Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G079400 Prunus persica HOM05D002740 ORTHO05D335959 5.3e-156 554.3 278 100.0
Ciclev10030905m.g Citrus clementina HOM05D002740 ORTHO05D003126 1.7e-13 80.9 258 27.5
CANSAT54G3003 Cannabis sativa HOM05D002740 ORTHO05D003126 3.0e-13 80.1 255 26.7
RcHm_v2.0_Chr3g0449211 Rosa chinensis HOM05D002740 ORTHO05D003126 5.6e-12 75.9 254 27.2
Atru.chr2.1110 Acer truncatum HOM05D002740 ORTHO05D003126 9.5e-12 75.1 258 26.0
FvH4_6g01520 Fragaria vesca HOM05D002740 ORTHO05D003126 1.2e-11 74.7 254 26.8
FAN14G2846 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.2e-11 74.7 254 26.8
FAN05G0538 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.6e-11 74.3 254 26.8
FAN05G2066 Fragaria x ananassa HOM05D002740 ORTHO05D003126 1.6e-11 74.3 254 26.8
Prupe.6G352500 Prunus persica HOM05D002740 ORTHO05D003126 2.1e-11 73.9 245 25.3
CAN.G94.6 Capsicum annuum HOM05D002740 ORTHO05D003126 2.8e-11 73.6 280 25.0
Gohir.D11G254700 Gossypium hirsutum HOM05D002740 ORTHO05D003126 2.8e-11 73.6 229 26.2
Gorai.007G273300 Gossypium raimondii HOM05D002740 ORTHO05D003126 2.8e-11 73.6 229 26.2
Dinv07505 Davidia involucrata HOM05D002740 ORTHO05D003126 4.7e-11 72.8 243 25.9
FAN09G1477 Fragaria x ananassa HOM05D002740 ORTHO05D003126 6.2e-11 72.4 254 26.4
HanXRQChr14g0443151 Helianthus annuus HOM05D002740 ORTHO05D003126 6.2e-11 72.4 244 25.4
Nitab4.5_0000841g0010 Nicotiana tabacum HOM05D002740 ORTHO05D003126 6.2e-11 72.4 253 26.9
DCAR_005516 Daucus carota HOM05D002740 ORTHO05D003126 1.1e-10 71.6 230 24.8
Nn3g19799 Nelumbo nucifera HOM05D002740 ORTHO05D003126 1.1e-10 71.6 233 25.8
Actinidia06833 Actinidia chinensis HOM05D002740 ORTHO05D003126 1.4e-10 71.2 227 26.4
MD04G1232700 Malus domestica HOM05D002740 ORTHO05D003126 1.8e-10 70.9 255 26.3
Gohir.A11G244600 Gossypium hirsutum HOM05D002740 ORTHO05D003126 2.3e-10 70.5 229 25.8
MD12G1250300 Malus domestica HOM05D002740 ORTHO05D003126 2.3e-10 70.5 244 25.4
Sopen04g020910 Solanum pennellii HOM05D002740 ORTHO05D003126 3.1e-10 70.1 241 26.1
COL.COLO4_15534 Corchorus olitorius HOM05D002740 ORTHO05D003126 6.8e-10 68.9 242 25.2
Nn1g02994 Nelumbo nucifera HOM05D002740 ORTHO05D003126 1.2e-09 68.2 255 25.1
QL03p029148 Quercus lobata HOM05D002740 ORTHO05D003126 1.2e-09 68.2 232 25.4
Solyc04g050190.4 Solanum lycopersicum HOM05D002740 ORTHO05D003126 1.2e-09 68.2 241 25.3
Thecc.05G266800 Theobroma cacao HOM05D002740 ORTHO05D003126 1.2e-09 68.2 229 24.9
Eucgr.H04213 Eucalyptus grandis HOM05D002740 ORTHO05D003126 1.5e-09 67.8 248 22.6
TAR633G0934 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.5e-09 67.8 244 23.4
Lj2A46T69 Lonicera japonica HOM05D002740 ORTHO05D003126 2.0e-09 67.4 230 25.2
