Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G090200 Prunus persica HOM05D006506 ORTHO05D007809 6.1e-180 634.0 320 100.0
MD17G1214300 Malus domestica HOM05D006506 ORTHO05D007809 1.9e-173 612.5 320 95.0
Cfa001948 Carpinus fangiana HOM05D006506 ORTHO05D007809 5.0e-166 587.8 320 91.2
Haze_13452 Corylus avellana HOM05D006506 ORTHO05D007809 2.8e-164 582.0 320 90.3
FAN14G4998 Fragaria x ananassa HOM05D000001 ORTHO05D007809 6.8e-163 577.4 320 89.4
COL.COLO4_11906 Corchorus olitorius HOM05D006506 ORTHO05D007809 8.9e-163 577.0 320 89.4
Thecc.06G030600 Theobroma cacao HOM05D006506 ORTHO05D007809 1.5e-162 576.2 317 89.6
FvH4_6g29440 Fragaria vesca HOM05D006506 ORTHO05D007809 2.6e-162 575.5 320 89.1
FAN05G2665 Fragaria x ananassa HOM05D000001 ORTHO05D007809 9.8e-162 573.5 320 89.1
FAN09G0903 Fragaria x ananassa HOM05D006506 ORTHO05D007809 9.8e-162 573.5 320 89.1
CsaV3_7G032300 Cucumis sativus L. HOM05D006506 ORTHO05D007809 1.7e-161 572.8 320 89.4
RcHm_v2.0_Chr2g0134931 Rosa chinensis HOM05D006506 ORTHO05D007809 1.7e-161 572.8 320 89.7
Duzib160G0645 Durio zibethinus HOM05D006506 ORTHO05D007809 3.7e-161 571.6 320 87.5
FAN02G0099 Fragaria x ananassa HOM05D006506 ORTHO05D007809 3.7e-161 571.6 320 88.4
MELO3C023430.2 Cucumis melo HOM05D006506 ORTHO05D007809 1.1e-160 570.1 320 88.8
TWI75G0153 Tripterygium wilfordii HOM05D006506 ORTHO05D007809 1.1e-160 570.1 320 86.9
CiPaw.01G249400 Carya illinoinensis HOM05D006506 ORTHO05D007809 3.2e-160 568.5 320 88.4
Duzib160G0598 Durio zibethinus HOM05D006506 ORTHO05D007809 5.4e-160 567.8 320 86.9
CANSAT56G2592 Cannabis sativa HOM05D006506 ORTHO05D007809 7.0e-160 567.4 318 88.1
Sed0005275 Sechium edule HOM05D006506 ORTHO05D007809 1.6e-159 566.2 320 87.2
Gohir.D06G120300 Gossypium hirsutum HOM05D006506 ORTHO05D007809 3.9e-158 561.6 320 86.6
Gohir.A06G107700 Gossypium hirsutum HOM05D006506 ORTHO05D007809 8.6e-158 560.5 320 86.2
Gorai.010G138400 Gossypium raimondii HOM05D006506 ORTHO05D007809 1.5e-157 559.7 320 86.2
Cpa.g.sc67.28 Carica papaya HOM05D006506 ORTHO05D007809 1.8e-155 552.7 320 85.0
Ciclev10026100m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.8e-154 547.0 319 85.6
Dinv38132 Davidia involucrata HOM05D006506 ORTHO05D007809 6.4e-153 544.3 328 82.6
Duzib235G0689 Durio zibethinus HOM05D006506 ORTHO05D007809 1.4e-152 543.1 322 84.5
DCAR_021353 Daucus carota HOM05D006506 ORTHO05D007809 2.4e-152 542.3 326 83.4
Actinidia15748 Actinidia chinensis HOM05D006506 ORTHO05D007809 1.3e-150 536.6 327 80.4
GSVIVG01017366001 Vitis vinifera HOM05D006506 ORTHO05D007809 8.6e-150 533.9 322 82.0
ECA232G3059 Erigeron canadensis HOM05D006506 ORTHO05D007809 1.2e-148 530.0 321 81.0
CSS0043074 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 2.1e-148 529.3 327 80.1
