Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G079500 Prunus persica HOM05D002740 ORTHO05D003126 1.7e-78 295.8 139 100.0
AUR62000632 Chenopodium quinoa HOM05D002740 ORTHO05D003126 3.5e-15 85.5 132 37.9
EL10Ac4g09762 Beta vulgaris HOM05D002740 ORTHO05D003126 4.6e-15 85.1 134 38.1
AUR62006985 Chenopodium quinoa HOM05D002740 ORTHO05D003126 4.6e-15 85.1 132 37.9
Nitab4.5_0010891g0030 Nicotiana tabacum HOM05D002740 ORTHO05D003126 4.6e-15 85.1 136 35.3
Nitab4.5_0000476g0220 Nicotiana tabacum HOM05D002740 ORTHO05D003126 6.0e-15 84.7 133 35.3
Duzib177G0935 Durio zibethinus HOM05D002740 ORTHO05D003126 7.8e-15 84.3 133 37.6
Ah.02g118370 Amaranthus hybridus HOM05D002740 ORTHO05D003126 1.7e-14 83.2 132 36.4
FAN05G0538 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.7e-14 83.2 120 39.2
Eucgr.A01666 Eucalyptus grandis HOM05D002740 ORTHO05D003126 2.3e-14 82.8 131 38.2
Duzib106G0100 Durio zibethinus HOM05D002740 ORTHO05D003126 6.6e-14 81.3 119 38.7
Duzib128G1958 Durio zibethinus HOM05D002740 ORTHO05D003126 6.6e-14 81.3 133 35.3
FvH4_6g01520 Fragaria vesca HOM05D002740 ORTHO05D003126 6.6e-14 81.3 120 38.3
FAN05G2066 Fragaria x ananassa HOM05D002740 ORTHO05D003126 6.6e-14 81.3 120 38.3
RcHm_v2.0_Chr3g0449211 Rosa chinensis HOM05D002740 ORTHO05D003126 8.7e-14 80.9 120 37.5
Ah.06g187970 Amaranthus hybridus HOM05D002740 ORTHO05D003126 1.5e-13 80.1 132 35.6
CAN.G694.8 Capsicum annuum HOM05D002740 ORTHO05D003126 1.5e-13 80.1 133 34.6
SHI23917 Sapria himalayana HOM05D002740 ORTHO05D003126 1.5e-13 80.1 127 36.2
Lsat_1_v5_gn_2_16740 Lactuca sativa HOM05D002740 ORTHO05D003126 1.9e-13 79.7 136 36.8
Peaxi162Scf00156g00620 Petunia axillaris HOM05D002740 ORTHO05D003126 1.9e-13 79.7 133 36.1
Potri.019G022700 Populus trichocarpa HOM05D002740 ORTHO05D003126 1.9e-13 79.7 132 37.9
Cpa.g.sc87.31 Carica papaya HOM05D002740 ORTHO05D003126 2.5e-13 79.3 120 37.5
HanXRQChr14g0431491 Helianthus annuus HOM05D002740 ORTHO05D003126 4.3e-13 78.6 133 35.3
COL.COLO4_15534 Corchorus olitorius HOM05D002740 ORTHO05D003126 5.6e-13 78.2 121 38.0
Lj1A74G101 Lonicera japonica HOM05D002740 ORTHO05D003126 5.6e-13 78.2 133 34.6
MD12G1250300 Malus domestica HOM05D002740 ORTHO05D003126 5.6e-13 78.2 120 36.7
SalBow1G0650 Salvia bowleyana HOM05D002740 ORTHO05D003126 5.6e-13 78.2 131 34.4
MD04G1232700 Malus domestica HOM05D002740 ORTHO05D003126 7.3e-13 77.8 132 34.8
SalBow1G8628 Salvia bowleyana HOM05D002740 ORTHO05D003126 7.3e-13 77.8 131 34.4
Potri.013G049300 Populus trichocarpa HOM05D002740 ORTHO05D003126 9.6e-13 77.4 128 37.5
Haze_04394 Corylus avellana HOM05D002740 ORTHO05D003126 1.3e-12 77.0 132 36.4
