Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G073700 Prunus persica HOM05D004831 ORTHO05D003975 0.0e+00 1404.0 735 100.0
RcHm_v2.0_Chr2g0137511 Rosa chinensis HOM05D004831 ORTHO05D003975 1.5e-160 570.9 736 51.0
MD17G1197700 Malus domestica HOM05D004831 ORTHO05D003975 9.8e-149 531.6 830 45.1
Dinv30528 Davidia involucrata HOM05D004831 ORTHO05D003975 4.3e-144 516.2 764 45.0
FAN09G2060 Fragaria x ananassa HOM05D004831 ORTHO05D003975 4.4e-141 506.1 768 45.4
FAN14G0810 Fragaria x ananassa HOM05D004831 ORTHO05D003975 6.4e-140 502.3 775 45.5
QL05p025363 Quercus lobata HOM05D004831 ORTHO05D003975 1.2e-133 481.5 762 43.8
CANSAT56G2043 Cannabis sativa HOM05D004831 ORTHO05D003975 7.5e-133 478.8 766 43.3
GSVIVG01017152001 Vitis vinifera HOM05D004831 ORTHO05D003975 7.6e-125 452.2 906 37.6
Atru.chr1.3226 Acer truncatum HOM05D004831 ORTHO05D003975 1.4e-123 448.0 830 39.4
Dinv38059 Davidia involucrata HOM05D004831 ORTHO05D003975 1.9e-123 447.6 762 41.3
FvH4_6g30920 Fragaria vesca HOM05D004831 ORTHO05D003975 4.6e-122 443.0 775 42.3
Cfa002050 Carpinus fangiana HOM05D004831 ORTHO05D003975 3.9e-121 439.9 926 37.8
ClCG09G002300 Citrullus lanatus HOM05D004831 ORTHO05D003975 1.4e-118 431.4 758 41.8
CsaV3_7G033010 Cucumis sativus L. HOM05D004831 ORTHO05D003975 9.0e-118 428.7 762 40.4
TWI18G0228 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 7.6e-117 425.6 735 40.5
MELO3C023366.2 Cucumis melo HOM05D004831 ORTHO05D003975 1.9e-115 421.0 762 39.5
FAN02G3038 Fragaria x ananassa HOM05D004831 ORTHO05D003975 3.5e-114 416.8 635 45.4
Ciclev10024870m.g Citrus clementina HOM05D004831 ORTHO05D003975 6.0e-114 416.0 870 37.1
TWI12G0693 Tripterygium wilfordii HOM05D004831 ORTHO05D003975 6.2e-111 406.0 738 39.8
Potri.003G056600 Populus trichocarpa HOM05D004831 ORTHO05D003975 6.9e-110 402.5 768 39.1
Manes.11G052100 Manihot esculenta HOM05D004831 ORTHO05D003975 3.4e-109 400.2 761 39.0
TAR374G0326 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.6e-109 399.1 758 38.0
TAR626G1756 Trochodendron aralioides HOM05D004831 ORTHO05D003975 7.6e-109 399.1 758 38.0
TAR383G0472 Trochodendron aralioides HOM05D004831 ORTHO05D003975 9.3e-107 392.1 784 36.9
Actinidia01793 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.6e-106 391.3 844 36.4
CSS0014524 Camellia sinensis var. sinensis HOM05D004831 ORTHO05D003975 6.9e-102 375.9 849 36.5
Gorai.011G078100 Gossypium raimondii HOM05D004831 ORTHO05D003975 2.0e-101 374.4 759 39.0
Thecc.06G083000 Theobroma cacao HOM05D004831 ORTHO05D003975 3.8e-100 370.2 754 40.2
Sed0027172 Sechium edule HOM05D004831 ORTHO05D003975 6.4e-100 369.4 750 36.4
Gohir.D10G072500 Gossypium hirsutum HOM05D004831 ORTHO05D003975 4.2e-99 366.7 745 38.8
Cpa.g.sc10.161 Carica papaya HOM05D004831 ORTHO05D003975 1.0e-97 362.1 898 34.6
Gohir.A10G079000 Gossypium hirsutum HOM05D004831 ORTHO05D003975 1.5e-96 358.2 750 37.9
Lj5A62T33 Lonicera japonica HOM05D004831 ORTHO05D003975 7.4e-96 355.9 798 36.7
Sabra03G0032100 Salix brachista HOM05D004831 ORTHO05D003975 1.3e-95 355.1 806 36.8
Rhsim08G0218700 Rhododendron simsii HOM05D004831 ORTHO05D003975 3.1e-94 350.5 753 37.6