SHI11239 Sapria himalayana HOM05D006506 ORTHO05D007809 3.6e-148 528.5 322 80.7
Potri.001G201700 Populus trichocarpa HOM05D006506 ORTHO05D007809 4.7e-148 528.1 321 82.9
CSS0005655 Camellia sinensis var. sinensis HOM05D006506 ORTHO05D007809 8.1e-148 527.3 327 79.8
Lj2g0016250 Lotus japonicus HOM05D006506 ORTHO05D007809 1.8e-147 526.2 322 79.2
arahy.Tifrunner.gnm1.ann1.9QS0XN Arachis hypogaea HOM05D006506 ORTHO05D007809 5.2e-147 524.6 320 79.4
Sabra01G0159300 Salix brachista HOM05D006506 ORTHO05D007809 6.8e-147 524.2 322 82.6
TAR371G0436 Trochodendron aralioides HOM05D006506 ORTHO05D007809 1.2e-146 523.5 321 80.7
arahy.Tifrunner.gnm1.ann1.SP1H5F Arachis hypogaea HOM05D006506 ORTHO05D007809 3.4e-146 521.9 320 78.8
CARHR042650 Cardamine hirsuta HOM05D006506 ORTHO05D007809 5.8e-146 521.2 320 80.3
Carub.0001s4149 Capsella rubella HOM05D006506 ORTHO05D007809 7.5e-146 520.8 320 80.6
Peaxi162Scf00553g00510 Petunia axillaris HOM05D006506 ORTHO05D007809 7.5e-146 520.8 328 79.3
AL1G60780 Arabidopsis lyrata HOM05D006506 ORTHO05D007809 9.8e-146 520.4 320 80.3
AT1G52530 Arabidopsis thaliana HOM05D006506 ORTHO05D007809 2.2e-145 519.2 320 79.7
Lsat_1_v5_gn_4_87520 Lactuca sativa HOM05D006506 ORTHO05D007809 2.2e-145 519.2 323 80.2
BcaB02g10986 Brassica carinata HOM05D006506 ORTHO05D007809 8.3e-145 517.3 320 79.4
Sp1g39080 Schrenkiella parvula HOM05D006506 ORTHO05D007809 1.1e-144 516.9 320 79.4
Aa31LG10G2470 Aethionema arabicum HOM05D006506 ORTHO05D007809 1.4e-144 516.5 320 79.4
HanXRQChr16g0500351 Helianthus annuus HOM05D006506 ORTHO05D007809 1.9e-144 516.2 325 79.4
Rhsim08G0211600 Rhododendron simsii HOM05D006506 ORTHO05D007809 1.9e-144 516.2 327 78.3
Thhalv10011665m.g Eutrema salsugineum HOM05D006506 ORTHO05D007809 3.2e-144 515.4 320 78.8
BraA05t20791Z Brassica rapa HOM05D006506 ORTHO05D007809 4.1e-144 515.0 320 79.4
A05p18940 Brassica napus HOM05D006506 ORTHO05D007809 5.4e-144 514.6 320 79.4
Ca_04862_v3 Cicer arietinum L. HOM05D006506 ORTHO05D007809 2.1e-143 512.7 320 77.2
Nitab4.5_0005461g0020 Nicotiana tabacum HOM05D006506 ORTHO05D007809 2.7e-143 512.3 328 77.4
PGSC0003DMG400014148 Solanum tuberosum HOM05D006506 ORTHO05D007809 4.6e-143 511.5 328 75.6
vmacro19011 Vaccinium macrocarpon HOM05D006506 ORTHO05D007809 6.0e-143 511.1 324 78.4
Nitab4.5_0010868g0010 Nicotiana tabacum HOM05D006506 ORTHO05D007809 1.0e-142 510.4 328 77.1
CAN.G407.9 Capsicum annuum HOM05D006506 ORTHO05D007809 1.7e-142 509.6 328 76.2
BcaC08g44001 Brassica carinata HOM05D006506 ORTHO05D007809 6.6e-142 507.7 320 78.8
PGR031G2298 Punica granatum HOM05D006506 ORTHO05D007809 6.6e-142 507.7 323 78.9
C06p14060 Brassica napus HOM05D006506 ORTHO05D007809 1.9e-141 506.1 320 78.4