FAN14G4679 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.3e-12 77.0 120 37.5
TAR365G0402 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.3e-12 77.0 133 35.3
ECA238G0995 Erigeron canadensis HOM05D002740 ORTHO05D003126 1.6e-12 76.6 133 35.3
FAN14G2846 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.6e-12 76.6 120 37.5
Glyma.20G226700 Glycine max HOM05D002740 ORTHO05D003126 1.6e-12 76.6 132 34.8
Lj2A46T69 Lonicera japonica HOM05D002740 ORTHO05D003126 1.6e-12 76.6 133 37.6
Peaxi162Scf00077g00094 Petunia axillaris HOM05D002740 ORTHO05D003126 1.6e-12 76.6 133 33.1
Glyma.10G164300 Glycine max HOM05D002740 ORTHO05D003126 2.1e-12 76.3 132 34.8
Gohir.A11G244600 Gossypium hirsutum HOM05D002740 ORTHO05D003126 2.1e-12 76.3 134 35.8
Lj5g0022875 Lotus japonicus HOM05D002740 ORTHO05D003126 2.1e-12 76.3 120 36.7
Prupe.6G352500 Prunus persica HOM05D002740 ORTHO05D003126 2.1e-12 76.3 132 34.8
CiPaw.04G190900 Carya illinoinensis HOM05D002740 ORTHO05D003126 2.8e-12 75.9 120 36.7
ECA233G3395 Erigeron canadensis HOM05D002740 ORTHO05D003126 2.8e-12 75.9 132 34.1
TWI32G1314 Tripterygium wilfordii HOM05D002740 ORTHO05D003126 2.8e-12 75.9 119 39.5
vmacro02711 Vaccinium macrocarpon HOM05D002740 ORTHO05D003126 2.8e-12 75.9 122 38.5
Dinv19266 Davidia involucrata HOM05D002740 ORTHO05D003126 4.8e-12 75.1 133 34.6
Gohir.D11G254700 Gossypium hirsutum HOM05D002740 ORTHO05D003126 4.8e-12 75.1 134 35.8
Gorai.007G273300 Gossypium raimondii HOM05D002740 ORTHO05D003126 4.8e-12 75.1 134 35.8
PGR004G1282 Punica granatum HOM05D002740 ORTHO05D003126 4.8e-12 75.1 132 33.3
Sabra13G0045500 Salix brachista HOM05D002740 ORTHO05D003126 4.8e-12 75.1 128 36.7
Hund07176 Selenicereus undatus HOM05D002740 ORTHO05D003126 4.8e-12 75.1 139 36.0
THA.LOC104823789 Tarenaya hassleriana HOM05D002740 ORTHO05D003126 4.8e-12 75.1 120 39.2
Thecc.05G266800 Theobroma cacao HOM05D002740 ORTHO05D003126 4.8e-12 75.1 121 36.4
TAR365G1151 Trochodendron aralioides HOM05D002740 ORTHO05D003126 4.8e-12 75.1 133 34.6
TAR636G2335 Trochodendron aralioides HOM05D002740 ORTHO05D003126 4.8e-12 75.1 133 34.6
CSS0008679 Camellia sinensis var. sinensis HOM05D002740 ORTHO05D003126 6.2e-12 74.7 133 34.6
CiPaw.03G271200 Carya illinoinensis HOM05D002740 ORTHO05D003126 6.2e-12 74.7 132 34.8
Sopen04g020910 Solanum pennellii HOM05D002740 ORTHO05D003126 6.2e-12 74.7 132 32.6
TWI75G0335 Tripterygium wilfordii HOM05D002740 ORTHO05D003126 6.2e-12 74.7 120 37.5
Manes.13G039600 Manihot esculenta HOM05D002740 ORTHO05D003126 8.1e-12 74.3 121 38.8
TAR633G0934 Trochodendron aralioides HOM05D002740 ORTHO05D003126 8.1e-12 74.3 120 36.7
