Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G070300 Prunus persica HOM05D006908 ORTHO05D008662 1.1e-187 659.8 328 100.0
MD17G1194300 Malus domestica HOM05D006908 ORTHO05D008662 2.9e-145 518.8 345 76.8
RcHm_v2.0_Chr2g0138011 Rosa chinensis HOM05D006908 ORTHO05D008662 5.0e-129 464.9 356 69.7
Haze_16403 Corylus avellana HOM05D006908 ORTHO05D008662 1.1e-118 430.6 338 66.0
FAN09G3067 Fragaria x ananassa HOM05D006908 ORTHO05D008662 3.1e-118 429.1 333 67.0
FAN05G1986 Fragaria x ananassa HOM05D006908 ORTHO05D008662 1.2e-117 427.2 332 66.9
QL05p023344 Quercus lobata HOM05D006908 ORTHO05D008662 1.7e-116 423.3 328 67.1
FvH4_6g31280 Fragaria vesca HOM05D006908 ORTHO05D008662 2.2e-116 422.9 327 67.6
Dinv38042 Davidia involucrata HOM05D006908 ORTHO05D008662 3.7e-116 422.2 331 64.7
Atru.chr1.3281 Acer truncatum HOM05D006908 ORTHO05D008662 6.4e-116 421.4 332 63.6
CiPaw.01G238600 Carya illinoinensis HOM05D006908 ORTHO05D008662 3.9e-113 412.1 325 66.2
COL.COLO4_30388 Corchorus olitorius HOM05D006908 ORTHO05D008662 1.9e-112 409.8 330 63.3
Gorai.006G098400 Gossypium raimondii HOM05D006908 ORTHO05D008662 7.3e-112 407.9 338 60.4
GSVIVG01017098001 Vitis vinifera HOM05D006908 ORTHO05D008662 2.1e-111 406.4 332 63.6
Hma1.2p1_0323F.1_g125120 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 1.8e-110 403.3 339 61.1
Thecc.06G089400 Theobroma cacao HOM05D006908 ORTHO05D008662 3.1e-110 402.5 333 61.9
Duzib160G0703 Durio zibethinus HOM05D006908 ORTHO05D008662 6.8e-110 401.4 337 62.3
Actinidia01807 Actinidia chinensis HOM05D006908 ORTHO05D008662 1.3e-108 397.1 327 62.1
Sabra01G0145800 Salix brachista HOM05D006908 ORTHO05D008662 8.4e-108 394.4 331 61.3
Lj5C59T9 Lonicera japonica HOM05D006908 ORTHO05D008662 1.1e-107 394.0 327 61.5
Lj3g0017668 Lotus japonicus HOM05D006908 ORTHO05D008662 1.7e-105 386.7 332 60.8
TAR626G0624 Trochodendron aralioides HOM05D006908 ORTHO05D008662 1.7e-105 386.7 346 61.0
Nn8g39204 Nelumbo nucifera HOM05D006908 ORTHO05D008662 1.1e-104 384.0 324 63.3
Rhsim08G0222000 Rhododendron simsii HOM05D006908 ORTHO05D008662 4.3e-104 382.1 351 58.1
DCAR_023055 Daucus carota HOM05D006908 ORTHO05D008662 4.7e-103 378.6 332 60.8
CANSAT56G3342 Cannabis sativa HOM05D006908 ORTHO05D008662 1.4e-102 377.1 326 59.5
Ciclev10025928m.g Citrus clementina HOM05D006908 ORTHO05D008662 6.8e-102 374.8 363 54.3
Sc10g0007370 Simmondsia chinensis HOM05D006908 ORTHO05D008662 1.5e-101 373.6 337 57.9
ClCG07G013040 Citrullus lanatus HOM05D006908 ORTHO05D008662 7.6e-101 371.3 333 59.5
