Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G025200 Prunus persica HOM05D005956 ORTHO05D007197 1.5e-259 899.0 459 100.0
MD17G1161200 Malus domestica HOM05D005956 ORTHO05D007197 1.6e-189 666.4 427 80.8
RcHm_v2.0_Chr2g0149071 Rosa chinensis HOM05D005956 ORTHO05D007197 5.3e-185 651.4 424 79.5
FvH4_6g36600 Fragaria vesca HOM05D005956 ORTHO05D007197 6.5e-175 617.8 424 75.7
FAN02G1317 Fragaria x ananassa HOM05D005956 ORTHO05D007197 7.2e-166 587.8 409 75.1
FAN14G1696 Fragaria x ananassa HOM05D005956 ORTHO05D007197 1.2e-165 587.0 409 74.8
FAN09G1770 Fragaria x ananassa HOM05D005956 ORTHO05D007197 3.3e-163 578.9 409 74.3
CANSAT01G3224 Cannabis sativa HOM05D005956 ORTHO05D007197 1.5e-139 500.4 424 61.6
QL07p046118 Quercus lobata HOM05D005956 ORTHO05D007197 1.0e-135 487.6 414 65.2
CiPaw.01G207000 Carya illinoinensis HOM05D005956 ORTHO05D007197 1.3e-130 470.7 444 61.5
Cfa003426 Carpinus fangiana HOM05D005956 ORTHO05D007197 7.0e-129 464.9 415 62.2
Duzib192G0068 Durio zibethinus HOM05D005956 ORTHO05D007197 2.3e-119 433.3 353 62.3
Potri.007G001800 Populus trichocarpa HOM05D005956 ORTHO05D007197 2.3e-119 433.3 402 57.5
Ciclev10013933m.g Citrus clementina HOM05D005956 ORTHO05D007197 1.1e-118 431.0 415 55.9
Sabra07G0001300 Salix brachista HOM05D005956 ORTHO05D007197 1.5e-118 430.6 383 58.2
Gohir.D06G117400 Gossypium hirsutum HOM05D005956 ORTHO05D007197 5.6e-118 428.7 336 64.6
Gorai.010G135000 Gossypium raimondii HOM05D005956 ORTHO05D007197 9.5e-118 427.9 347 62.8
Atru.chr1.2600 Acer truncatum HOM05D005956 ORTHO05D007197 2.1e-117 426.8 397 58.9
Manes.14G006900 Manihot esculenta HOM05D005956 ORTHO05D007197 1.2e-112 411.0 412 53.6
Sed0023146 Sechium edule HOM05D005956 ORTHO05D007197 7.8e-112 408.3 427 53.4
MELO3C020528.2 Cucumis melo HOM05D005956 ORTHO05D007197 3.9e-111 406.0 431 54.1
CsaV3_1G036410 Cucumis sativus L. HOM05D005956 ORTHO05D007197 6.6e-111 405.2 432 53.5
Thecc.06G054100 Theobroma cacao HOM05D005956 ORTHO05D007197 7.3e-110 401.7 368 57.1
Haze_16217 Corylus avellana HOM05D005956 ORTHO05D007197 5.2e-108 395.6 582 44.5
COL.COLO4_25126 Corchorus olitorius HOM05D005956 ORTHO05D007197 1.2e-107 394.4 344 59.0
Hund05666 Selenicereus undatus HOM05D005956 ORTHO05D007197 3.8e-106 389.4 336 58.9
Actinidia21896 Actinidia chinensis HOM05D005956 ORTHO05D007197 6.4e-106 388.7 390 55.4
FvH4_4g20560 Fragaria vesca HOM05D005956 ORTHO05D007197 1.9e-105 387.1 304 68.8
Eucgr.J03191 Eucalyptus grandis HOM05D005956 ORTHO05D007197 2.7e-104 383.3 374 53.7
PGR083G0114 Punica granatum HOM05D005956 ORTHO05D007197 7.8e-104 381.7 356 58.1
TWI12G1352 Tripterygium wilfordii HOM05D005956 ORTHO05D007197 7.6e-99 365.2 423 49.9
Carub.0002s2578 Capsella rubella HOM05D005956 ORTHO05D007197 9.3e-97 358.2 339 55.5
Nitab4.5_0000499g0110 Nicotiana tabacum HOM05D005956 ORTHO05D007197 3.5e-96 356.3 344 56.4
