Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.8e-66 255.8 128 100.0
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 5.7e-52 207.6 125 82.4
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 1.6e-51 206.1 124 82.3
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.2e-51 203.8 123 81.3
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 1.1e-50 203.4 120 80.0
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 1.1e-50 203.4 120 80.0
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 1.2e-49 199.9 119 78.2
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 2.0e-49 199.1 120 81.7
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 2.0e-49 199.1 119 79.8
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 3.4e-49 198.4 118 78.8
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 5.8e-49 197.6 122 77.9
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.8e-49 197.6 124 77.4
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 5.8e-49 197.6 119 79.0
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 7.6e-49 197.2 115 86.1
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.0e-48 196.8 124 77.4
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 2.9e-48 195.3 118 78.0
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 3.8e-48 194.9 119 77.3
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 6.5e-48 194.1 117 79.5
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 6.5e-48 194.1 118 77.1
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 8.4e-48 193.7 120 76.7
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 8.4e-48 193.7 111 84.7
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.9e-47 192.6 124 75.0
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 2.5e-47 192.2 118 76.3
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 3.2e-47 191.8 120 75.8
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 4.2e-47 191.4 124 76.6
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 5.5e-47 191.0 123 74.0
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 7.1e-47 190.7 119 77.3
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 7.1e-47 190.7 117 77.8
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 9.3e-47 190.3 118 75.4
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 9.3e-47 190.3 118 76.3
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 1.6e-46 189.5 120 75.8
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 2.1e-46 189.1 117 76.1
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 2.1e-46 189.1 117 77.8
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 4.6e-46 188.0 120 73.3
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 4.6e-46 188.0 117 74.4
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.0e-45 186.8 120 72.5
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 2.3e-45 185.7 126 74.6
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 2.3e-45 185.7 118 75.4
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 3.0e-45 185.3 119 73.1
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 5.1e-45 184.5 147 66.7
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 3.3e-44 181.8 119 69.7
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 5.7e-44 181.0 118 72.0
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 1.6e-43 179.5 123 68.3
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 2.2e-43 179.1 117 72.6
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 4.8e-43 177.9 120 72.5
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 6.3e-43 177.6 119 68.9
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 6.3e-43 177.6 120 71.7
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 8.2e-43 177.2 118 74.6
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 3.1e-42 175.3 122 68.9
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 6.9e-42 174.1 121 71.1
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 6.9e-42 174.1 118 71.2
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 1.2e-41 173.3 144 61.1
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 1.5e-41 172.9 117 68.4
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.5e-41 172.9 99 83.8
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.5e-41 172.9 123 67.5
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 2.6e-41 172.2 117 67.5
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 3.4e-41 171.8 119 66.4
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 4.5e-41 171.4 117 66.7
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 4.5e-41 171.4 118 67.8
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 4.5e-41 171.4 107 78.5
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 7.7e-41 170.6 119 65.5
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 7.7e-41 170.6 119 65.5
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 7.7e-41 170.6 119 65.5
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 7.7e-41 170.6 119 65.5
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 7.7e-41 170.6 121 66.1
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 1.9e-39 166.0 121 65.3
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 1.9e-39 166.0 109 72.5
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 2.5e-39 165.6 117 65.0
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 3.2e-39 165.2 117 66.7
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 5.5e-39 164.5 120 63.3
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 9.4e-39 163.7 124 65.3
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 1.2e-38 163.3 119 68.1
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 2.1e-38 162.5 119 63.0
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.7e-38 162.2 120 62.5
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 3.6e-38 161.8 117 64.1
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 7.9e-38 160.6 106 71.7
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 2.3e-37 159.1 117 65.8
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 8.8e-37 157.1 121 63.6
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 7.4e-36 154.1 121 62.0
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 4.1e-34 148.3 119 58.0
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 7.7e-33 144.1 117 62.4
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 1.6e-30 136.3 116 59.5
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 6.1e-30 134.4 79 82.3
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 1.1e-28 130.2 77 79.2
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 5.7e-28 127.9 120 51.7
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 9.1e-26 120.6 78 73.1
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 3.2e-23 112.1 110 51.8
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.8e-21 106.3 80 66.2
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 3.0e-21 105.5 114 46.5
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 9.7e-20 100.5 62 75.8
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.4e-18 96.7 106 50.0
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 3.1e-18 95.5 79 62.0
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.6e-12 75.9 85 48.2
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 1.1e-10 70.5 102 42.2
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 4.1e-10 68.6 93 48.4
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 5.0e-08 61.6 45 62.2


User provided reference genes

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