Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G072600 Prunus persica HOM05D005672 ORTHO05D003038 1.4e-89 332.8 154 100.0
Prupe.6G180200 Prunus persica HOM05D005672 ORTHO05D003038 5.8e-35 151.4 69 97.1
Prupe.3G072700 Prunus persica HOM05D005672 ORTHO05D003038 1.7e-34 149.8 69 97.1
Thecc.06G084400 Theobroma cacao HOM05D005672 ORTHO05D003038 1.3e-18 97.1 101 44.6
Duzib192G0432 Durio zibethinus HOM05D005672 ORTHO05D003038 4.9e-18 95.1 104 39.4
Duzib192G0711 Durio zibethinus HOM05D005672 ORTHO05D003038 4.9e-18 95.1 104 39.4
Duzib192G0507 Durio zibethinus HOM05D005672 ORTHO05D003038 6.4e-18 94.7 104 39.4
MD17G1196900 Malus domestica HOM05D005672 ORTHO05D003038 1.9e-17 93.2 103 44.7
Prupe.3G073800 Prunus persica HOM05D005672 ORTHO05D003038 5.4e-17 91.7 102 49.0
Thecc.06G059000 Theobroma cacao HOM05D005672 ORTHO05D003038 4.6e-16 88.6 101 41.6
Actinidia01798 Actinidia chinensis HOM05D005672 ORTHO05D003038 6.0e-16 88.2 97 42.3
Thecc.06G084800 Theobroma cacao HOM05D005672 ORTHO05D003038 6.0e-16 88.2 103 40.8
Prupe.3G072800 Prunus persica HOM05D005672 ORTHO05D003038 7.9e-16 87.8 103 46.6
Actinidia32765 Actinidia chinensis HOM05D005672 ORTHO05D003038 1.0e-15 87.4 97 42.3
Duzib160G0695 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-15 86.7 105 41.0
Duzib192G0747 Durio zibethinus HOM05D005672 ORTHO05D003038 1.7e-15 86.7 87 43.7
Actinidia14259 Actinidia chinensis HOM05D005672 ORTHO05D003038 8.7e-15 84.3 101 41.6
Thecc.06G084700 Theobroma cacao HOM05D005672 ORTHO05D003038 1.1e-14 84.0 104 40.4
ClCG09G002220 Citrullus lanatus HOM05D005672 ORTHO05D003038 2.5e-14 82.8 152 34.9
Manes.04G122300 Manihot esculenta HOM05D005672 ORTHO05D003038 2.5e-14 82.8 104 40.4
Duzib192G0991 Durio zibethinus HOM05D005672 ORTHO05D003038 3.3e-14 82.4 103 37.9
Actinidia02490 Actinidia chinensis HOM05D005672 ORTHO05D003038 4.3e-14 82.0 103 38.8
Eucgr.J03010 Eucalyptus grandis HOM05D005672 ORTHO05D003038 4.3e-14 82.0 100 41.0
Manes.04G122200 Manihot esculenta HOM05D005672 ORTHO05D003038 5.6e-14 81.6 104 40.4
Eucgr.L03103 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.6e-13 80.1 100 41.0
Oeu006796.1 Olea europaea HOM05D005672 ORTHO05D003038 1.6e-13 80.1 103 38.8
Cc04_g03540 Coffea canephora HOM05D005672 ORTHO05D003038 2.1e-13 79.7 100 39.0
Peaxi162Scf00015g00326 Petunia axillaris HOM05D005672 ORTHO05D003038 2.1e-13 79.7 110 37.3
Gorai.006G099200 Gossypium raimondii HOM05D005672 ORTHO05D003038 6.2e-13 78.2 106 42.5
TAR624G0127 Trochodendron aralioides HOM05D005672 ORTHO05D003038 6.2e-13 78.2 96 38.5
Dinv30519 Davidia involucrata HOM05D005672 ORTHO05D003038 8.1e-13 77.8 84 45.2
Gohir.D09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 8.1e-13 77.8 106 42.5
Eucgr.J03009 Eucalyptus grandis HOM05D005672 ORTHO05D003038 1.1e-12 77.4 101 40.6
Ciclev10027568m.g Citrus clementina HOM05D005672 ORTHO05D003038 1.8e-12 76.6 104 40.4
Duzib192G0281 Durio zibethinus HOM05D005672 ORTHO05D003038 5.3e-12 75.1 104 37.5
MD09G1214500 Malus domestica HOM05D005672 ORTHO05D003038 5.3e-12 75.1 109 39.4
Prupe.3G072900 Prunus persica HOM05D005672 ORTHO05D003038 9.0e-12 74.3 108 39.8
FvH4_6g30990 Fragaria vesca HOM05D005672 ORTHO05D003038 3.4e-11 72.4 100 40.0
FAN05G0478 Fragaria x ananassa HOM05D005672 ORTHO05D003038 4.5e-11 72.0 81 43.2
HanXRQChr10g0314951 Helianthus annuus HOM05D005672 ORTHO05D003038 7.6e-11 71.2 105 36.2
Manes.04G122100 Manihot esculenta HOM05D005672 ORTHO05D003038 7.6e-11 71.2 105 40.0
