Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G049000 Prunus persica HOM05D006504 ORTHO05D007867 3.9e-62 241.9 184 100.0
FvH4_6g33500 Fragaria vesca HOM05D006504 ORTHO05D007867 3.6e-52 208.8 185 85.4
FAN14G5793 Fragaria x ananassa HOM05D006504 ORTHO05D007867 3.6e-52 208.8 185 84.9
RcHm_v2.0_Chr2g0143361 Rosa chinensis HOM05D006504 ORTHO05D007867 3.6e-52 208.8 185 84.9
FAN02G0681 Fragaria x ananassa HOM05D006504 ORTHO05D007867 2.4e-51 206.1 184 77.2
FAN09G0296 Fragaria x ananassa HOM05D006504 ORTHO05D007867 2.4e-51 206.1 184 70.1
MD09G1192700 Malus domestica HOM05D006504 ORTHO05D007867 6.0e-47 191.4 165 91.5
FAN21G2275 Fragaria x ananassa HOM05D006504 ORTHO05D007867 1.0e-46 190.7 184 84.2
Hma1.2p1_0388F.1_g142400 Hydrangea macrophylla HOM05D006504 ORTHO05D007867 1.5e-45 186.8 189 74.6
Duzib235G1492 Durio zibethinus HOM05D006504 ORTHO05D007867 2.5e-45 186.0 180 78.9
GSVIVG01016863001 Vitis vinifera HOM05D006504 ORTHO05D007867 3.3e-45 185.7 184 76.1
Gohir.A05G135200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 4.0e-43 178.7 170 81.8
CSS0018438 Camellia sinensis var. sinensis HOM05D006504 ORTHO05D007867 5.3e-43 178.3 193 76.7
Gorai.009G141600 Gossypium raimondii HOM05D006504 ORTHO05D007867 6.9e-43 177.9 170 81.8
Gohir.D05G137200 Gossypium hirsutum HOM05D006504 ORTHO05D007867 5.8e-42 174.9 170 81.2
Thecc.06G112500 Theobroma cacao HOM05D006504 ORTHO05D007867 1.7e-41 173.3 180 72.2
Manes.04G140200 Manihot esculenta HOM05D006504 ORTHO05D007867 1.4e-40 170.2 191 74.3
Cpa.g.sc25.42 Carica papaya HOM05D006504 ORTHO05D007867 1.9e-40 169.9 170 82.9
Eucgr.F03135 Eucalyptus grandis HOM05D006504 ORTHO05D007867 1.9e-40 169.9 204 63.7
Lsat_1_v5_gn_5_135100 Lactuca sativa HOM05D006504 ORTHO05D007867 1.6e-39 166.8 171 77.2
Potri.003G037200 Populus trichocarpa HOM05D006504 ORTHO05D007867 7.9e-39 164.5 196 73.5
Manes.11G025900 Manihot esculenta HOM05D006504 ORTHO05D007867 2.3e-38 162.9 191 74.3
CiPaw.01G224400 Carya illinoinensis HOM05D006504 ORTHO05D007867 3.0e-38 162.5 97 83.5
Atru.chr1.3757 Acer truncatum HOM05D006504 ORTHO05D007867 5.1e-38 161.8 187 75.9
HanXRQChr12g0360501 Helianthus annuus HOM05D006504 ORTHO05D007867 1.5e-37 160.2 171 76.6
CsaV3_3G043850 Cucumis sativus L. HOM05D006504 ORTHO05D007867 1.9e-37 159.8 98 80.6
Ciclev10026403m.g Citrus clementina HOM05D006504 ORTHO05D007867 2.5e-37 159.5 170 66.5
Nn8g38840 Nelumbo nucifera HOM05D006504 ORTHO05D007867 5.7e-37 158.3 178 57.9
Gorai.011G064600 Gossypium raimondii HOM05D006504 ORTHO05D007867 2.1e-36 156.4 184 60.9
Glyma.07G009300 Glycine max HOM05D006504 ORTHO05D007867 3.7e-36 155.6 98 80.6