Atru.chr1.2601 Acer truncatum HOM05D005956 ORTHO05D007197 7.9e-96 355.1 269 68.0
Cpa.g.sc176.24 Carica papaya HOM05D005956 ORTHO05D007197 5.1e-95 352.4 403 50.6
AUR62000122 Chenopodium quinoa HOM05D005956 ORTHO05D007197 8.7e-95 351.7 375 50.4
BraA07t31918Z Brassica rapa HOM05D000309 ORTHO05D007197 1.1e-94 351.3 364 53.0
CSS0010876 Camellia sinensis var. sinensis HOM05D005956 ORTHO05D007197 1.1e-94 351.3 365 52.9
Rhsim08G0251500 Rhododendron simsii HOM05D005956 ORTHO05D007197 3.7e-93 346.3 342 55.3
CAN.G790.4 Capsicum annuum HOM05D005956 ORTHO05D007197 4.8e-93 345.9 368 52.2
Sopen03g041770 Solanum pennellii HOM05D005956 ORTHO05D007197 6.2e-93 345.5 390 51.0
arahy.Tifrunner.gnm1.ann1.12WCBU Arachis hypogaea HOM05D005956 ORTHO05D007197 1.8e-92 344.0 340 52.1
PSO170G2336 Papaver somniferum HOM05D005956 ORTHO05D007197 4.5e-91 339.3 439 46.7
EL10Ac7g17213 Beta vulgaris HOM05D005956 ORTHO05D007197 9.9e-91 338.2 430 46.3
arahy.Tifrunner.gnm1.ann1.XHCR8J Arachis hypogaea HOM05D005956 ORTHO05D007197 1.7e-90 337.4 407 47.4
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 3.8e-90 336.3 421 48.7
Sc05g0006980 Simmondsia chinensis HOM05D005956 ORTHO05D007197 6.4e-90 335.5 407 49.6
arahy.Tifrunner.gnm1.ann1.03KM4I Arachis hypogaea HOM05D005956 ORTHO05D007197 1.1e-89 334.7 404 47.0
ClCG03G000530 Citrullus lanatus HOM05D005956 ORTHO05D007197 1.9e-89 334.0 432 48.4
Aa31LG4G2050 Aethionema arabicum HOM05D005956 ORTHO05D007197 2.4e-89 333.6 353 50.4
Phvul.005G185600 Phaseolus vulgaris HOM05D005956 ORTHO05D007197 7.1e-89 332.0 344 49.7
vmacro18734 Vaccinium macrocarpon HOM05D005956 ORTHO05D007197 9.3e-89 331.6 347 52.4
PGSC0003DMG400009194 Solanum tuberosum HOM05D005956 ORTHO05D007197 1.2e-88 331.3 425 47.5
VMungo1080G0145 Vigna mungo HOM05D005956 ORTHO05D007197 1.6e-88 330.9 348 49.7
AUR62019303 Chenopodium quinoa HOM05D005956 ORTHO05D007197 1.3e-87 327.8 375 47.7
Peaxi162Scf00038g02615 Petunia axillaris HOM05D005956 ORTHO05D007197 1.8e-87 327.4 324 55.2
Lalb_Chr24g0392721 Lupinus albus HOM05D005956 ORTHO05D007197 1.6e-85 320.9 323 51.1
Glyma.15G000800 Glycine max HOM05D005956 ORTHO05D007197 2.1e-85 320.5 359 48.2
unitig_578.g15928 Utricularia gibba HOM05D005956 ORTHO05D007197 3.7e-85 319.7 353 47.3
LjContig00482g0022414 Lotus japonicus HOM05D005956 ORTHO05D007197 1.4e-84 317.8 344 50.0
PSO063G0021 Papaver somniferum HOM05D005956 ORTHO05D007197 4.0e-84 316.2 441 45.6
Medtr6g003960 Medicago truncatula HOM05D005956 ORTHO05D007197 1.9e-81 307.4 321 50.2
CDE02G2643 Ceratophyllum demersum HOM05D005956 ORTHO05D007197 9.3e-81 305.1 343 50.1
TPR.G21350 Trifolium pratense HOM05D005956 ORTHO05D007197 1.6e-80 304.3 329 48.0
Solyc03g124040.3 Solanum lycopersicum HOM05D005956 ORTHO05D007197 2.3e-79 300.4 392 46.4
TAR636G0827 Trochodendron aralioides HOM05D005956 ORTHO05D007197 5.1e-79 299.3 280 57.9