DCAR_005516 Daucus carota HOM05D002740 ORTHO05D003126 1.1e-11 73.9 132 36.4
MD05G1188600 Malus domestica HOM05D002740 ORTHO05D003126 1.1e-11 73.9 133 33.1
Nitab4.5_0000841g0010 Nicotiana tabacum HOM05D002740 ORTHO05D003126 1.1e-11 73.9 133 33.1
TAR362G1135 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.1e-11 73.9 133 34.6
Actinidia37553 Actinidia chinensis HOM05D002740 ORTHO05D003126 1.4e-11 73.6 120 36.7
Aa31LG2G2010 Aethionema arabicum HOM05D002740 ORTHO05D003126 1.4e-11 73.6 126 34.9
Aa31LG9G18030 Aethionema arabicum HOM05D002740 ORTHO05D003126 1.4e-11 73.6 121 37.2
HanXRQChr11g0327251 Helianthus annuus HOM05D002740 ORTHO05D003126 1.4e-11 73.6 118 36.4
Hma1.2p1_0130F.1_g060480 Hydrangea macrophylla HOM05D002740 ORTHO05D003126 1.4e-11 73.6 133 34.6
Prupe.8G215100 Prunus persica HOM05D002740 ORTHO05D003126 1.4e-11 73.6 135 32.6
TWI60G0984 Tripterygium wilfordii HOM05D002740 ORTHO05D003126 1.4e-11 73.6 119 39.5
Ca_10029_v3 Cicer arietinum L. HOM05D002740 ORTHO05D003126 1.8e-11 73.2 120 36.7
Migut.F02056 Erythranthe guttata HOM05D002740 ORTHO05D003126 1.8e-11 73.2 126 35.7
Eucgr.H04213 Eucalyptus grandis HOM05D002740 ORTHO05D003126 1.8e-11 73.2 133 33.8
Lj8A197T38 Lonicera japonica HOM05D002740 ORTHO05D003126 1.8e-11 73.2 144 35.4
Manes.09G146900 Manihot esculenta HOM05D002740 ORTHO05D003126 1.8e-11 73.2 133 35.3
Oeu014442.1 Olea europaea HOM05D002740 ORTHO05D003126 1.8e-11 73.2 132 34.8
PSO832G0576 Papaver somniferum HOM05D002740 ORTHO05D003126 1.8e-11 73.2 136 34.6
Solyc04g050190.4 Solanum lycopersicum HOM05D002740 ORTHO05D003126 1.8e-11 73.2 132 32.6
GSVIVG01001480001 Vitis vinifera HOM05D002740 ORTHO05D003126 1.8e-11 73.2 133 34.6
Ciclev10030905m.g Citrus clementina HOM05D002740 ORTHO05D003126 2.4e-11 72.8 132 34.8
Cc09_g02980 Coffea canephora HOM05D002740 ORTHO05D003126 2.4e-11 72.8 132 34.8
FAN09G1477 Fragaria x ananassa HOM05D002740 ORTHO05D003126 2.4e-11 72.8 120 36.7
PSO764G0261 Papaver somniferum HOM05D002740 ORTHO05D003126 2.4e-11 72.8 136 34.6
CSS0008677 Camellia sinensis var. sinensis HOM05D002740 ORTHO05D003126 3.1e-11 72.4 119 37.0
Psat6g144200 Pisum sativum HOM05D002740 ORTHO05D003126 3.1e-11 72.4 84 45.2
TPR.G26625 Trifolium pratense HOM05D002740 ORTHO05D003126 3.1e-11 72.4 120 35.8
Gohir.A08G217800 Gossypium hirsutum HOM05D002740 ORTHO05D003126 4.0e-11 72.0 137 34.3
Phvul.008G137801 Phaseolus vulgaris HOM05D002740 ORTHO05D003126 4.0e-11 72.0 120 35.0
Solyc09g064510.3 Solanum lycopersicum HOM05D002740 ORTHO05D003126 4.0e-11 72.0 135 33.3
Cpa.g.sc51.3 Carica papaya HOM05D002740 ORTHO05D003126 5.3e-11 71.6 120 35.8