Lalb_Chr25g0280741 Lupinus albus HOM05D006504 ORTHO05D007867 3.7e-36 155.6 98 80.6
TWI31G0577 Tripterygium wilfordii HOM05D006504 ORTHO05D007867 4.8e-36 155.2 184 70.1
TAR383G0025 Trochodendron aralioides HOM05D006504 ORTHO05D007867 6.2e-36 154.8 95 81.1
arahy.Tifrunner.gnm1.ann1.2CYW67 Arachis hypogaea HOM05D006504 ORTHO05D007867 1.8e-35 153.3 98 79.6
arahy.Tifrunner.gnm1.ann1.S1QT98 Arachis hypogaea HOM05D006504 ORTHO05D007867 1.8e-35 153.3 98 79.6
Cc05_g02540 Coffea canephora HOM05D006504 ORTHO05D007867 6.9e-35 151.4 96 77.1
Gohir.D10G060350 Gossypium hirsutum HOM05D006504 ORTHO05D007867 1.5e-34 150.2 98 77.6
THA.LOC104822636 Tarenaya hassleriana HOM05D006504 ORTHO05D007867 1.5e-34 150.2 98 75.5
Glyma.08G192500 Glycine max HOM05D006504 ORTHO05D007867 2.0e-34 149.8 97 78.4
Sopen02g018660 Solanum pennellii HOM05D006504 ORTHO05D007867 2.6e-34 149.4 201 66.7
VMungo0331G1418 Vigna mungo HOM05D006504 ORTHO05D007867 2.6e-34 149.4 98 76.5
Aqoxy5G00309 Aquilegia oxysepala HOM05D006504 ORTHO05D007867 4.5e-34 148.7 96 77.1
Lj3g0009120 Lotus japonicus HOM05D006504 ORTHO05D007867 5.8e-34 148.3 98 76.5
Medtr8g017180 Medicago truncatula HOM05D006504 ORTHO05D007867 5.8e-34 148.3 98 76.5
AL1G63070 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 7.6e-34 147.9 98 72.4
MSTRG.22579 Avicennia marina HOM05D006504 ORTHO05D007867 7.6e-34 147.9 182 53.3
Carub.0001s4357 Capsella rubella HOM05D006504 ORTHO05D007867 1.0e-33 147.5 98 72.4
Sp1g40740 Schrenkiella parvula HOM05D006504 ORTHO05D007867 1.0e-33 147.5 98 73.5
Lj5A44T119 Lonicera japonica HOM05D006504 ORTHO05D007867 1.3e-33 147.1 96 76.0
QL05p000757 Quercus lobata HOM05D006504 ORTHO05D007867 1.7e-33 146.7 96 76.0
QL05p000665 Quercus lobata HOM05D006504 ORTHO05D007867 3.8e-33 145.6 96 75.0
Solyc02g069520.2 Solanum lycopersicum HOM05D006504 ORTHO05D007867 3.8e-33 145.6 211 63.5
Psat4g188440 Pisum sativum HOM05D006504 ORTHO05D007867 5.0e-33 145.2 98 74.5
TPR.G37598 Trifolium pratense HOM05D006504 ORTHO05D007867 5.0e-33 145.2 98 75.5
CAN.G675.25 Capsicum annuum HOM05D006504 ORTHO05D007867 3.2e-32 142.5 96 75.0
BcaB04g17003 Brassica carinata HOM05D006504 ORTHO05D007867 4.2e-32 142.1 98 73.5
ECA234G1551 Erigeron canadensis HOM05D000001 ORTHO05D009948 7.2e-32 141.4 96 70.8
PGR102G0591 Punica granatum HOM05D006504 ORTHO05D007867 7.2e-32 141.4 187 62.6
AT1G55080 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 9.3e-32 141.0 96 69.8
Migut.I01030 Erythranthe guttata HOM05D006504 ORTHO05D007867 9.3e-32 141.0 179 62.6
BraA08t32155Z Brassica rapa HOM05D006504 ORTHO05D007867 1.2e-31 140.6 98 72.4