QL05p025003 Quercus lobata HOM05D005672 ORTHO05D003038 9.9e-11 70.9 82 40.2
Migut.I00857 Erythranthe guttata HOM05D005672 ORTHO05D003038 1.3e-10 70.5 103 35.9
SalBow2G2205 Salvia bowleyana HOM05D005672 ORTHO05D003038 1.3e-10 70.5 97 34.0
Atru.chr1.3244 Acer truncatum HOM05D005672 ORTHO05D003038 1.7e-10 70.1 83 41.0
Ciclev10027058m.g Citrus clementina HOM05D005672 ORTHO05D003038 2.2e-10 69.7 76 47.4
SGA_v2.0_scaffold5G02600 Striga asiatica HOM05D005672 ORTHO05D003038 2.9e-10 69.3 80 37.5
Manes.04G122400 Manihot esculenta HOM05D005672 ORTHO05D003038 8.4e-10 67.8 104 35.6
DCAR_016224 Daucus carota HOM05D005672 ORTHO05D003038 2.4e-09 66.2 112 33.0
Dinv30521 Davidia involucrata HOM05D005672 ORTHO05D003038 3.2e-09 65.9 98 36.7
ECA234G3627 Erigeron canadensis HOM05D005672 ORTHO05D003038 4.2e-09 65.5 90 40.0
Gohir.A09G083700 Gossypium hirsutum HOM05D005672 ORTHO05D003038 4.2e-09 65.5 83 38.6
MSTRG.22696 Avicennia marina HOM05D005672 ORTHO05D003038 5.5e-09 65.1 116 31.9
MD09G1214600 Malus domestica HOM05D005672 ORTHO05D003038 5.5e-09 65.1 103 39.8
Nn8g39244 Nelumbo nucifera HOM05D005672 ORTHO05D003038 7.1e-09 64.7 98 35.7
Sed0001381 Sechium edule HOM05D005672 ORTHO05D003038 7.1e-09 64.7 104 34.6
Nn8g39245 Nelumbo nucifera HOM05D005672 ORTHO05D003038 2.1e-08 63.2 104 34.6
Gohir.A09G083600 Gossypium hirsutum HOM05D005672 ORTHO05D003038 2.7e-08 62.8 108 30.6
Gorai.006G099100 Gossypium raimondii HOM05D005672 ORTHO05D003038 3.5e-08 62.4 108 30.6
HanXRQChr14g0455911 Helianthus annuus HOM05D005672 ORTHO05D003038 4.6e-08 62.0 90 35.6
Gohir.D09G083500 Gossypium hirsutum HOM05D005672 ORTHO05D003038 1.0e-07 60.8 108 29.6
Atru.chr1.3245 Acer truncatum HOM05D005672 ORTHO05D003038 3.0e-07 59.3 89 31.5
vmacro18924 Vaccinium macrocarpon HOM05D005672 ORTHO05D003038 3.0e-07 59.3 80 42.5
ECA232G2097 Erigeron canadensis HOM05D005672 ORTHO05D003038 3.9e-07 58.9 68 47.1
Ciclev10027444m.g Citrus clementina HOM05D005672 ORTHO05D003038 5.1e-07 58.5 102 37.3
PSO339G1026 Papaver somniferum HOM05D007482 ORTHO05D003038 5.1e-07 58.5 89 33.7
Prupe.3G073000 Prunus persica HOM05D005672 ORTHO05D003038 5.1e-07 58.5 89 36.0
Prupe.3G073200 Prunus persica HOM05D005672 ORTHO05D003038 5.1e-07 58.5 84 39.3
Sopen06g025030 Solanum pennellii HOM05D005672 ORTHO05D003038 8.7e-07 57.8 84 39.3
Hund25654 Selenicereus undatus HOM05D005672 ORTHO05D003038 1.1e-06 57.4 68 42.6
Duzib192G0249 Durio zibethinus HOM05D005672 ORTHO05D003038 1.5e-06 57.0 74 39.2
Solyc06g066750.3 Solanum lycopersicum HOM05D005672 ORTHO05D003038 1.5e-06 57.0 84 39.3
PGSC0003DMG400016538 Solanum tuberosum HOM05D005672 ORTHO05D003038 1.5e-06 57.0 84 39.3
THA.LOC104823572 Tarenaya hassleriana HOM05D007482 ORTHO05D003038 2.5e-06 56.2 103 33.0
PSO339G4707 Papaver somniferum HOM05D007482 ORTHO05D003038 3.3e-06 55.8 89 33.7
Thecc.06G054500 Theobroma cacao HOM05D005672 ORTHO05D003038 3.3e-06 55.8 67 35.8
PSO630G0001 Papaver somniferum HOM05D007482 ORTHO05D003038 5.6e-06 55.1 73 37.0
PSO648G0129 Papaver somniferum HOM05D007482 ORTHO05D003038 5.6e-06 55.1 73 37.0
PGR031G0360 Punica granatum HOM05D005672 ORTHO05D003038 5.6e-06 55.1 107 32.7
PGR031G3744 Punica granatum HOM05D005672 ORTHO05D003038 5.6e-06 55.1 107 32.7
ClCG09G002270 Citrullus lanatus HOM05D005672 ORTHO05D003038 7.4e-06 54.7 75 38.7
DCAR_026309 Daucus carota HOM05D005672 ORTHO05D003038 7.4e-06 54.7 101 32.7


User provided reference genes

Program Settings