Eucgr.J02986 Eucalyptus grandis HOM05D006908 ORTHO05D008662 7.6e-101 371.3 320 60.0
Medtr2g102040 Medicago truncatula HOM05D006908 ORTHO05D008662 9.9e-101 370.9 325 60.0
Gohir.D09G082700 Gossypium hirsutum HOM05D006908 ORTHO05D008662 1.7e-100 370.2 338 56.8
Lalb_Chr22g0351301 Lupinus albus HOM05D006908 ORTHO05D008662 2.9e-100 369.4 328 58.8
TPR.G37174 Trifolium pratense HOM05D006908 ORTHO05D008662 2.9e-100 369.4 324 59.9
Phvul.005G170700 Phaseolus vulgaris HOM05D006908 ORTHO05D008662 6.4e-100 368.2 344 57.8
PSO782G4818 Papaver somniferum HOM05D006908 ORTHO05D008662 1.1e-99 367.5 328 60.1
PGR102G2040 Punica granatum HOM05D006908 ORTHO05D008662 1.1e-99 367.5 323 58.2
EL10Ac9g22006 Beta vulgaris HOM05D006908 ORTHO05D008662 4.2e-99 365.5 327 59.3
vmacro18903 Vaccinium macrocarpon HOM05D006908 ORTHO05D008662 4.2e-99 365.5 388 52.3
Ca_01120_v3 Cicer arietinum L. HOM05D006908 ORTHO05D008662 5.4e-99 365.2 323 59.4
Sed0021689 Sechium edule HOM05D006908 ORTHO05D008662 9.3e-99 364.4 334 58.1
CsaV3_3G025130 Cucumis sativus L. HOM05D006908 ORTHO05D008662 2.7e-98 362.8 329 58.7
Glyma.15G014900 Glycine max HOM05D006908 ORTHO05D008662 2.7e-98 362.8 330 59.7
VMungo1080G1808 Vigna mungo HOM05D006908 ORTHO05D008662 3.5e-98 362.5 327 59.0
MELO3C012958.2 Cucumis melo HOM05D006908 ORTHO05D008662 1.3e-97 360.5 333 58.3
PGSC0003DMG400005687 Solanum tuberosum HOM05D006908 ORTHO05D008662 1.7e-97 360.1 329 59.3
Cc04_g03340 Coffea canephora HOM05D006908 ORTHO05D008662 6.6e-97 358.2 336 58.0
PSO063G2605 Papaver somniferum HOM05D006908 ORTHO05D008662 4.3e-96 355.5 328 58.5
Sopen03g039000 Solanum pennellii HOM05D006908 ORTHO05D008662 9.6e-96 354.4 328 58.2
Nitab4.5_0002308g0060 Nicotiana tabacum HOM05D006908 ORTHO05D008662 8.1e-95 351.3 323 57.9
CAN.G438.72 Capsicum annuum HOM05D006908 ORTHO05D008662 1.4e-94 350.5 322 58.4
Gohir.A09G082800 Gossypium hirsutum HOM05D006908 ORTHO05D008662 1.8e-94 350.1 343 54.2
arahy.Tifrunner.gnm1.ann1.0IDI1A Arachis hypogaea HOM05D006908 ORTHO05D008662 5.3e-94 348.6 321 57.6
arahy.Tifrunner.gnm1.ann1.UK934I Arachis hypogaea HOM05D006908 ORTHO05D008662 5.3e-94 348.6 321 57.6
CSS0010187 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 5.3e-94 348.6 288 62.8
Manes.11G045900 Manihot esculenta HOM05D006908 ORTHO05D008662 5.3e-94 348.6 327 58.7
ECA247G1365 Erigeron canadensis HOM05D006908 ORTHO05D008662 9.0e-94 347.8 342 55.8
SalBow2G2262 Salvia bowleyana HOM05D006908 ORTHO05D008662 2.6e-93 346.3 326 55.8
MSTRG.11073 Avicennia marina HOM05D006908 ORTHO05D008662 5.8e-93 345.1 340 54.7