BolC6t36584H Brassica oleracea HOM05D006506 ORTHO05D007809 1.9e-141 506.1 320 78.4
Lalb_Chr06g0175141 Lupinus albus HOM05D006506 ORTHO05D007809 2.5e-141 505.8 326 77.3
Sopen03g036430 Solanum pennellii HOM05D006506 ORTHO05D007809 2.5e-141 505.8 328 74.7
Ciclev10027407m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.5e-141 503.8 318 80.5
Cc04_g04540 Coffea canephora HOM05D006506 ORTHO05D007809 1.2e-140 503.4 324 76.9
PSO210G7208 Papaver somniferum HOM05D006506 ORTHO05D007809 1.6e-140 503.1 320 77.8
MBI06_g17213_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 4.7e-140 501.5 317 77.6
Phvul.004G032600 Phaseolus vulgaris HOM05D006506 ORTHO05D007809 6.2e-140 501.1 320 76.9
TPR.G16552 Trifolium pratense HOM05D006506 ORTHO05D007809 8.1e-140 500.7 320 75.6
Psat1g070040 Pisum sativum HOM05D006506 ORTHO05D007809 1.1e-139 500.4 320 75.9
Medtr1g082730 Medicago truncatula HOM05D006506 ORTHO05D007809 1.4e-139 500.0 320 75.3
VMungo0464G1487 Vigna mungo HOM05D006506 ORTHO05D007809 1.5e-138 496.5 321 76.3
Glyma.13G059800 Glycine max HOM05D006506 ORTHO05D007809 3.8e-137 491.9 320 75.0
Oeu027841.1 Olea europaea HOM05D006506 ORTHO05D007809 8.4e-137 490.7 325 75.7
Ciclev10026188m.g Citrus clementina HOM05D006506 ORTHO05D007809 2.1e-135 486.1 318 78.6
Ciclev10027493m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.0e-135 484.6 299 82.9
Ciclev10027064m.g Citrus clementina HOM05D006506 ORTHO05D007809 6.6e-134 481.1 299 81.9
MSTRG.11150 Avicennia marina HOM05D006506 ORTHO05D007809 1.2e-130 470.3 320 72.5
Ciclev10027055m.g Citrus clementina HOM05D006506 ORTHO05D007809 4.9e-129 464.9 305 79.3
Solyc03g117530.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 2.4e-128 462.6 303 73.9
HPP92_007331 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.2e-127 460.3 317 71.0
ATR0605G102 Amborella trichopoda HOM05D006506 ORTHO05D007809 5.1e-126 454.9 320 70.6
SalBow2G1795 Salvia bowleyana HOM05D006506 ORTHO05D007809 2.8e-124 449.1 318 69.2
SGA_v2.0_scaffold37G14756 Striga asiatica HOM05D006506 ORTHO05D007809 1.1e-123 447.2 320 69.4
unitig_62.g23595 Utricularia gibba HOM05D006506 ORTHO05D007809 1.2e-122 443.7 320 68.1
Manes.11G058300 Manihot esculenta HOM05D006506 ORTHO05D007809 4.5e-122 441.8 258 85.7
Aqoxy7G02198 Aquilegia oxysepala HOM05D006506 ORTHO05D007809 7.6e-122 441.0 296 73.6
Migut.I00752 Erythranthe guttata HOM05D006506 ORTHO05D007809 2.1e-119 433.0 320 67.5
SEGI_33428 Sequoiadendron giganteum HOM05D006506 ORTHO05D007809 6.2e-116 421.4 319 64.6
THA.LOC104818016 Tarenaya hassleriana HOM05D006506 ORTHO05D007809 1.4e-115 420.2 258 81.8
Ah.08g214330 Amaranthus hybridus HOM05D006506 ORTHO05D007809 1.0e-110 404.1 318 62.9
Os04g0528400 Oryza sativa ssp. japonica HOM05D006506 ORTHO05D007809 1.0e-110 404.1 326 60.4