Nitab4.5_0002088g0010 Nicotiana tabacum HOM05D002740 ORTHO05D003126 2.0e-09 67.4 253 26.1
Oeu010185.1 Olea europaea HOM05D002740 ORTHO05D003126 2.0e-09 67.4 243 23.9
PSO478G0119 Papaver somniferum HOM05D002740 ORTHO05D003126 2.0e-09 67.4 251 26.3
Duzib128G1958 Durio zibethinus HOM05D002740 ORTHO05D003126 2.6e-09 67.0 244 25.0
Lalb_Chr02g0148991 Lupinus albus HOM05D002740 ORTHO05D003126 3.4e-09 66.6 227 22.9
Aqoxy5G00131 Aquilegia oxysepala HOM05D002740 ORTHO05D003126 5.8e-09 65.9 243 24.3
FAN14G4679 Fragaria x ananassa HOM05D002740 ORTHO05D003126 5.8e-09 65.9 263 25.9
Cc09_g02980 Coffea canephora HOM05D002740 ORTHO05D003126 9.8e-09 65.1 242 24.4
MBI07_g08913_MAGBIO Magnolia biondii HOM05D004684 ORTHO05D006904 1.7e-08 64.3 242 25.6
TAR362G1135 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.7e-08 64.3 242 24.0
Haze_04394 Corylus avellana HOM05D002740 ORTHO05D003126 2.2e-08 63.9 232 25.9
TAR365G0402 Trochodendron aralioides HOM05D002740 ORTHO05D003126 2.2e-08 63.9 254 23.6
FAN15G0236 Fragaria x ananassa HOM05D002740 ORTHO05D003126 3.7e-08 63.2 262 24.8
PSO832G0576 Papaver somniferum HOM05D002740 ORTHO05D003126 3.7e-08 63.2 232 24.1
FvH4_2g20480 Fragaria vesca HOM05D002740 ORTHO05D003126 4.9e-08 62.8 262 24.0
FAN24G0357 Fragaria x ananassa HOM05D002740 ORTHO05D003126 4.9e-08 62.8 262 24.0
Lsat_1_v5_gn_8_2520 Lactuca sativa HOM05D002740 ORTHO05D003126 6.4e-08 62.4 239 23.0
Manes.08G141500 Manihot esculenta HOM05D002740 ORTHO05D003126 8.3e-08 62.0 255 23.9
TAR365G1151 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.1e-07 61.6 254 23.2
PSO764G0261 Papaver somniferum HOM05D002740 ORTHO05D003126 1.4e-07 61.2 232 23.7
TAR636G2335 Trochodendron aralioides HOM05D002740 ORTHO05D003126 1.4e-07 61.2 245 25.3
Sc09g0001850 Simmondsia chinensis HOM05D002740 ORTHO05D003126 5.4e-07 59.3 228 23.2
Gorai.004G249600 Gossypium raimondii HOM05D002740 ORTHO05D003126 7.1e-07 58.9 228 24.6
Duzib177G0935 Durio zibethinus HOM05D002740 ORTHO05D003126 9.2e-07 58.5 209 25.4
Lsat_1_v5_gn_2_16740 Lactuca sativa HOM05D002740 ORTHO05D003126 9.2e-07 58.5 233 22.7
Gohir.D08G234800 Gossypium hirsutum HOM05D002740 ORTHO05D003126 1.2e-06 58.2 228 23.7
Duzib106G0100 Durio zibethinus HOM05D002740 ORTHO05D003126 1.6e-06 57.8 231 22.1
Aa31LG9G18030 Aethionema arabicum HOM05D002740 ORTHO05D003126 2.1e-06 57.4 245 24.1
CSS0008679 Camellia sinensis var. sinensis HOM05D002740 ORTHO05D003126 6.0e-06 55.8 236 24.2
Nitab4.5_0010891g0030 Nicotiana tabacum HOM05D002740 ORTHO05D003126 6.0e-06 55.8 241 22.4
Nitab4.5_0000476g0220 Nicotiana tabacum HOM05D002740 ORTHO05D003126 7.8e-06 55.5 241 23.2


User provided reference genes

Program Settings