Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 1.3e-32 142.5 74 100.0
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.2e-16 88.6 72 66.7
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.4e-15 85.9 72 65.3
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.3e-13 78.6 74 63.5
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 2.3e-13 78.6 74 64.9
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.9e-13 77.8 74 63.5
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 5.1e-13 77.4 74 63.5
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 5.1e-13 77.4 74 63.5
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 5.1e-13 77.4 74 64.9
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 5.1e-13 77.4 72 63.9
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 6.7e-13 77.0 72 63.9
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 1.9e-12 75.5 74 59.5
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 3.3e-12 74.7 74 62.2
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 3.3e-12 74.7 74 63.5
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 4.3e-12 74.3 72 59.7
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 5.6e-12 73.9 72 61.1
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 5.6e-12 73.9 74 58.1
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 5.6e-12 73.9 74 58.1
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 9.6e-12 73.2 74 60.8
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 9.6e-12 73.2 74 58.1
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 1.3e-11 72.8 73 53.4
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 1.6e-11 72.4 73 58.9
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 2.1e-11 72.0 71 62.0
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.1e-11 72.0 74 56.8
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 4.8e-11 70.9 65 63.1
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 6.2e-11 70.5 72 58.3
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 8.1e-11 70.1 74 58.1
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 1.1e-10 69.7 72 56.9
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 1.4e-10 69.3 74 55.4
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 1.8e-10 68.9 74 52.7
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.1e-10 68.2 72 58.3
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 4.0e-10 67.8 74 52.7
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.0e-10 67.8 71 60.6
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 4.0e-10 67.8 74 52.7
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.0e-10 67.8 72 56.9
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 4.0e-10 67.8 71 57.7
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 5.3e-10 67.4 72 55.6
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 5.3e-10 67.4 74 54.1
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 5.3e-10 67.4 71 54.9
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 5.3e-10 67.4 74 52.7
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 6.9e-10 67.0 65 61.5
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 6.9e-10 67.0 69 56.5
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 9.0e-10 66.6 72 56.9
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 9.0e-10 66.6 74 52.7
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 1.2e-09 66.2 72 51.4
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 1.2e-09 66.2 63 58.7
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.2e-09 66.2 72 56.9
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.2e-09 66.2 74 54.1
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 1.5e-09 65.9 76 51.3
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 1.5e-09 65.9 74 51.4
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 2.0e-09 65.5 69 56.5
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.6e-09 65.1 72 55.6
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 3.4e-09 64.7 74 52.7
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 4.5e-09 64.3 74 55.4
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 4.5e-09 64.3 74 55.4
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 5.8e-09 63.9 65 58.5
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 1.0e-08 63.2 72 54.2
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 1.3e-08 62.8 57 61.4
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 1.7e-08 62.4 68 47.1
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 1.7e-08 62.4 74 52.7
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 1.7e-08 62.4 72 55.6
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 2.9e-08 61.6 74 50.0
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 2.9e-08 61.6 74 47.3
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 3.8e-08 61.2 74 52.7
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 3.8e-08 61.2 65 58.5
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 4.9e-08 60.8 74 50.0
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 4.9e-08 60.8 74 50.0
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 1.1e-07 59.7 71 47.9
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.4e-07 59.3 74 51.4
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 2.5e-07 58.5 70 52.9
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 1.6e-06 55.8 69 52.2
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 1.6e-06 55.8 74 52.7
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 2.1e-06 55.5 58 56.9
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 3.5e-06 54.7 71 46.5
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 6.0e-06 53.9 73 42.5


User provided reference genes

Program Settings