HPP92_007333 Vanilla planifolia HOM05D006506 ORTHO05D007809 1.0e-110 404.1 320 65.3
Ciclev10027054m.g Citrus clementina HOM05D006506 ORTHO05D007809 9.6e-109 397.5 257 81.3
AUR62030047 Chenopodium quinoa HOM05D006506 ORTHO05D007809 4.8e-108 395.2 319 62.7
AagrBONN_evm.TU.Sc2ySwM_117.4079 Anthoceros agrestis HOM05D006506 ORTHO05D007809 8.1e-108 394.4 316 60.4
EL10Ac7g17638 Beta vulgaris HOM05D006506 ORTHO05D007809 9.0e-107 391.0 311 63.0
Atru.chr1.2888 Acer truncatum HOM05D006506 ORTHO05D007809 7.6e-106 387.9 228 86.0
Pp3c1_24880 Physcomitrium patens HOM05D006506 ORTHO05D007809 5.7e-101 371.7 317 57.4
Lj9E498T1 Lonicera japonica HOM05D006506 ORTHO05D007809 3.4e-98 362.5 214 83.6
Mapoly0090s0026 Marchantia polymorpha HOM05D006506 ORTHO05D007809 3.4e-98 362.5 320 57.5
AUR62002633 Chenopodium quinoa HOM05D006506 ORTHO05D007809 5.0e-97 358.6 294 62.2
SMO115G0207 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 3.2e-96 355.9 317 54.3
Ciclev10027056m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.9e-95 351.3 306 64.4
Zm00001eb427100 Zea mays HOM05D006506 ORTHO05D007809 1.1e-93 347.4 327 52.9
CBR_g8656 Chara braunii HOM05D006506 ORTHO05D007809 1.1e-88 330.9 323 51.7
CDE11G1201 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 3.2e-88 329.3 285 61.1
Sc05g0005410 Simmondsia chinensis HOM05D006506 ORTHO05D007809 9.1e-83 311.2 285 56.5
CDE08G0717 Ceratophyllum demersum HOM05D006506 ORTHO05D007809 1.9e-80 303.5 214 69.6
Prupe.2G072500 Prunus persica HOM05D006506 ORTHO05D007809 1.1e-77 294.3 297 57.9
TPR.G26194 Trifolium pratense HOM05D002479 ORTHO05D007809 4.0e-46 189.5 161 61.5
Solyc04g026070.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.8e-38 164.1 121 64.5
Ciclev10027644m.g Citrus clementina HOM05D006506 ORTHO05D007809 7.0e-35 152.1 108 71.3
Cre12.g524350 Chlamydomonas reinhardtii HOM05D006506 ORTHO05D007809 7.8e-34 148.7 272 36.0
ATR0068G037 Amborella trichopoda HOM05D006506 ORTHO05D007809 1.9e-32 144.1 116 62.9
SMO018G0003 Selaginella moellendorffii HOM05D006506 ORTHO05D007809 5.2e-30 136.0 112 58.9
Ciclev10026990m.g Citrus clementina HOM05D006506 ORTHO05D007809 1.3e-28 131.3 108 66.7
PRCOL_00003381 Prasinoderma coloniale HOM05D006506 ORTHO05D007809 1.0e-25 121.7 355 28.7
Solyc08g044480.1 Solanum lycopersicum HOM05D006506 ORTHO05D007809 1.3e-25 121.3 115 53.0
Nn4g24996 Nelumbo nucifera HOM05D006506 ORTHO05D007809 4.7e-23 112.8 62 82.3
MBI08_g32097_MAGBIO Magnolia biondii HOM05D006506 ORTHO05D007809 1.4e-22 111.3 72 75.0
MCO05G139 Micromonas commoda HOM05D006506 ORTHO05D007809 1.1e-19 101.7 310 27.1
Mapoly1721s0002 Marchantia polymorpha HOM05D006506 ORTHO05D007809 6.9e-14 82.4 62 61.3


User provided reference genes

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