CARHR044670 Cardamine hirsuta HOM05D006504 ORTHO05D007867 1.2e-31 140.6 98 69.4
HPP92_023888 Vanilla planifolia HOM05D006504 ORTHO05D007867 3.5e-31 139.0 96 68.8
BolC3t21536H Brassica oleracea HOM05D006504 ORTHO05D007867 4.6e-31 138.7 98 71.4
COL.COLO4_30670 Corchorus olitorius HOM05D006504 ORTHO05D007867 6.1e-31 138.3 88 78.4
BcaC01g01455 Brassica carinata HOM05D006504 ORTHO05D007867 1.0e-30 137.5 98 70.4
PSO210G6889 Papaver somniferum HOM05D006504 ORTHO05D007867 2.3e-30 136.3 93 72.0
Cfa003580 Carpinus fangiana HOM05D006504 ORTHO05D007867 3.0e-30 136.0 87 80.5
Peaxi162Scf00195g00313 Petunia axillaris HOM05D006504 ORTHO05D007867 3.0e-30 136.0 94 72.3
MELO3C030574.2 Cucumis melo HOM05D006504 ORTHO05D007867 8.7e-30 134.4 84 81.0
PSO210G7829 Papaver somniferum HOM05D006504 ORTHO05D007867 8.7e-30 134.4 93 71.0
arahy.Tifrunner.gnm1.ann1.IBA4C6 Arachis hypogaea HOM05D006504 ORTHO05D007867 7.4e-29 131.3 87 78.2
Os01g0501000 Oryza sativa ssp. japonica HOM05D006504 ORTHO05D007867 7.4e-29 131.3 95 66.3
arahy.Tifrunner.gnm1.ann1.Y1EG1J Arachis hypogaea HOM05D006504 ORTHO05D007867 9.7e-29 131.0 85 77.6
Nn5g26799 Nelumbo nucifera HOM05D006504 ORTHO05D007867 9.7e-29 131.0 160 63.8
Nn8g38837 Nelumbo nucifera HOM05D006504 ORTHO05D007867 1.3e-28 130.6 160 56.2
Sc12g0010270 Simmondsia chinensis HOM05D006504 ORTHO05D007867 1.6e-28 130.2 86 75.6
HPP92_023833 Vanilla planifolia HOM05D006504 ORTHO05D007867 6.3e-28 128.3 91 67.0
CDE04G1380 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 1.4e-27 127.1 96 66.7
BolC6t36770H Brassica oleracea HOM05D006504 ORTHO05D007867 2.4e-27 126.3 98 68.4
Ah.08g216230 Amaranthus hybridus HOM05D006504 ORTHO05D007867 4.1e-27 125.6 90 68.9
ATR0661G108 Amborella trichopoda HOM05D006504 ORTHO05D007867 9.0e-27 124.4 95 65.3
Aa31LG10G870 Aethionema arabicum HOM05D006504 ORTHO05D007867 4.5e-26 122.1 125 53.6
BraA05t20659Z Brassica rapa HOM05D006504 ORTHO05D007867 5.9e-26 121.7 96 67.7
PGSC0003DMG400021202 Solanum tuberosum HOM05D006504 ORTHO05D007867 5.9e-26 121.7 86 69.8
BcaB03g13872 Brassica carinata HOM05D006504 ORTHO05D007867 1.3e-25 120.6 96 63.5
BcaC06g35444 Brassica carinata HOM05D006504 ORTHO05D007867 1.9e-24 116.7 96 59.4
C07p16100 Brassica napus HOM05D006504 ORTHO05D007867 1.9e-24 116.7 96 59.4
BolC7t42095H Brassica oleracea HOM05D006504 ORTHO05D007867 1.9e-24 116.7 96 59.4
A08p01030 Brassica napus HOM05D001264 ORTHO05D007867 5.5e-24 115.2 79 73.4
C03p92210 Brassica napus HOM05D001264 ORTHO05D007867 5.5e-24 115.2 79 73.4
Rhsim12G0206400 Rhododendron simsii HOM05D006504 ORTHO05D007867 5.5e-24 115.2 214 58.9
