Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 3.6e-148 528.5 273 100.0
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 1.3e-92 344.0 273 70.7
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 2.8e-92 342.8 273 69.2
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 6.3e-92 341.7 273 69.6
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 5.4e-91 338.6 273 68.9
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 7.0e-91 338.2 273 68.1
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 1.9e-64 250.4 278 52.2
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 2.0e-61 240.4 283 54.4
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 2.2e-60 236.9 282 52.1
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 2.4e-59 233.4 279 53.0
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 1.1e-56 224.6 273 46.9
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.5e-56 224.2 272 47.8
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 1.9e-56 223.8 280 50.0
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 3.3e-56 223.0 282 46.5
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 5.6e-56 222.2 272 47.4
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 3.6e-55 219.5 273 45.1
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 1.8e-54 217.2 284 47.9
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 1.8e-54 217.2 278 50.4
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 8.9e-54 214.9 274 46.4
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 7.6e-53 211.8 275 47.3
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 2.2e-52 210.3 280 45.4
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 2.2e-52 210.3 281 45.2
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 2.2e-52 210.3 269 45.4
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 2.9e-52 209.9 273 45.4
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 1.9e-51 207.2 282 44.7
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 2.4e-51 206.8 282 46.8
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 9.2e-51 204.9 292 47.6
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 1.2e-50 204.5 295 44.1
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 1.6e-50 204.1 258 46.5
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 2.7e-50 203.4 271 46.1
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 2.3e-49 200.3 273 44.3
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 3.0e-49 199.9 289 43.9
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 8.7e-49 198.4 276 46.4
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 8.7e-49 198.4 305 41.0
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 1.5e-48 197.6 276 45.7
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 1.9e-48 197.2 208 52.9
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 7.3e-48 195.3 271 48.0
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 7.3e-48 195.3 271 48.0
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 9.6e-48 194.9 282 50.0
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 2.8e-47 193.4 254 43.3
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 3.6e-47 193.0 280 43.6
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 6.2e-47 192.2 277 44.0
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 3.1e-46 189.9 280 43.2
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 1.2e-45 188.0 255 42.7
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 4.4e-45 186.0 260 46.5
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 5.8e-45 185.7 277 39.4
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 9.9e-45 184.9 273 44.3
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 2.9e-44 183.3 245 45.7
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 3.8e-44 183.0 278 43.9
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 4.9e-44 182.6 266 44.7
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 6.4e-44 182.2 268 45.1
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 1.4e-43 181.0 252 45.2
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 2.4e-43 180.3 210 44.3
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 5.4e-43 179.1 273 42.9
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 5.4e-43 179.1 202 51.0
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 7.1e-43 178.7 281 39.5
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 7.1e-43 178.7 286 42.7
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.6e-42 177.6 274 40.1
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 2.1e-42 177.2 207 46.9
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.0e-41 174.9 293 41.3
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 2.3e-41 173.7 280 44.6
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 3.0e-41 173.3 273 43.6
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 5.1e-41 172.6 204 46.1
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 5.1e-41 172.6 238 45.8
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.5e-40 171.0 293 42.0
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 1.9e-40 170.6 261 45.2
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 4.3e-40 169.5 312 38.8
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 7.3e-40 168.7 259 42.1
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 9.6e-40 168.3 278 42.1
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.3e-39 167.9 279 42.3
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 2.1e-39 167.2 271 43.9
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 2.1e-39 167.2 271 43.9
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 1.1e-38 164.9 281 38.4
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 1.1e-38 164.9 280 39.6
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.4e-38 164.5 256 42.6
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 1.4e-38 164.5 275 41.5
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 4.0e-38 162.9 197 45.7
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 2.0e-37 160.6 269 41.3
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 7.6e-37 158.7 274 40.9
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 8.4e-36 155.2 274 42.3
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 3.2e-35 153.3 261 42.9
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 1.6e-34 151.0 257 42.8
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 3.0e-33 146.7 164 50.6
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 3.7e-31 139.8 301 36.5
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 3.4e-29 133.3 152 44.7
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 3.8e-28 129.8 156 48.7
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 6.4e-28 129.0 283 39.6
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 8.4e-28 128.6 285 39.6
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.1e-27 128.3 294 34.0
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 9.0e-22 108.6 293 35.5
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 2.0e-21 107.5 201 38.8
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 4.9e-20 102.8 122 47.5
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.3e-16 90.1 175 42.9
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.2e-13 81.6 124 39.5
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 1.5e-13 81.3 287 28.2
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 6.5e-12 75.9 97 56.7
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 1.5e-08 64.7 78 44.9


User provided reference genes

Program Settings