Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 1.3e-48 196.1 97 100.0
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 3.9e-21 104.8 104 59.6
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.3e-19 99.8 106 56.6
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 3.7e-19 98.2 106 55.7
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 8.2e-19 97.1 106 54.7
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.8e-18 95.9 104 52.9
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 5.5e-15 84.3 101 50.5
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 5.5e-15 84.3 97 48.5
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.1e-14 82.4 94 54.3
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 2.7e-14 82.0 90 54.4
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 2.3e-13 79.0 96 47.9
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 3.9e-13 78.2 98 45.9
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 5.1e-13 77.8 98 45.9
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 5.1e-13 77.8 87 55.2
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 6.7e-13 77.4 88 53.4
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 3.3e-12 75.1 91 44.0
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 4.3e-12 74.7 92 48.9
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 4.3e-12 74.7 87 48.3
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 4.3e-12 74.7 87 47.1
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 9.7e-12 73.6 87 50.6
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 1.3e-11 73.2 92 51.1
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 2.2e-11 72.4 90 50.0
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 2.8e-11 72.0 83 49.4
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 3.7e-11 71.6 95 46.3
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 4.8e-11 71.2 101 44.6
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 6.3e-11 70.9 91 42.9
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 6.3e-11 70.9 91 49.5
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 8.2e-11 70.5 78 51.3
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 1.1e-10 70.1 90 50.0
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 1.4e-10 69.7 97 41.2
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 1.4e-10 69.7 84 48.8
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 1.8e-10 69.3 88 43.2
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 2.4e-10 68.9 94 45.7
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 2.4e-10 68.9 84 47.6
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 2.4e-10 68.9 97 42.3
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 3.1e-10 68.6 62 50.0
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 3.1e-10 68.6 90 44.4
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 5.3e-10 67.8 81 50.6
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 5.3e-10 67.8 69 52.2
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 6.9e-10 67.4 32 84.4
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 6.9e-10 67.4 95 44.2
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 1.2e-09 66.6 81 44.4
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 1.2e-09 66.6 92 45.7
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 2.0e-09 65.9 93 43.0
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 3.4e-09 65.1 87 40.2
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 4.5e-09 64.7 86 41.9
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 5.9e-09 64.3 87 41.4
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 7.6e-09 63.9 88 44.3
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 1.0e-08 63.5 86 44.2
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 1.3e-08 63.2 34 70.6
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 1.7e-08 62.8 78 46.2
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 2.2e-08 62.4 84 44.0
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 2.9e-08 62.0 98 38.8
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 8.5e-08 60.5 32 75.0
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 2.5e-07 58.9 50 54.0
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 3.2e-07 58.5 71 43.7
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 4.2e-07 58.2 36 63.9


User provided reference genes

Program Settings