A07p10460 Brassica napus HOM05D006504 ORTHO05D007867 4.6e-23 112.1 92 57.6
BraA07t28846Z Brassica rapa HOM05D006504 ORTHO05D007867 4.6e-23 112.1 92 57.6
CDE06G0601 Ceratophyllum demersum HOM05D006504 ORTHO05D007867 6.1e-23 111.7 87 65.5
Carub.0001s2784 Capsella rubella HOM05D006504 ORTHO05D007867 1.8e-22 110.2 99 57.6
ClCG07G013760 Citrullus lanatus HOM05D006504 ORTHO05D007867 5.7e-21 105.1 81 70.4
QL05p000679 Quercus lobata HOM05D006504 ORTHO05D007867 1.7e-20 103.6 88 65.9
QL05p000687 Quercus lobata HOM05D006504 ORTHO05D007867 1.7e-20 103.6 88 65.9
A05p17670 Brassica napus HOM05D006504 ORTHO05D007867 3.7e-20 102.4 79 69.6
Gohir.A10G058600 Gossypium hirsutum HOM05D006504 ORTHO05D007867 6.3e-20 101.7 151 51.7
ATR0800G060 Amborella trichopoda HOM05D006504 ORTHO05D007867 8.2e-20 101.3 77 64.9
C06p15780 Brassica napus HOM05D001264 ORTHO05D001167 1.4e-19 100.5 79 68.4
BcaC08g44177 Brassica carinata HOM05D001264 ORTHO05D001167 3.4e-18 95.9 79 67.1
SEGI_28258 Sequoiadendron giganteum HOM05D006504 ORTHO05D007867 3.4e-18 95.9 95 53.7
Mapoly0004s0244 Marchantia polymorpha HOM05D006504 ORTHO05D007867 5.9e-18 95.1 96 51.0
SGA_v2.0_scaffold127G34055 Striga asiatica HOM05D006504 ORTHO05D007867 6.5e-17 91.7 166 56.6
TPR.G19289 Trifolium pratense HOM05D006504 ORTHO05D007867 2.5e-16 89.7 98 52.0
Sp3g12060 Schrenkiella parvula HOM05D006504 ORTHO05D007867 3.2e-16 89.4 79 60.8
Zm00001eb066180 Zea mays HOM05D006504 ORTHO05D007867 1.6e-15 87.0 95 49.5
SMO358G0601 Selaginella moellendorffii HOM05D006504 ORTHO05D007867 2.3e-14 83.2 89 48.3
Haze_15959 Corylus avellana HOM05D006504 ORTHO05D007867 2.6e-13 79.7 48 79.2
AL1G43430 Arabidopsis lyrata HOM05D006504 ORTHO05D007867 3.3e-13 79.3 99 45.5
Thhalv10022201m.g Eutrema salsugineum HOM05D006504 ORTHO05D007867 1.4e-11 73.9 68 60.3
Nitab4.5_0001219g0120 Nicotiana tabacum HOM05D006504 ORTHO05D007867 9.1e-11 71.2 88 48.9
vmacro17023 Vaccinium macrocarpon HOM05D006504 ORTHO05D007867 9.1e-11 71.2 50 64.0
DCAR_007625 Daucus carota HOM05D006504 ORTHO05D007867 1.2e-10 70.9 85 47.1
Phvul.010G138400 Phaseolus vulgaris HOM05D006504 ORTHO05D007867 7.2e-08 61.6 39 79.5
AT1G29580 Arabidopsis thaliana HOM05D006504 ORTHO05D007867 4.7e-07 58.9 98 40.8
SGA_v2.0_scaffold464G52010 Striga asiatica HOM05D006504 ORTHO05D007867 1.0e-06 57.8 44 63.6
MD00G1059800 Malus domestica HOM05D006504 ORTHO05D007867 2.3e-06 56.6 31 83.9
Pp3c21_4920 Physcomitrium patens HOM05D006504 ORTHO05D007867 2.3e-06 56.6 96 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1668 Anthoceros agrestis HOM05D006504 ORTHO05D007867 4.0e-06 55.8 59 44.1


User provided reference genes

Program Settings