Lalb_Chr02g0148991 Lupinus albus HOM05D002740 ORTHO05D003126 5.3e-11 71.6 132 34.1
Nn3g19799 Nelumbo nucifera HOM05D002740 ORTHO05D003126 5.3e-11 71.6 133 36.1
Dinv07505 Davidia involucrata HOM05D002740 ORTHO05D003126 9.0e-11 70.9 133 35.3
Atru.chr2.1110 Acer truncatum HOM05D002740 ORTHO05D003126 1.2e-10 70.5 84 45.2
CAN.G94.6 Capsicum annuum HOM05D002740 ORTHO05D003126 1.2e-10 70.5 132 33.3
CiPaw.07G070800 Carya illinoinensis HOM05D002740 ORTHO05D003126 1.2e-10 70.5 132 34.1
Gohir.D08G234800 Gossypium hirsutum HOM05D002740 ORTHO05D003126 1.2e-10 70.5 132 33.3
Gorai.004G249600 Gossypium raimondii HOM05D002740 ORTHO05D003126 1.2e-10 70.5 132 33.3
vmacro19980 Vaccinium macrocarpon HOM05D002740 ORTHO05D003126 1.5e-10 70.1 123 36.6
MSTRG.8171 Avicennia marina HOM05D002740 ORTHO05D003126 2.6e-10 69.3 135 33.3
CANSAT54G3003 Cannabis sativa HOM05D002740 ORTHO05D003126 2.6e-10 69.3 120 36.7
ClCG03G011470 Citrullus lanatus HOM05D002740 ORTHO05D003126 2.6e-10 69.3 120 35.8
QL09p041531 Quercus lobata HOM05D002740 ORTHO05D003126 2.6e-10 69.3 120 34.2
Thecc.01G249900 Theobroma cacao HOM05D002740 ORTHO05D003126 2.6e-10 69.3 121 38.0
arahy.Tifrunner.gnm1.ann1.33UQPP Arachis hypogaea HOM05D002740 ORTHO05D003126 3.4e-10 68.9 84 42.9
arahy.Tifrunner.gnm1.ann1.JB472D Arachis hypogaea HOM05D002740 ORTHO05D003126 3.4e-10 68.9 84 42.9
Lsat_1_v5_gn_8_2520 Lactuca sativa HOM05D002740 ORTHO05D003126 3.4e-10 68.9 118 34.7
Manes.08G140900 Manihot esculenta HOM05D002740 ORTHO05D003126 3.4e-10 68.9 84 42.9
Peaxi162Scf00043g00272 Petunia axillaris HOM05D002740 ORTHO05D003126 3.4e-10 68.9 86 43.0
MSTRG.12516 Avicennia marina HOM05D002740 ORTHO05D003126 4.4e-10 68.6 134 34.3
Manes.08G141500 Manihot esculenta HOM05D002740 ORTHO05D003126 4.4e-10 68.6 84 42.9
Sopen05g034300 Solanum pennellii HOM05D002740 ORTHO05D003126 4.4e-10 68.6 120 30.0
HPP92_025821 Vanilla planifolia HOM05D002740 ORTHO05D003126 4.4e-10 68.6 119 33.6
VMungo0720G1032 Vigna mungo HOM05D002740 ORTHO05D003126 4.4e-10 68.6 118 33.9
Actinidia39980 Actinidia chinensis HOM05D002740 ORTHO05D003126 5.8e-10 68.2 112 37.5
CARHR217090 Cardamine hirsuta HOM05D002740 ORTHO05D003126 5.8e-10 68.2 122 34.4
Oeu010185.1 Olea europaea HOM05D002740 ORTHO05D003126 5.8e-10 68.2 133 33.8
Sp7g07700 Schrenkiella parvula HOM05D002740 ORTHO05D003126 5.8e-10 68.2 122 35.2
Aqoxy5G00131 Aquilegia oxysepala HOM05D002740 ORTHO05D003126 7.6e-10 67.8 84 41.7
BcaC07g37707 Brassica carinata HOM05D002740 ORTHO05D003126 7.6e-10 67.8 121 35.5
A08p10090 Brassica napus HOM05D002740 ORTHO05D003126 7.6e-10 67.8 121 35.5