Sp5g33970 Schrenkiella parvula HOM05D005956 ORTHO05D007197 8.7e-79 298.5 354 47.7
Cc07_g21430 Coffea canephora HOM05D005956 ORTHO05D007197 5.7e-78 295.8 368 48.4
C06p52830 Brassica napus HOM05D000309 ORTHO05D007197 7.4e-78 295.4 355 48.2
Migut.D02038 Erythranthe guttata HOM05D005956 ORTHO05D007197 9.0e-76 288.5 433 42.7
SGA_v2.0_scaffold69G23343 Striga asiatica HOM05D005956 ORTHO05D007197 2.6e-75 287.0 421 42.8
ATR0626G219 Amborella trichopoda HOM05D005956 ORTHO05D007197 3.4e-75 286.6 338 45.9
A07p44100 Brassica napus HOM05D000309 ORTHO05D007197 1.0e-74 285.0 363 46.0
BcaB03g16055 Brassica carinata HOM05D005956 ORTHO05D007197 2.9e-74 283.5 348 48.0
SGA_v2.0_scaffold7G04178 Striga asiatica HOM05D006000 ORTHO05D007749 3.8e-74 283.1 418 43.3
THA.LOC104812335 Tarenaya hassleriana HOM05D005956 ORTHO05D007197 6.5e-74 282.3 355 47.0
Lsat_1_v5_gn_4_106240 Lactuca sativa HOM05D005956 ORTHO05D007197 1.4e-73 281.2 353 45.6
Lj7A719T46 Lonicera japonica HOM05D005956 ORTHO05D007197 1.4e-73 281.2 349 48.1
BcaC08g47440 Brassica carinata HOM05D005956 ORTHO05D007197 1.9e-73 280.8 355 46.8
Ca_00996_v3 Cicer arietinum L. HOM05D005956 ORTHO05D007197 2.5e-73 280.4 322 46.3
Hma1.2p1_1111F.1_g258470 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 5.5e-73 279.3 344 48.0
Psat5g306040 Pisum sativum HOM05D005956 ORTHO05D007197 7.2e-73 278.9 313 46.3
BolC6t40300H Brassica oleracea HOM05D000163 ORTHO05D000219 1.6e-72 277.7 355 46.2
DCAR_030820 Daucus carota HOM05D005956 ORTHO05D007197 2.7e-72 276.9 392 45.2
CARHR072540 Cardamine hirsuta HOM05D005956 ORTHO05D007197 3.9e-71 273.1 297 51.2
Oeu039938.1 Olea europaea HOM05D005956 ORTHO05D007197 8.8e-71 271.9 354 46.3
SGA_v2.0_scaffold115G32115 Striga asiatica HOM05D005956 ORTHO05D007197 4.3e-70 269.6 398 43.0
Ah.05g168390 Amaranthus hybridus HOM05D005956 ORTHO05D007197 5.7e-70 269.2 408 40.7
Thhalv10018313m.g Eutrema salsugineum HOM05D005956 ORTHO05D007197 1.3e-69 268.1 340 46.2
AT1G78930 Arabidopsis thaliana HOM05D005956 ORTHO05D007197 5.3e-68 262.7 334 45.8
AL2G39370 Arabidopsis lyrata HOM05D005956 ORTHO05D007197 3.2e-65 253.4 226 59.7
HanXRQChr15g0497231 Helianthus annuus HOM05D005956 ORTHO05D007197 8.8e-63 245.4 431 37.8
Hma1.2p1_1111F.1_g258480 Hydrangea macrophylla HOM05D005956 ORTHO05D007197 2.8e-61 240.4 277 50.2
Zm00001eb000010 Zea mays HOM05D005956 ORTHO05D007197 2.4e-60 237.3 415 37.1
Aqoxy7G02692 Aquilegia oxysepala HOM05D005956 ORTHO05D007197 1.5e-59 234.6 314 43.3
SalBow8G3086 Salvia bowleyana HOM05D005956 ORTHO05D007197 2.6e-59 233.8 343 42.6
Actinidia24382 Actinidia chinensis HOM05D005956 ORTHO05D007197 1.3e-58 231.5 340 41.5
HPP92_000245 Vanilla planifolia HOM05D005956 ORTHO05D007197 1.7e-58 231.1 360 39.7
MBI16_g10330_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 4.2e-57 226.5 417 39.3
Os09g0560100 Oryza sativa ssp. japonica HOM05D005956 ORTHO05D007197 7.2e-57 225.7 348 39.7
