HOM05D001268 ORTHO05D009892 1.8e-06 56.2 109 40.4
Hma1.2p1_1388F.1_g279920 Hydrangea macrophylla HOM05D001268 ORTHO05D009892 2.3e-06 55.8 84 42.9
Oeu027835.1 Olea europaea HOM05D001268 ORTHO05D001577 2.3e-06 55.8 92 39.1
Glyma.09G092400 Glycine max HOM05D001268 ORTHO05D009892 4.0e-06 55.1 111 36.0
Oeu060122.1 Olea europaea HOM05D001268 ORTHO05D001577 4.0e-06 55.1 92 39.1
TAR626G1674 Trochodendron aralioides HOM05D001268 ORTHO05D009892 4.0e-06 55.1 96 38.5
Psat0s1919g0040 Pisum sativum HOM05D001268 ORTHO05D009892 5.2e-06 54.7 101 40.6


User provided reference genes

Program Settings