Glyma.15G013200 Glycine max HOM05D004831 ORTHO05D003975 4.5e-93 346.7 801 34.3
CiPaw.02G152200 Carya illinoinensis HOM05D004831 ORTHO05D003975 7.6e-93 345.9 376 52.1
Glyma.13G360700 Glycine max HOM05D004831 ORTHO05D003975 2.9e-92 344.0 834 34.4
Hma1.2p1_2171F.1_g315970 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 5.5e-91 339.7 743 37.7
Hma1.2p1_0682F.1_g202670 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 9.3e-91 339.0 638 40.4
Lalb_Chr24g0395761 Lupinus albus HOM05D004831 ORTHO05D003975 2.1e-90 337.8 759 35.2
Potri.001G178200 Populus trichocarpa HOM05D004831 ORTHO05D003975 2.7e-90 337.4 762 36.4
vmacro18933 Vaccinium macrocarpon HOM05D004831 ORTHO05D003975 3.0e-89 334.0 691 38.6
Duzib235G0180 Durio zibethinus HOM05D004831 ORTHO05D003975 1.9e-88 331.3 714 38.1
Gohir.A09G084100 Gossypium hirsutum HOM05D004831 ORTHO05D003975 5.7e-88 329.7 670 39.1
Ca_24215_v3 Cicer arietinum L. HOM05D004831 ORTHO05D003975 9.7e-88 328.9 743 35.1
Lj3g0022365 Lotus japonicus HOM05D004831 ORTHO05D003975 1.6e-87 328.2 744 34.9
Gohir.D09G083900 Gossypium hirsutum HOM05D004831 ORTHO05D003975 2.2e-87 327.8 677 39.0
Gorai.006G099900 Gossypium raimondii HOM05D004831 ORTHO05D003975 1.5e-85 321.6 678 39.1
Nn8g39278 Nelumbo nucifera HOM05D004831 ORTHO05D003975 5.9e-85 319.7 766 34.2
Solyc03g120340.3 Solanum lycopersicum HOM05D004831 ORTHO05D003975 1.7e-84 318.2 745 35.0
Sopen03g039230 Solanum pennellii HOM05D004831 ORTHO05D003975 3.8e-84 317.0 751 35.3
CAN.G438.52 Capsicum annuum HOM05D004831 ORTHO05D003975 3.2e-83 313.9 751 35.3
Medtr8g467560 Medicago truncatula HOM05D004831 ORTHO05D003975 9.4e-83 312.4 739 34.4
Eucgr.F03008 Eucalyptus grandis HOM05D004831 ORTHO05D003975 2.7e-82 310.8 739 35.5
PGSC0003DMG400002560 Solanum tuberosum HOM05D004831 ORTHO05D003975 1.0e-81 308.9 779 34.1
Haze_16453 Corylus avellana HOM05D004831 ORTHO05D003975 4.8e-79 300.1 609 38.6
Duzib160G0042 Durio zibethinus HOM05D004831 ORTHO05D003975 1.4e-78 298.5 666 37.8
Hma1.2p1_0323F.1_g125270 Hydrangea macrophylla HOM05D004831 ORTHO05D003975 2.6e-77 294.3 706 36.1
Actinidia15826 Actinidia chinensis HOM05D004831 ORTHO05D003975 3.4e-77 293.9 464 41.8
TPR.G31352 Trifolium pratense HOM05D004831 ORTHO05D003975 1.7e-76 291.6 839 31.2
Peaxi162Scf00015g00247 Petunia axillaris HOM05D004831 ORTHO05D003975 5.0e-76 290.0 780 33.6
MBI01_g10032_MAGBIO Magnolia biondii HOM05D004831 ORTHO05D003975 1.4e-75 288.5 726 34.0
arahy.Tifrunner.gnm1.ann1.5CE7DY Arachis hypogaea HOM05D004831 ORTHO05D003975 2.5e-75 287.7 753 33.3
Aa31LG7G15290 Aethionema arabicum HOM05D004831 ORTHO05D003975 1.6e-74 285.0 747 35.5
Sc15g0001240 Simmondsia chinensis HOM05D004831 ORTHO05D003975 2.1e-74 284.6 844 32.1
PGR102G0340 Punica granatum HOM05D004831 ORTHO05D003975 2.3e-73 281.2 952 30.3
Phvul.005G172500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 3.0e-73 280.8 924 30.7
Nitab4.5_0003159g0050 Nicotiana tabacum HOM05D004831 ORTHO05D003975 3.3e-72 277.3 813 33.2
Aa31sc115G30 Aethionema arabicum HOM05D004831 ORTHO05D003975 4.4e-72 276.9 757 34.2
Lsat_1_v5_gn_1_34820 Lactuca sativa HOM05D004831 ORTHO05D003975 1.1e-70 272.3 742 31.9