BolC8t48073H Brassica oleracea HOM05D002740 ORTHO05D003126 7.6e-10 67.8 121 35.5
BraA08t33006Z Brassica rapa HOM05D002740 ORTHO05D003126 7.6e-10 67.8 121 35.5
CSS0021606 Camellia sinensis var. sinensis HOM05D002740 ORTHO05D003126 7.6e-10 67.8 121 35.5
Haze_24709 Corylus avellana HOM05D002740 ORTHO05D003126 7.6e-10 67.8 120 33.3
MELO3C010087.2 Cucumis melo HOM05D002740 ORTHO05D003126 7.6e-10 67.8 120 34.2
Solyc05g055900.3 Solanum lycopersicum HOM05D002740 ORTHO05D003126 7.6e-10 67.8 120 30.8
Sopen09g025670 Solanum pennellii HOM05D002740 ORTHO05D003126 7.6e-10 67.8 135 34.1
AT5G32470 Arabidopsis thaliana HOM05D002740 ORTHO05D003126 9.9e-10 67.4 123 34.1
Duzib138G0150 Durio zibethinus HOM05D002740 ORTHO05D003126 9.9e-10 67.4 120 37.5
PGSC0003DMG400008580 Solanum tuberosum HOM05D002740 ORTHO05D003126 9.9e-10 67.4 86 41.9
ATR0787G107 Amborella trichopoda HOM05D002740 ORTHO05D003126 1.3e-09 67.0 122 36.1
Thhalv10002337m.g Eutrema salsugineum HOM05D002740 ORTHO05D003126 1.3e-09 67.0 122 33.6
FAN24G0357 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.3e-09 67.0 126 34.9
PSO063G5378 Papaver somniferum HOM05D002740 ORTHO05D003126 1.3e-09 67.0 85 42.4
AL7G43640 Arabidopsis lyrata HOM05D002740 ORTHO05D003126 1.7e-09 66.6 122 33.6
BcaB04g18093 Brassica carinata HOM05D002740 ORTHO05D003126 1.7e-09 66.6 124 34.7
Cfa002487 Carpinus fangiana HOM05D002740 ORTHO05D003126 1.7e-09 66.6 120 32.5
CDE02G1172 Ceratophyllum demersum HOM05D002740 ORTHO05D003126 1.7e-09 66.6 121 35.5
CsaV3_1G045030 Cucumis sativus L. HOM05D002740 ORTHO05D003126 1.7e-09 66.6 120 33.3
Sc16g0010200 Simmondsia chinensis HOM05D002740 ORTHO05D003126 1.7e-09 66.6 112 34.8
Carub.0007s3054 Capsella rubella HOM05D002740 ORTHO05D003126 2.2e-09 66.2 122 34.4
CAN.G536.13 Capsicum annuum HOM05D002740 ORTHO05D003126 2.2e-09 66.2 86 39.5
FvH4_2g20480 Fragaria vesca HOM05D002740 ORTHO05D003126 2.2e-09 66.2 126 34.9
FAN15G0236 Fragaria x ananassa HOM05D002740 ORTHO05D003126 2.2e-09 66.2 126 34.9
FAN27G2178 Fragaria x ananassa HOM05D002740 ORTHO05D003126 2.2e-09 66.2 126 34.9
Lsat_1_v5_gn_9_11541 Lactuca sativa HOM05D002740 ORTHO05D003126 2.9e-09 65.9 118 36.4
HanXRQChr14g0443151 Helianthus annuus HOM05D002740 ORTHO05D003126 4.9e-09 65.1 133 32.3
PSO478G3100 Papaver somniferum HOM05D002740 ORTHO05D003126 4.9e-09 65.1 88 38.6
unitig_88.g27819 Utricularia gibba HOM05D002740 ORTHO05D003126 4.9e-09 65.1 133 30.1
Duzib133G0998 Durio zibethinus HOM05D002740 ORTHO05D003126 6.4e-09 64.7 119 37.0
RcHm_v2.0_Chr5g0058131 Rosa chinensis HOM05D002740 ORTHO05D003126 6.4e-09 64.7 84 40.5