MD09G1167300 Malus domestica HOM05D005956 ORTHO05D007197 6.7e-55 219.2 158 75.9
ECA233G3598 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-53 214.2 353 38.2
Nn2g12784 Nelumbo nucifera HOM05D005956 ORTHO05D007197 8.2e-53 212.2 385 36.6
MBI16_g37212_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 2.8e-45 187.2 273 42.5
SGA_v2.0_scaffold115G32113 Striga asiatica HOM05D005956 ORTHO05D007197 4.8e-45 186.4 263 43.7
Zm00001eb320340 Zea mays HOM05D005956 ORTHO05D007197 1.6e-43 181.4 301 39.2
Dinv08767 Davidia involucrata HOM05D005956 ORTHO05D007197 4.5e-43 179.9 218 48.2
SEGI_15409 Sequoiadendron giganteum HOM05D005956 ORTHO05D007197 3.8e-42 176.8 234 41.9
SEGI_03409 Sequoiadendron giganteum HOM05D005956 ORTHO05D007197 2.1e-40 171.0 280 36.8
SGA_v2.0_scaffold1097G53840 Striga asiatica HOM05D005956 ORTHO05D007197 7.5e-30 136.0 110 56.4
MD09G1167200 Malus domestica HOM05D005956 ORTHO05D007197 5.2e-23 113.2 112 54.5
AagrBONN_evm.TU.Sc2ySwM_368.2861 Anthoceros agrestis HOM05D005956 ORTHO05D007197 2.0e-22 111.3 215 32.1
Nitab4.5_0005679g0030 Nicotiana tabacum HOM05D005956 ORTHO05D007197 2.0e-22 111.3 92 60.9
Pp3c18_18510 Physcomitrium patens HOM05D005956 ORTHO05D007197 6.4e-21 106.3 224 30.4
Mapoly0216s0005 Marchantia polymorpha HOM05D005956 ORTHO05D007197 1.1e-20 105.5 232 34.9
MBI16_g00686_MAGBIO Magnolia biondii HOM05D005956 ORTHO05D007197 9.2e-20 102.4 165 40.0
CBR_g20999 Chara braunii HOM05D005956 ORTHO05D001299 1.1e-17 95.5 203 30.0
CDE04G2942 Ceratophyllum demersum HOM05D005605 ORTHO05D007615 1.6e-11 75.1 148 33.1
Glyma.19G019500 Glycine max HOM05D005956 ORTHO05D007197 2.3e-10 71.2 91 44.0
CDE04G1094 Ceratophyllum demersum HOM05D005605 ORTHO05D007615 6.6e-10 69.7 135 33.3
arahy.Tifrunner.gnm1.ann1.X81K0T Arachis hypogaea HOM05D005956 ORTHO05D007197 1.9e-09 68.2 54 55.6
arahy.Tifrunner.gnm1.ann1.DBZ4H1 Arachis hypogaea HOM05D005956 ORTHO05D007197 1.6e-08 65.1 59 52.5
arahy.Tifrunner.gnm1.ann1.X8CU4B Arachis hypogaea HOM05D005956 ORTHO05D007197 2.8e-08 64.3 53 54.7
CDE02G0452 Ceratophyllum demersum HOM05D005956 ORTHO05D007197 5.2e-07 60.1 71 46.5
arahy.Tifrunner.gnm1.ann1.ZI8HJG Arachis hypogaea HOM05D005956 ORTHO05D007197 4.4e-06 57.0 62 46.8
Psat0s410g0120 Pisum sativum HOM05D005956 ORTHO05D007197 4.4e-06 57.0 42 61.9
Haze_02388 Corylus avellana HOM05D005605 ORTHO05D007615 5.8e-06 56.6 174 25.9
Thhalv10013311m.g Eutrema salsugineum HOM05D006454 ORTHO05D008024 5.8e-06 56.6 196 24.5
Glyma.06G230200 Glycine max HOM05D005956 ORTHO05D007197 9.9e-06 55.8 35 71.4
Gohir.A06G112700 Gossypium hirsutum HOM05D005956 ORTHO05D007197 9.9e-06 55.8 35 74.3
PGR083G1273 Punica granatum HOM05D007385 ORTHO05D009349 9.9e-06 55.8 157 26.1
SalBow5G4421 Salvia bowleyana HOM05D007385 ORTHO05D009349 9.9e-06 55.8 188 28.2


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