Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 6.6e-57 223.8 111 100.0
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 6.9e-38 160.6 116 77.6
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 7.6e-29 130.6 113 61.1
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 2.9e-28 128.6 113 63.7
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 1.2e-26 123.2 113 55.8
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.6e-26 122.9 113 55.8
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.1e-26 122.5 113 54.9
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.1e-26 122.5 113 55.8
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 1.8e-25 119.4 111 59.5
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 1.8e-25 119.4 114 53.5
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 3.0e-25 118.6 112 53.6
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 9.6e-24 113.6 114 59.6
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 1.6e-23 112.8 111 52.3
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 1.4e-22 109.8 108 57.4
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 2.4e-22 109.0 111 52.3
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 4.0e-22 108.2 114 56.1
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 9.0e-22 107.1 110 54.5
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 1.2e-21 106.7 111 52.3
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 5.8e-21 104.4 113 52.2
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 1.7e-20 102.8 116 49.1
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 3.8e-20 101.7 115 53.0
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 6.5e-20 100.9 120 50.0
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 1.1e-19 100.1 115 52.2
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 1.1e-19 100.1 115 51.3
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 1.9e-19 99.4 113 46.9
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 9.3e-19 97.1 111 48.6
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 1.6e-18 96.3 155 40.0
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 2.1e-18 95.9 120 49.2
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 7.9e-18 94.0 100 54.0
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 1.3e-17 93.2 123 46.3
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 2.3e-17 92.4 100 53.0
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 3.9e-17 91.7 119 49.6
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 1.1e-16 90.1 112 48.2
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 1.1e-16 90.1 113 48.7
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.5e-16 89.7 100 52.0
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 1.9e-16 89.4 110 49.1
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 3.3e-16 88.6 116 48.3
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 3.3e-16 88.6 113 41.6
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 9.7e-16 87.0 110 45.5
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 1.6e-15 86.3 114 45.6
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 3.7e-15 85.1 117 42.7
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 3.7e-15 85.1 112 44.6
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 1.4e-14 83.2 112 43.8
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 3.1e-14 82.0 116 44.0
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 4.1e-14 81.6 112 42.9
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 5.3e-14 81.3 113 47.8
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 9.0e-14 80.5 108 43.5
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 1.2e-13 80.1 117 44.4
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 1.2e-13 80.1 115 43.5
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 2.0e-13 79.3 113 43.4
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 5.9e-13 77.8 114 46.5
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 7.6e-13 77.4 115 43.5
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 7.6e-13 77.4 108 45.4
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 1.3e-12 76.6 111 40.5
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 1.3e-12 76.6 108 45.4
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 1.7e-12 76.3 107 42.1
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 1.7e-12 76.3 113 42.5
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 1.1e-11 73.6 91 49.5
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 1.4e-11 73.2 107 40.2
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 7.2e-11 70.9 82 45.1
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 9.4e-11 70.5 111 40.5
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 9.4e-11 70.5 113 38.9
arahy.Tifrunner.gnm1.ann1.UX9EW1 Arachis hypogaea HOM05D008072 ORTHO05D010204 1.2e-10 70.1 111 41.4
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 1.2e-10 70.1 113 45.1
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 2.7e-10 68.9 110 42.7
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 2.7e-10 68.9 110 41.8
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 3.6e-10 68.6 119 37.0
AUR62031887 Chenopodium quinoa HOM05D008072 ORTHO05D010204 6.1e-10 67.8 112 40.2
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 3.9e-09 65.1 99 38.4
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 6.7e-09 64.3 101 37.6
Oeu063939.2 Olea europaea HOM05D000181 ORTHO05D008575 1.9e-08 62.8 63 49.2
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 1.9e-08 62.8 56 53.6
CiPaw.02G146800 Carya illinoinensis HOM05D008072 ORTHO05D010204 4.3e-08 61.6 105 42.9
MBI04_g06582_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 1.8e-06 56.2 86 45.3


User provided reference genes

Program Settings