Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G083300 Prunus persica HOM05D001781 ORTHO05D001711 8.1e-72 273.5 124 100.0
Prupe.3G080200 Prunus persica HOM05D001781 ORTHO05D001711 1.2e-67 259.6 122 95.9
Prupe.3G080700 Prunus persica HOM05D001781 ORTHO05D001711 1.3e-66 256.1 120 95.8
MD17G1205200 Malus domestica HOM05D001781 ORTHO05D001711 1.4e-26 123.2 123 52.8
FvH4_6g30290 Fragaria vesca HOM05D025868 ORTHO05D001711 2.8e-16 89.0 121 43.0
FAN05G2755 Fragaria x ananassa HOM05D025868 ORTHO05D001711 6.3e-16 87.8 121 42.1
FAN02G3540 Fragaria x ananassa HOM05D025868 ORTHO05D001711 1.8e-15 86.3 121 42.1
RcHm_v2.0_Chr2g0136531 Rosa chinensis HOM05D025868 ORTHO05D001711 8.5e-13 77.4 104 42.3
GSVIVG01017255001 Vitis vinifera HOM05D001781 ORTHO05D001711 2.5e-12 75.9 123 38.2
Sc18g0000720 Simmondsia chinensis HOM05D001781 ORTHO05D001711 2.3e-10 69.3 106 38.7
Gorai.001G040700 Gossypium raimondii HOM05D001781 ORTHO05D001711 6.8e-10 67.8 114 39.5
Nn2g11963 Nelumbo nucifera HOM05D001781 ORTHO05D001711 6.8e-10 67.8 121 33.9
TAR625G1385 Trochodendron aralioides HOM05D001781 ORTHO05D001711 1.5e-09 66.6 136 32.4
MD17G1204700 Malus domestica HOM05D001781 ORTHO05D001711 2.0e-09 66.2 57 57.9
Duzib187G1560 Durio zibethinus HOM05D001781 ORTHO05D001711 2.6e-09 65.9 109 33.9
Thecc.09G122900 Theobroma cacao HOM05D001781 ORTHO05D001711 2.6e-09 65.9 115 34.8
Manes.11G052900 Manihot esculenta HOM05D001781 ORTHO05D001711 3.4e-09 65.5 89 39.3
COL.COLO4_05760 Corchorus olitorius HOM05D001781 ORTHO05D001711 5.7e-09 64.7 101 37.6
Duzib168G2385 Durio zibethinus HOM05D001781 ORTHO05D001711 5.7e-09 64.7 113 36.3
Gohir.D07G038700 Gossypium hirsutum HOM05D001781 ORTHO05D001711 5.7e-09 64.7 112 39.3
Ca_21697_v3 Cicer arietinum L. HOM05D001781 ORTHO05D001711 9.8e-09 63.9 108 29.6
RcHm_v2.0_Chr2g0089141 Rosa chinensis HOM05D001781 ORTHO05D001711 1.3e-08 63.5 101 35.6
Sc08g0006760 Simmondsia chinensis HOM05D001781 ORTHO05D001711 3.7e-08 62.0 92 41.3
CAN.G309.58 Capsicum annuum HOM05D001781 ORTHO05D001711 4.9e-08 61.6 125 31.2
Glyma.05G008400 Glycine max HOM05D001781 ORTHO05D001711 4.9e-08 61.6 126 29.4
TAR636G2048 Trochodendron aralioides HOM05D001781 ORTHO05D001711 4.9e-08 61.6 140 32.9
Glyma.17G116700 Glycine max HOM05D001781 ORTHO05D001711 1.1e-07 60.5 126 29.4
MBI06_g09277_MAGBIO Magnolia biondii HOM05D001781 ORTHO05D001711 1.1e-07 60.5 90 41.1
Cpa.g.c41482 Carica papaya HOM05D001781 ORTHO05D001711 1.4e-07 60.1 133 29.3
Psat4g040320 Pisum sativum HOM05D001781 ORTHO05D001711 1.4e-07 60.1 146 30.1
Psat4g041760 Pisum sativum HOM05D001781 ORTHO05D001711 1.8e-07 59.7 126 29.4
Medtr4g113970 Medicago truncatula HOM05D001781 ORTHO05D001711 2.4e-07 59.3 115 31.3
PSO455G0032 Papaver somniferum HOM05D001781 ORTHO05D001711 2.4e-07 59.3 139 33.1
VMungo1215G1152 Vigna mungo HOM05D001781 ORTHO05D001711 3.1e-07 58.9 126 30.2
Rhsim08G0216100 Rhododendron simsii HOM05D001781 ORTHO05D001711 4.1e-07 58.5 90 36.7
Gohir.A07G034784 Gossypium hirsutum HOM05D001781 ORTHO05D001711 5.4e-07 58.2 98 35.7
