Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 7.7e-183 643.7 321 100.0
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 9.5e-149 530.4 324 84.0
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 1.2e-148 530.0 324 83.6
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 3.6e-148 528.5 324 84.0
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.4e-144 515.8 315 82.9
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 5.4e-144 514.6 324 81.8
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 2.1e-135 486.1 322 78.6
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-135 486.1 321 76.9
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 4.6e-135 485.0 336 75.6
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.3e-134 483.4 321 76.6
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 5.1e-134 481.5 336 75.3
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.6e-133 478.0 321 75.1
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 7.3e-133 477.6 344 72.4
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.8e-131 473.0 321 74.8
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 9.0e-131 470.7 336 75.3
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 8.4e-129 464.2 330 72.1
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 5.4e-128 461.5 322 74.2
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 9.3e-128 460.7 335 73.7
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.0e-126 457.2 322 73.6
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 2.3e-126 456.1 319 72.1
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 6.7e-126 454.5 320 72.8
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 6.7e-126 454.5 319 72.1
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 3.3e-125 452.2 320 71.6
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 9.6e-125 450.7 332 72.9
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 3.7e-124 448.7 330 72.7
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 1.1e-123 447.2 329 72.6
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 3.1e-123 445.7 332 72.3
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 5.3e-123 444.9 326 70.9
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 6.9e-123 444.5 321 69.8
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 5.8e-122 441.4 319 74.3
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-121 439.1 320 70.9
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 4.9e-121 438.3 325 69.8
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 4.9e-121 438.3 332 69.0
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 3.2e-120 435.6 291 78.4
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 9.3e-120 434.1 325 70.8
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 2.7e-119 432.6 328 68.3
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.0e-118 430.6 324 70.4
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 3.0e-118 429.1 336 68.2
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 3.0e-118 429.1 328 68.6
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.9e-118 428.7 321 70.1
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 7.4e-117 424.5 326 68.1
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 7.4e-117 424.5 326 67.8
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 1.6e-116 423.3 303 73.3
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 2.8e-116 422.5 325 68.0
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 3.7e-116 422.2 329 67.5
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.4e-115 420.2 304 70.4
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 3.1e-115 419.1 330 64.5
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 1.2e-114 417.2 308 68.8
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 2.6e-114 416.0 324 67.6
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 1.0e-113 414.1 323 67.8
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 2.2e-113 412.9 328 65.5
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 3.2e-112 409.1 317 66.2
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.3e-110 403.7 370 59.7
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.8e-110 403.3 328 64.6
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 5.1e-110 401.7 330 65.2
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 3.7e-108 395.6 297 68.0
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 4.8e-108 395.2 295 68.1
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.1e-107 394.0 321 66.0
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 1.8e-107 393.3 322 63.7
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 2.4e-107 392.9 327 64.2
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 6.9e-107 391.3 295 67.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.2e-106 390.6 297 66.7
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 1.2e-106 390.6 322 64.9
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 2.0e-106 389.8 334 62.3
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-104 384.0 319 64.6
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 3.9e-102 375.6 337 61.4
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 1.1e-101 374.0 276 71.0
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 2.0e-101 373.2 324 62.7
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.5e-98 363.6 363 55.9
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 2.6e-98 362.8 272 67.3
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 1.7e-97 360.1 292 64.7
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 1.9e-96 356.7 298 64.1
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 2.8e-92 342.8 276 64.5
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 6.3e-92 341.7 325 58.8
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.9e-89 332.8 275 64.7
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.1e-88 330.9 336 54.8
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 1.9e-88 330.1 211 76.8
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 2.5e-88 329.7 326 55.5
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 1.8e-86 323.6 297 56.9
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 1.5e-85 320.5 225 71.6
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 4.4e-85 318.9 213 75.6
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.3e-84 315.1 321 58.3
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.0e-83 311.6 307 57.3
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-82 310.8 321 57.6
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 2.2e-81 306.6 329 55.0
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 1.5e-80 303.9 321 52.3
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 9.4e-80 301.2 322 55.9
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-79 300.8 225 71.1
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-79 300.1 321 55.8
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-75 287.7 190 74.2
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 3.1e-75 286.2 217 69.1
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 6.3e-68 261.9 272 52.9
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.5e-66 256.1 175 73.1
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 4.0e-62 242.7 179 70.9
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 2.6e-61 240.0 369 39.3
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.0e-57 228.0 171 69.0
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 6.1e-55 218.8 166 68.7
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 1.2e-50 204.5 175 62.3
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.7e-49 200.7 300 39.7
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 2.3e-49 200.3 129 76.0
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.7e-44 184.1 292 40.8
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 1.7e-41 174.1 275 39.3
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 2.1e-39 167.2 148 60.8
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 4.9e-28 129.4 246 36.6
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 2.0e-21 107.5 101 58.4
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 2.9e-20 103.6 69 72.5
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 9.3e-19 98.6 90 62.2
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 2.1e-18 97.4 99 51.5
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 9.3e-11 72.0 319 24.8
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 3.0e-09 67.0 41 75.6
BcaC05g25535 Brassica carinata HOM05D007396 ORTHO05D009228 3.1e-06 57.0 102 35.3


User provided reference genes

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