Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 1.9e-267 925.2 463 100.0
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 5.6e-235 817.4 457 89.5
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 7.4e-235 817.0 464 88.1
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 8.4e-223 776.9 471 83.2
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 3.5e-221 771.5 465 84.1
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 1.8e-220 769.2 466 83.5
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 5.1e-220 767.7 465 83.9
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 5.7e-219 764.2 465 83.7
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 1.6e-218 762.7 465 83.9
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 3.7e-218 761.5 465 82.8
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 8.2e-218 760.4 465 83.7
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 9.0e-217 756.9 465 82.8
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 1.2e-216 756.5 468 83.1
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 2.0e-216 755.7 464 82.3
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 1.3e-215 753.1 464 81.9
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 3.8e-215 751.5 464 81.7
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 1.1e-214 750.0 464 81.9
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 5.7e-211 737.6 463 79.0
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 4.5e-208 728.0 479 76.8
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 5.0e-207 724.5 463 78.8
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 4.2e-206 721.5 463 78.4
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 1.4e-204 716.5 464 78.0
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 3.9e-204 714.9 464 78.2
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 4.4e-203 711.4 470 77.0
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 3.7e-202 708.4 463 79.5
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 1.1e-201 706.8 463 77.5
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 1.2e-200 703.4 464 76.1
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 2.6e-200 702.2 445 80.4
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 1.1e-198 696.8 480 76.0
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 5.5e-198 694.5 464 75.9
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 5.5e-198 694.5 463 76.2
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 1.8e-196 689.5 464 75.0
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 4.0e-196 688.3 465 74.4
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 1.5e-195 686.4 481 74.6
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 3.3e-195 685.3 466 74.5
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 5.7e-195 684.5 464 75.9
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 7.5e-195 684.1 464 74.6
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 7.5e-195 684.1 466 75.3
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 2.4e-193 679.1 464 73.5
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 5.3e-193 677.9 458 76.2
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 7.0e-193 677.6 464 75.9
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 9.1e-193 677.2 463 73.4
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 1.2e-192 676.8 463 73.4
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 1.7e-191 672.9 498 70.9
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 2.2e-191 672.5 464 72.6
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 1.5e-190 669.8 457 74.8
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 3.0e-188 662.1 461 71.6
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 4.0e-188 661.8 481 72.1
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 5.2e-188 661.4 455 75.4
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 5.2e-188 661.4 461 72.7
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 5.2e-188 661.4 466 73.4
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 1.1e-185 653.7 460 73.5
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 2.4e-185 652.5 445 76.0
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 3.1e-185 652.1 463 72.6
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 9.1e-185 650.6 464 72.0
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 1.2e-184 650.2 493 69.0
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 2.7e-184 649.0 466 72.1
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 3.5e-184 648.7 458 73.4
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 1.3e-183 646.7 465 71.6
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.7e-183 646.4 468 73.1
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 1.7e-183 646.4 458 71.8
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 2.2e-183 646.0 465 71.6
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 2.2e-183 646.0 457 72.6
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 3.8e-183 645.2 543 62.6
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 8.5e-183 644.0 465 71.2
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 2.5e-182 642.5 461 71.8
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 4.2e-182 641.7 466 71.5
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 7.2e-182 641.0 466 71.2
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 1.2e-181 640.2 466 71.5
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 1.6e-181 639.8 464 71.1
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 2.1e-181 639.4 477 70.9
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 2.7e-181 639.0 435 76.1
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 2.7e-181 639.0 460 70.4
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 8.0e-181 637.5 455 72.1
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 1.0e-180 637.1 458 71.8
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 2.3e-180 636.0 465 70.5
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 1.5e-179 633.3 459 69.7
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 2.6e-179 632.5 458 71.6
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 2.6e-179 632.5 460 70.9
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 3.4e-179 632.1 460 70.9
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 3.4e-179 632.1 460 70.9
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 4.9e-178 628.2 463 69.8
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 1.8e-177 626.3 462 70.6
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 4.5e-176 621.7 463 69.1
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 5.9e-176 621.3 458 70.3
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 5.9e-176 621.3 463 69.3
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 7.7e-176 620.9 457 71.6
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 7.7e-176 620.9 451 71.4
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 1.0e-175 620.5 436 73.2
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 1.3e-175 620.2 451 71.4
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 2.9e-175 619.0 459 71.0
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 3.8e-175 618.6 460 70.2
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 5.0e-175 618.2 458 71.8