Hund06602 Selenicereus undatus HOM05D004831 ORTHO05D003975 1.8e-70 271.6 772 32.6
Oeu021950.1 Olea europaea HOM05D004831 ORTHO05D003975 3.1e-70 270.8 793 31.1
Phvul.002G299500 Phaseolus vulgaris HOM05D004831 ORTHO05D003975 1.2e-69 268.9 743 32.4
Nitab4.5_0003885g0040 Nicotiana tabacum HOM05D004831 ORTHO05D003975 2.6e-69 267.7 801 33.3
Cc04_g03580 Coffea canephora HOM05D004831 ORTHO05D003975 1.7e-68 265.0 738 32.2
COL.COLO4_30332 Corchorus olitorius HOM05D004831 ORTHO05D003975 2.2e-68 264.6 374 47.9
Medtr6g068960 Medicago truncatula HOM05D004831 ORTHO05D003975 3.8e-68 263.8 643 33.4
Sed0009949 Sechium edule HOM05D004831 ORTHO05D003975 9.4e-67 259.2 587 35.4
EL10Ac9g21986 Beta vulgaris HOM05D004831 ORTHO05D003975 1.8e-65 255.0 759 31.2
HanXRQChr05g0163461 Helianthus annuus HOM05D004831 ORTHO05D003975 8.8e-65 252.7 741 30.5
CARHR016160 Cardamine hirsuta HOM05D004831 ORTHO05D003975 1.1e-64 252.3 757 33.0
Lalb_Chr15g0078831 Lupinus albus HOM05D004831 ORTHO05D003975 1.1e-64 252.3 694 33.0
arahy.Tifrunner.gnm1.ann1.3B4S3M Arachis hypogaea HOM05D004831 ORTHO05D003975 2.0e-64 251.5 715 32.0
SGA_v2.0_scaffold37G14809 Striga asiatica HOM05D004831 ORTHO05D003975 3.3e-64 250.8 783 32.2
HanXRQChr02g0032681 Helianthus annuus HOM05D004831 ORTHO05D003975 5.7e-64 250.0 738 30.8
Oeu024063.2 Olea europaea HOM05D004831 ORTHO05D003975 1.8e-62 245.0 701 31.7
arahy.Tifrunner.gnm1.ann1.Y8U4CK Arachis hypogaea HOM05D004831 ORTHO05D003975 5.3e-62 243.4 666 32.7
arahy.Tifrunner.gnm1.ann1.NQW8T9 Arachis hypogaea HOM05D004831 ORTHO05D003975 2.6e-61 241.1 934 29.2
MSTRG.22702 Avicennia marina HOM05D004831 ORTHO05D003975 5.0e-60 236.9 754 31.2
THA.LOC104812471 Tarenaya hassleriana HOM05D004831 ORTHO05D003975 1.2e-58 232.3 783 32.6
Migut.I00846 Erythranthe guttata HOM05D004831 ORTHO05D003975 1.6e-58 231.9 418 37.8
AUR62011616 Chenopodium quinoa HOM05D004831 ORTHO05D003975 5.2e-57 226.9 755 31.8
AT1G15660 Arabidopsis thaliana HOM05D004831 ORTHO05D003975 4.4e-56 223.8 761 31.5
Sp1g13970 Schrenkiella parvula HOM05D004831 ORTHO05D003975 1.3e-55 222.2 770 31.4
Manes.04G121450 Manihot esculenta HOM05D004831 ORTHO05D003975 1.7e-55 221.9 533 34.3
AUR62016432 Chenopodium quinoa HOM05D004831 ORTHO05D003975 4.8e-55 220.3 746 30.7
PSO782G5420 Papaver somniferum HOM05D004831 ORTHO05D003975 1.4e-54 218.8 945 28.4
PSO063G2677 Papaver somniferum HOM05D004831 ORTHO05D003975 2.9e-52 211.1 963 27.3
Aqoxy7G01849 Aquilegia oxysepala HOM05D004831 ORTHO05D003975 3.8e-52 210.7 754 29.0
AL1G27760 Arabidopsis lyrata HOM05D004831 ORTHO05D003975 8.0e-50 203.0 774 30.6
Carub.0001s1544 Capsella rubella HOM05D004831 ORTHO05D003975 8.0e-50 203.0 766 30.3
DCAR_026304 Daucus carota HOM05D004831 ORTHO05D003975 2.3e-49 201.4 687 30.1
A06p11680 Brassica napus HOM05D004831 ORTHO05D003975 3.0e-49 201.1 758 30.1
Ah.01g021180 Amaranthus hybridus HOM05D004831 ORTHO05D003975 4.0e-49 200.7 749 29.9
BraA06t24347Z Brassica rapa HOM05D004831 ORTHO05D003975 8.8e-49 199.5 759 29.4
CDE04G1285 Ceratophyllum demersum HOM05D004831 ORTHO05D003975 5.7e-48 196.8 821 28.0
BcaC05g25641 Brassica carinata HOM05D004831 ORTHO05D003975 7.5e-48 196.4 754 29.4