RcHm_v2.0_Chr6g0286581 Rosa chinensis HOM05D002740 ORTHO05D003126 6.4e-09 64.7 126 33.3
Sed0005304 Sechium edule HOM05D002740 ORTHO05D003126 6.4e-09 64.7 139 33.8
SalBow6G3005 Salvia bowleyana HOM05D002740 ORTHO05D003126 1.1e-08 63.9 132 31.1
SGA_v2.0_scaffold42G16173 Striga asiatica HOM05D002740 ORTHO05D003126 1.1e-08 63.9 84 40.5
Gohir.D07G158800 Gossypium hirsutum HOM05D002740 ORTHO05D003126 1.4e-08 63.5 120 34.2
Gorai.001G182000 Gossypium raimondii HOM05D002740 ORTHO05D003126 1.4e-08 63.5 120 34.2
Nitab4.5_0000845g0210 Nicotiana tabacum HOM05D002740 ORTHO05D003126 1.4e-08 63.5 86 40.7
Nitab4.5_0002435g0030 Nicotiana tabacum HOM05D002740 ORTHO05D003126 1.4e-08 63.5 86 40.7
Os08g0566000 Oryza sativa ssp. japonica HOM05D002740 ORTHO05D003126 1.4e-08 63.5 120 34.2
Gohir.A07G152600 Gossypium hirsutum HOM05D002740 ORTHO05D003126 1.9e-08 63.2 121 34.7
HanXRQChr10g0280201 Helianthus annuus HOM05D002740 ORTHO05D003126 1.9e-08 63.2 84 40.5
PSO782G3433 Papaver somniferum HOM05D002740 ORTHO05D003126 1.9e-08 63.2 84 38.1
Migut.N02233 Erythranthe guttata HOM05D002740 ORTHO05D003126 2.4e-08 62.8 84 38.1
Zm00001eb038600 Zea mays HOM05D002740 ORTHO05D003126 4.2e-08 62.0 132 31.1
Zm00001eb175630 Zea mays HOM05D002740 ORTHO05D003126 4.2e-08 62.0 120 31.7
PSO782G0519 Papaver somniferum HOM05D002740 ORTHO05D003126 5.4e-08 61.6 84 40.5
Sc22g0004590 Simmondsia chinensis HOM05D002740 ORTHO05D003126 9.3e-08 60.8 131 32.8
GSVIVG01028433001 Vitis vinifera HOM05D002740 ORTHO05D003126 1.6e-07 60.1 135 33.3
MBI16_g02733_MAGBIO Magnolia biondii HOM05D002740 ORTHO05D003126 2.7e-07 59.3 100 37.0
AagrBONN_evm.TU.Sc2ySwM_228.5260 Anthoceros agrestis HOM05D002740 ORTHO05D003126 1.0e-06 57.4 132 32.6
AagrBONN_evm.TU.Sc2ySwM_228.5264 Anthoceros agrestis HOM05D002740 ORTHO05D003126 1.0e-06 57.4 132 32.6
Ciclev10023610m.g Citrus clementina HOM05D002740 ORTHO05D003126 1.0e-06 57.4 90 40.0
PSO478G0119 Papaver somniferum HOM05D002740 ORTHO05D003126 1.3e-06 57.0 83 34.9
Medtr1g080470 Medicago truncatula HOM05D002740 ORTHO05D003126 2.3e-06 56.2 87 36.8
CDE02G0381 Ceratophyllum demersum HOM05D002740 ORTHO05D003126 3.9e-06 55.5 115 32.2
Nn1g02994 Nelumbo nucifera HOM05D002740 ORTHO05D003126 3.9e-06 55.5 90 38.9
HPP92_022080 Vanilla planifolia HOM05D002740 ORTHO05D003126 3.9e-06 55.5 134 29.1
PSO478G5084 Papaver somniferum HOM05D002740 ORTHO05D003126 5.1e-06 55.1 92 35.9
PSO017G4785 Papaver somniferum HOM05D002740 ORTHO05D003126 8.7e-06 54.3 92 35.9
PSO478G3934 Papaver somniferum HOM05D002740 ORTHO05D003126 8.7e-06 54.3 92 35.9


User provided reference genes

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