HanXRQChr02g0032801 Helianthus annuus HOM05D006908 ORTHO05D008662 7.6e-93 344.7 328 55.5
Oeu063957.2 Olea europaea HOM05D006908 ORTHO05D008662 3.2e-91 339.3 314 57.6
Ah.01g005440 Amaranthus hybridus HOM05D006908 ORTHO05D008662 2.1e-90 336.7 323 55.1
Migut.I00872 Erythranthe guttata HOM05D006908 ORTHO05D008662 2.1e-90 336.7 332 51.8
AUR62042927 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.0e-89 334.3 351 53.3
Aqoxy7G01689 Aquilegia oxysepala HOM05D006908 ORTHO05D008662 5.1e-89 332.0 330 55.2
Hund06614 Selenicereus undatus HOM05D006908 ORTHO05D008662 1.1e-88 330.9 328 54.6
Potri.001G181200 Populus trichocarpa HOM05D006908 ORTHO05D008662 1.3e-87 327.4 276 61.2
Solyc03g120130.4 Solanum lycopersicum HOM05D006908 ORTHO05D008662 1.2e-85 320.9 323 54.8
HPP92_003725 Vanilla planifolia HOM05D006908 ORTHO05D008662 2.0e-85 320.1 326 50.6
Hma1.2p1_0323F.1_g125130 Hydrangea macrophylla HOM05D006908 ORTHO05D008662 9.9e-85 317.8 322 54.0
Sp5g35850 Schrenkiella parvula HOM05D006908 ORTHO05D008662 9.9e-85 317.8 326 51.5
THA.LOC104812520 Tarenaya hassleriana HOM05D006908 ORTHO05D008662 2.4e-83 313.2 343 50.7
Cfa002075 Carpinus fangiana HOM05D006908 ORTHO05D008662 3.2e-83 312.8 247 66.4
TWI75G1463 Tripterygium wilfordii HOM05D006908 ORTHO05D008662 1.2e-82 310.8 328 51.5
Psat5g298720 Pisum sativum HOM05D006908 ORTHO05D008662 7.9e-82 308.1 305 54.4
CARHR074570 Cardamine hirsuta HOM05D006908 ORTHO05D008662 3.9e-81 305.8 327 50.8
Os06g0639300 Oryza sativa ssp. japonica HOM05D006908 ORTHO05D008662 3.9e-81 305.8 334 50.9
CDE02G0011 Ceratophyllum demersum HOM05D006908 ORTHO05D008662 5.1e-81 305.4 326 51.5
unitig_52.g17450 Utricularia gibba HOM05D006908 ORTHO05D008662 8.7e-81 304.7 333 49.8
Thhalv10018901m.g Eutrema salsugineum HOM05D006908 ORTHO05D008662 2.5e-80 303.1 330 50.3
Nitab4.5_0000671g0150 Nicotiana tabacum HOM05D006908 ORTHO05D008662 2.5e-80 303.1 331 51.4
Aa31LG4G230 Aethionema arabicum HOM05D006908 ORTHO05D008662 1.3e-79 300.8 346 48.0
Carub.0002s2758 Capsella rubella HOM05D006908 ORTHO05D008662 2.1e-79 300.1 326 48.8
Zm00001eb275430 Zea mays HOM05D006908 ORTHO05D008662 8.1e-79 298.1 341 48.7
AT1G79915 Arabidopsis thaliana HOM05D006908 ORTHO05D008662 5.3e-78 295.4 326 50.0
Peaxi162Scf00015g00453 Petunia axillaris HOM05D006908 ORTHO05D008662 1.3e-76 290.8 321 51.4
BcaC08g47592 Brassica carinata HOM05D002960 ORTHO05D003632 1.1e-75 287.7 330 47.9
BcaC08g47561 Brassica carinata HOM05D006908 ORTHO05D008662 1.4e-75 287.3 323 49.8
AUR62016450 Chenopodium quinoa HOM05D006908 ORTHO05D008662 1.8e-73 280.4 308 51.6