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 6.6e-175 617.8 463 69.1
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 1.1e-174 617.1 455 68.1
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 1.9e-174 616.3 456 70.4
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 5.6e-174 614.8 458 70.3
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 1.2e-173 613.6 461 69.8
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 1.6e-173 613.2 459 71.0
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 2.8e-173 612.5 459 68.6
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 2.8e-173 612.5 457 71.6
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 3.6e-173 612.1 461 70.7
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 6.1e-173 611.3 463 69.3
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 1.4e-172 610.1 458 69.0
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 2.3e-172 609.4 459 70.4
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 3.0e-172 609.0 461 70.3
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 6.8e-172 607.8 436 70.4
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 2.6e-171 605.9 454 69.6
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 4.4e-171 605.1 456 69.1
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 3.7e-170 602.1 466 68.9
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 1.8e-169 599.7 427 72.8
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 1.9e-166 589.7 447 71.4
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 2.1e-165 586.3 464 65.5
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 2.8e-165 585.9 457 68.9
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 6.2e-165 584.7 447 70.7
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 3.3e-158 562.4 447 67.3
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 1.4e-156 557.0 523 57.4
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 4.9e-154 548.5 455 63.1
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 4.9e-154 548.5 429 68.5
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 1.4e-153 547.0 472 62.3
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 9.2e-153 544.3 421 69.4
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.8e-148 530.0 435 62.3
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 2.2e-146 523.1 453 60.9
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 1.9e-142 510.0 461 60.5
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.5e-142 509.6 442 62.9
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 3.8e-138 495.7 424 64.6
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 3.8e-138 495.7 516 56.0
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 4.2e-137 492.3 328 76.2
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 9.6e-134 481.1 464 57.1
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.5e-131 473.8 438 56.6
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 1.9e-126 456.8 385 63.1
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 3.1e-124 449.5 460 53.5
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 4.0e-124 449.1 349 67.9
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 9.9e-123 444.5 297 78.1
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 1.7e-122 443.7 485 52.4
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 3.7e-109 399.4 465 51.0
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 3.9e-103 379.4 258 75.2
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 3.9e-103 379.4 466 47.0
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 2.2e-93 347.1 335 58.5
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 3.7e-93 346.3 326 61.0
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.9e-89 334.0 290 62.1
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 4.7e-88 329.3 261 67.0
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 1.1e-84 318.2 480 42.1
Cpa.g.sc10.20 Carica papaya HOM05D003886 ORTHO05D004587 4.0e-79 299.7 202 76.7
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 6.7e-79 298.9 218 69.7
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 6.3e-77 292.4 184 79.9
CARHR072690 Cardamine hirsuta HOM05D003886 ORTHO05D004587 4.5e-75 286.2 202 74.3
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 6.5e-74 282.3 333 49.2
Os09g0284600 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 5.2e-71 272.7 225 65.3
PGSC0003DMG400013092 Solanum tuberosum HOM05D003886 ORTHO05D004587 5.2e-71 272.7 201 69.7
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 4.4e-70 269.6 535 36.6
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 3.7e-69 266.5 237 61.2
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 1.6e-59 234.6 219 53.9
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 1.7e-58 231.1 161 75.8
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 1.4e-55 221.5 293 47.1
ClCG03G018040 Citrullus lanatus HOM05D003886 ORTHO05D004587 1.1e-49 201.8 131 76.3
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 1.6e-48 198.0 127 79.5
SEGI_16863 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 2.1e-48 197.6 173 58.4
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 7.5e-46 189.1 169 55.0
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 2.9e-45 187.2 394 34.5
ATR0751G177 Amborella trichopoda HOM05D003886 ORTHO05D004587 2.7e-43 180.6 138 66.7
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 6.6e-42 176.0 304 37.2
PRCOL_00004606 Prasinoderma coloniale HOM05D003886 ORTHO05D004587 6.0e-35 152.9 302 35.1
Aqoxy6G02601 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 3.9e-34 150.2 157 52.9
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 1.8e-31 141.4 154 54.5
Haze_16250 Corylus avellana HOM05D003886 ORTHO05D004587 1.1e-28 132.1 104 65.4
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 1.4e-28 131.7 125 61.6
MBI11_g15900_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 3.5e-27 127.1 77 79.2
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 7.8e-27 125.9 79 84.8
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 5.6e-25 119.8 126 55.6
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 5.8e-22 109.8 113 60.2
BcaB05g25166 Brassica carinata HOM05D000912 ORTHO05D001232 1.7e-18 98.2 75 69.3
Dinv30975 Davidia involucrata HOM05D000190 ORTHO05D000113 9.0e-15 85.9 121 47.9
Lj5C312T17 Lonicera japonica HOM05D001538 ORTHO05D004587 3.4e-14 84.0 109 49.5
Gohir.A07G077000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 9.9e-14 82.4 53 84.9
arahy.Tifrunner.gnm1.ann1.EDPG13 Arachis hypogaea HOM05D003961 ORTHO05D038865 4.2e-12 77.0 112 44.6
CAN.G1600.1 Capsicum annuum HOM05D003886 ORTHO05D004587 9.3e-12 75.9 46 78.3
ClCG03G018030 Citrullus lanatus HOM05D003886 ORTHO05D004587 3.0e-10 70.9 50 68.0
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 3.0e-10 70.9 51 68.6
Lsat_1_v5_gn_7_81560 Lactuca sativa HOM05D000267 ORTHO05D029881 1.1e-07 62.4 76 51.3
SHI26090 Sapria himalayana HOM05D005069 ORTHO05D006024 1.8e-07 61.6 61 50.8
TWI38G0197 Tripterygium wilfordii HOM05D002054 ORTHO05D005362 5.8e-06 56.6 155 30.3
arahy.Tifrunner.gnm1.ann1.6Q3TNQ Arachis hypogaea HOM05D000799 ORTHO05D000629 7.6e-06 56.2 110 35.5
SHI44505 Sapria himalayana HOM05D003886 ORTHO05D009901 7.6e-06 56.2 36 66.7


User provided reference genes

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