Psat4g139520 Pisum sativum HOM05D004831 ORTHO05D003975 1.7e-47 195.3 552 30.4
Thhalv10006918m.g Eutrema salsugineum HOM05D004831 ORTHO05D003975 9.1e-46 189.5 781 30.0
BolC5t30118H Brassica oleracea HOM05D004831 ORTHO05D003975 3.5e-45 187.6 746 28.8
BcaC05g25510 Brassica carinata HOM05D004831 ORTHO05D003975 3.8e-44 184.1 768 29.3
Aa31LG7G300 Aethionema arabicum HOM05D004831 ORTHO05D003975 6.8e-41 173.3 629 32.4
C05p13810 Brassica napus HOM05D004831 ORTHO05D012057 1.7e-39 168.7 659 28.8
Lsat_1_v5_gn_9_45780 Lactuca sativa HOM05D004831 ORTHO05D003975 2.2e-39 168.3 670 27.6
ECA247G1173 Erigeron canadensis HOM05D004831 ORTHO05D003975 2.8e-39 167.9 758 27.3
Haze_24989 Corylus avellana HOM05D004831 ORTHO05D003975 8.3e-39 166.4 407 33.9
MD09G1215000 Malus domestica HOM05D004831 ORTHO05D003975 1.4e-38 165.6 143 61.5
ClCG05G013830 Citrullus lanatus HOM05D004831 ORTHO05D003975 3.2e-38 164.5 410 35.4
unitig_62.g23772 Utricularia gibba HOM05D004831 ORTHO05D003975 3.5e-37 161.0 790 28.5
Actinidia15827 Actinidia chinensis HOM05D004831 ORTHO05D003975 1.3e-36 159.1 348 37.6
Duzib192G1036 Durio zibethinus HOM05D004831 ORTHO05D003975 4.3e-35 154.1 461 32.5
ATR0037G028 Amborella trichopoda HOM05D004831 ORTHO05D003975 9.5e-35 152.9 752 25.9
DCAR_009558 Daucus carota HOM05D004831 ORTHO05D003975 3.4e-32 144.4 598 27.8
TAR624G1194 Trochodendron aralioides HOM05D004831 ORTHO05D003975 4.3e-27 127.5 197 44.7
COL.COLO4_30333 Corchorus olitorius HOM05D004831 ORTHO05D003975 4.0e-25 120.9 102 63.7
HPP92_017895 Vanilla planifolia HOM05D004831 ORTHO05D003975 1.9e-22 112.1 776 25.5
Zm00001eb358290 Zea mays HOM05D018572 ORTHO05D003975 1.9e-22 112.1 714 27.0
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 3.2e-22 111.3 124 50.0
Zm00001eb159780 Zea mays HOM05D018572 ORTHO05D003975 1.7e-20 105.5 687 24.6
TPR.G24077 Trifolium pratense HOM05D004831 ORTHO05D003975 1.1e-19 102.8 132 49.2
Os01g0617700 Oryza sativa ssp. japonica HOM05D004831 ORTHO05D003975 9.5e-19 99.8 185 33.5
Haze_16456 Corylus avellana HOM05D004831 ORTHO05D003975 8.1e-18 96.7 116 49.1
Migut.I00847 Erythranthe guttata HOM05D004831 ORTHO05D003975 1.2e-16 92.8 115 48.7
SHI09312 Sapria himalayana HOM05D004831 ORTHO05D003975 5.8e-16 90.5 194 31.4
SMO203G0255 Selaginella moellendorffii HOM05D004831 ORTHO05D003975 1.3e-15 89.4 83 48.2
Pp3c2_32580 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.7e-15 89.0 102 46.1
BcaB03g14531 Brassica carinata HOM05D004831 ORTHO05D017393 4.9e-15 87.4 233 31.8
Mapoly0008s0161 Marchantia polymorpha HOM05D004831 ORTHO05D003975 8.3e-15 86.7 105 47.6
AagrBONN_evm.TU.Sc2ySwM_368.483__484 Anthoceros agrestis HOM05D004831 ORTHO05D003975 5.4e-14 84.0 262 30.5
SEGI_34595 Sequoiadendron giganteum HOM05D004831 ORTHO05D003975 2.7e-13 81.6 52 69.2
Aa31LG7G290 Aethionema arabicum HOM05D004831 ORTHO05D003975 3.0e-12 78.2 146 34.9
RcHm_v2.0_Chr2g0137471 Rosa chinensis HOM05D013195 ORTHO05D020618 4.9e-07 60.8 81 50.6
Pp3c5_11060 Physcomitrium patens HOM05D004831 ORTHO05D003975 1.1e-06 59.7 175 29.7
SEGI_32006 Sequoiadendron giganteum HOM05D004831 ORTHO05D015318 9.3e-06 56.6 55 50.9


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