Cpa.g.sc0.185 Carica papaya HOM05D006908 ORTHO05D008662 1.5e-72 277.3 218 63.8
C06p54330 Brassica napus HOM05D002960 ORTHO05D003632 3.3e-72 276.2 361 44.0
SEGI_13943 Sequoiadendron giganteum HOM05D006908 ORTHO05D008662 3.3e-72 276.2 352 44.6
BraA07t32051Z Brassica rapa HOM05D006908 ORTHO05D008662 1.6e-71 273.9 343 46.4
BolC6t40444H Brassica oleracea HOM05D002960 ORTHO05D003632 2.1e-71 273.5 356 44.4
SHI10939 Sapria himalayana HOM05D006908 ORTHO05D008662 2.6e-69 266.5 253 55.3
MBI15_g13424_MAGBIO Magnolia biondii HOM05D006908 ORTHO05D008662 8.5e-68 261.5 255 55.7
ATR0602G186 Amborella trichopoda HOM05D006908 ORTHO05D008662 3.6e-66 256.1 251 51.4
CSS0029579 Camellia sinensis var. sinensis HOM05D006908 ORTHO05D008662 9.7e-64 248.1 183 67.8
Mapoly0072s0004 Marchantia polymorpha HOM05D006908 ORTHO05D008662 2.2e-63 246.9 341 44.0
FAN02G3381 Fragaria x ananassa HOM05D006908 ORTHO05D008662 2.4e-62 243.4 220 57.7
A07p45490 Brassica napus HOM05D006908 ORTHO05D008662 5.3e-62 242.3 389 40.4
AUR62033073 Chenopodium quinoa HOM05D006908 ORTHO05D008662 5.1e-57 225.7 288 45.8
AagrBONN_evm.TU.Sc2ySwM_344.5185 Anthoceros agrestis HOM05D006908 ORTHO05D008662 6.7e-57 225.3 327 41.9
Pp3c16_8290 Physcomitrium patens HOM05D006908 ORTHO05D008662 4.5e-53 212.6 284 40.5
Lsat_1_v5_gn_1_35121 Lactuca sativa HOM05D006908 ORTHO05D008662 7.7e-53 211.8 218 53.2
CBR_g20274 Chara braunii HOM05D006908 ORTHO05D008662 1.7e-47 194.1 313 37.7
BcaC04g22058 Brassica carinata HOM05D006908 ORTHO05D008662 2.2e-47 193.7 329 38.6
C09p24020 Brassica napus HOM05D006908 ORTHO05D008662 2.2e-36 157.1 225 43.1
SGA_v2.0_scaffold37G14828 Striga asiatica HOM05D006908 ORTHO05D008662 8.3e-31 138.7 131 57.3
Cpa.g.sc41.12 Carica papaya HOM05D006908 ORTHO05D008662 7.2e-27 125.6 85 68.2
SMO347G0515 Selaginella moellendorffii HOM05D006908 ORTHO05D008662 1.7e-23 114.4 207 36.2
BolC9t55322H Brassica oleracea HOM05D006908 ORTHO05D008662 5.4e-22 109.4 91 58.2
AL2G41640 Arabidopsis lyrata HOM05D006908 ORTHO05D008662 9.2e-22 108.6 150 43.3
Actinidia32749 Actinidia chinensis HOM05D006908 ORTHO05D008662 2.3e-17 94.0 233 31.3
FAN14G1268 Fragaria x ananassa HOM05D006908 ORTHO05D008662 4.6e-13 79.7 69 63.8
Cpa.g.sc41.10 Carica papaya HOM05D006908 ORTHO05D008662 1.8e-09 67.8 72 52.8
Cpa.g.sc41.11 Carica papaya HOM05D006908 ORTHO05D008662 4.9e-07 59.7 37 64.9
Cpa.g.c43825 Carica papaya HOM05D006908 ORTHO05D008662 8.3e-07 58.9 34 82.4


User provided reference genes

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