PSO170G3589 Papaver somniferum HOM05D001781 ORTHO05D001711 5.4e-07 58.2 63 54.0
Hund21486 Selenicereus undatus HOM05D001781 ORTHO05D001711 5.4e-07 58.2 122 36.1
Peaxi162Scf00591g00511 Petunia axillaris HOM05D001781 ORTHO05D001711 7.0e-07 57.8 128 30.5
Rhsim01G0076800 Rhododendron simsii HOM05D001781 ORTHO05D001711 7.0e-07 57.8 111 32.4
Dinv36549 Davidia involucrata HOM05D001781 ORTHO05D001711 9.2e-07 57.4 109 33.9
Manes.14G130400 Manihot esculenta HOM05D001781 ORTHO05D001711 9.2e-07 57.4 124 33.1
Nn8g39386 Nelumbo nucifera HOM05D001781 ORTHO05D001711 9.2e-07 57.4 114 33.3
Prupe.7G239500 Prunus persica HOM05D001781 ORTHO05D001711 9.2e-07 57.4 100 36.0
PGR044G0682 Punica granatum HOM05D001781 ORTHO05D001711 9.2e-07 57.4 120 32.5
FAN23G0992 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.2e-06 57.0 91 37.4
FAN26G1253 Fragaria x ananassa HOM05D001781 ORTHO05D001711 1.2e-06 57.0 91 37.4
TWI34G1451 Tripterygium wilfordii HOM05D001781 ORTHO05D001711 1.2e-06 57.0 92 39.1
vmacro18965 Vaccinium macrocarpon HOM05D001781 ORTHO05D001711 1.2e-06 57.0 93 35.5
Cpa.g.sc75.57 Carica papaya HOM05D001781 ORTHO05D001711 1.6e-06 56.6 49 49.0
Cc06_g08800 Coffea canephora HOM05D001781 ORTHO05D001711 1.6e-06 56.6 61 39.3
FvH4_1g03610 Fragaria vesca HOM05D001781 ORTHO05D001711 1.6e-06 56.6 100 36.0
FAN19G3215 Fragaria x ananassa HOM05D001781 ORTHO05D001711 1.6e-06 56.6 100 36.0
FAN28G1355 Fragaria x ananassa HOM05D004174 ORTHO05D004624 1.6e-06 56.6 100 36.0
MD15G1175900 Malus domestica HOM05D001781 ORTHO05D001711 1.6e-06 56.6 86 37.2
Potri.004G169500 Populus trichocarpa HOM05D001781 ORTHO05D001711 1.6e-06 56.6 104 30.8
THA.LOC104809002 Tarenaya hassleriana HOM05D001781 ORTHO05D001711 1.6e-06 56.6 59 42.4
Lalb_Chr13g0301961 Lupinus albus HOM05D001781 ORTHO05D001711 2.7e-06 55.8 42 52.4
PSO210G1936 Papaver somniferum HOM05D001781 ORTHO05D001711 2.7e-06 55.8 37 56.8
TPR.G10694 Trifolium pratense HOM05D004174 ORTHO05D004624 2.7e-06 55.8 114 27.2
Solyc11g070070.3 Solanum lycopersicum HOM05D001781 ORTHO05D001711 3.5e-06 55.5 54 44.4
Sopen11g028750 Solanum pennellii HOM05D001781 ORTHO05D001711 3.5e-06 55.5 54 44.4
PGSC0003DMG400025515 Solanum tuberosum HOM05D001781 ORTHO05D001711 3.5e-06 55.5 54 44.4
CSS0022836 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 4.5e-06 55.1 98 33.7
CSS0038934 Camellia sinensis var. sinensis HOM05D001781 ORTHO05D001711 4.5e-06 55.1 98 33.7
AUR62011086 Chenopodium quinoa HOM05D001781 ORTHO05D001711 5.9e-06 54.7 39 61.5
AUR62033468 Chenopodium quinoa HOM05D001781 ORTHO05D001711 5.9e-06 54.7 39 61.5
ClCG11G002860 Citrullus lanatus HOM05D001781 ORTHO05D001711 5.9e-06 54.7 98 33.7
Sabra04G0113600 Salix brachista HOM05D001781 ORTHO05D001711 5.9e-06 54.7 101 33.7
Phvul.003G162600 Phaseolus vulgaris HOM05D001781 ORTHO05D001711 7.7e-06 54.3 126 27.8
SHI22515 Sapria himalayana HOM05D001781 ORTHO05D001711 7.7e-06 54.3 59 42.4


User provided reference genes

Program Settings