Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.3G000500 Prunus persica HOM05D006579 ORTHO05D007783 3.4e-135 485.3 311 100.0
MD17G1285900 Malus domestica HOM05D006579 ORTHO05D007783 4.9e-118 428.3 309 89.6
Cfa004929 Carpinus fangiana HOM05D006579 ORTHO05D007783 3.4e-103 379.0 306 69.6
RcHm_v2.0_Chr3g0485501 Rosa chinensis HOM05D006579 ORTHO05D007783 5.0e-102 375.2 302 71.9
CANSAT25G2874 Cannabis sativa HOM05D006579 ORTHO05D007783 1.1e-98 364.0 312 74.4
Glyma.02G006400 Glycine max HOM05D006579 ORTHO05D007783 3.7e-97 359.0 310 66.8
FvH4_1g26040 Fragaria vesca HOM05D006579 ORTHO05D007783 3.1e-96 355.9 304 65.5
FAN19G0998 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.1e-96 355.9 304 65.5
Lalb_Chr06g0167181 Lupinus albus HOM05D006579 ORTHO05D007783 5.3e-96 355.1 318 66.4
arahy.Tifrunner.gnm1.ann1.3317JQ Arachis hypogaea HOM05D006579 ORTHO05D007783 2.6e-95 352.8 297 69.4
Phvul.007G207700 Phaseolus vulgaris HOM05D006579 ORTHO05D007783 5.9e-95 351.7 313 67.1
arahy.Tifrunner.gnm1.ann1.E1WP71 Arachis hypogaea HOM05D006579 ORTHO05D007783 1.0e-94 350.9 273 72.2
Ciclev10021552m.g Citrus clementina HOM05D006579 ORTHO05D007783 1.0e-94 350.9 270 71.9
GSVIVG01028219001 Vitis vinifera HOM05D006579 ORTHO05D007783 1.0e-94 350.9 305 68.2
CiPaw.07G127500 Carya illinoinensis HOM05D006579 ORTHO05D007783 1.3e-94 350.5 309 64.4
Manes.14G164500 Manihot esculenta HOM05D006579 ORTHO05D007783 1.3e-94 350.5 304 70.4
MELO3C005183.2 Cucumis melo HOM05D006579 ORTHO05D007783 1.7e-94 350.1 302 73.5
QL09p037462 Quercus lobata HOM05D006579 ORTHO05D007783 1.7e-94 350.1 268 70.5
Potri.014G110200 Populus trichocarpa HOM05D006579 ORTHO05D007783 2.9e-94 349.4 307 67.8
Thecc.01G328000 Theobroma cacao HOM05D006579 ORTHO05D007783 2.9e-94 349.4 304 65.8
Psat6g157680 Pisum sativum HOM05D006579 ORTHO05D007783 5.0e-94 348.6 317 63.4
Lj5g0006855 Lotus japonicus HOM05D006579 ORTHO05D007783 8.5e-94 347.8 312 65.4
Lalb_Chr21g0309921 Lupinus albus HOM05D006579 ORTHO05D007783 8.5e-94 347.8 307 68.1
ClCG01G007260 Citrullus lanatus HOM05D006579 ORTHO05D007783 1.1e-93 347.4 307 76.2
VMungo0720G0607 Vigna mungo HOM05D006579 ORTHO05D007783 1.1e-93 347.4 273 71.1
Duzib138G1509 Durio zibethinus HOM05D006579 ORTHO05D007783 1.5e-93 347.1 304 65.5
FAN28G1483 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.5e-93 345.1 303 64.0
Gohir.D11G111000 Gossypium hirsutum HOM05D006579 ORTHO05D007783 5.5e-93 345.1 303 65.3
Dinv33186 Davidia involucrata HOM05D006579 ORTHO05D007783 7.2e-93 344.7 302 68.9
CsaV3_5G018690 Cucumis sativus L. HOM05D006579 ORTHO05D007783 1.2e-92 344.0 303 74.9
COL.COLO4_23096 Corchorus olitorius HOM05D006579 ORTHO05D007783 2.1e-92 343.2 304 64.8
Gorai.007G118800 Gossypium raimondii HOM05D006579 ORTHO05D007783 2.1e-92 343.2 303 65.0
Nn8g39570 Nelumbo nucifera HOM05D006579 ORTHO05D007783 2.1e-92 343.2 302 65.6
Ca_10226_v3 Cicer arietinum L. HOM05D006579 ORTHO05D007783 2.7e-92 342.8 312 62.8
MBI15_g35678_MAGBIO Magnolia biondii HOM05D006579 ORTHO05D007783 2.7e-92 342.8 303 65.7
Glyma.10G140000 Glycine max HOM05D006579 ORTHO05D007783 4.7e-92 342.0 273 70.0
FAN23G1885 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.0e-91 339.3 307 63.2
FAN23G2819 Fragaria x ananassa HOM05D006579 ORTHO05D007783 3.0e-91 339.3 307 63.2
TAR362G0572 Trochodendron aralioides HOM05D006579 ORTHO05D007783 5.2e-91 338.6 301 68.1
Sed0009510 Sechium edule HOM05D006579 ORTHO05D007783 6.7e-91 338.2 303 73.9
Gohir.A11G106100 Gossypium hirsutum HOM05D006579 ORTHO05D007783 8.8e-91 337.8 303 64.7
TPR.G3075 Trifolium pratense HOM05D006579 ORTHO05D007783 1.1e-90 337.4 313 65.2
PGR042G1939 Punica granatum HOM05D006579 ORTHO05D007783 3.3e-90 335.9 301 61.8
Medtr1g085470 Medicago truncatula HOM05D006579 ORTHO05D007783 1.7e-89 333.6 313 64.5
Cc06_g22680 Coffea canephora HOM05D006579 ORTHO05D007783 2.2e-89 333.2 301 63.8
Nitab4.5_0002103g0080 Nicotiana tabacum HOM05D006579 ORTHO05D007783 1.1e-88 330.9 301 65.4
Aqoxy2G02395 Aquilegia oxysepala HOM05D006579 ORTHO05D007783 1.8e-88 330.1 307 68.1
Oeu038082.1 Olea europaea HOM05D006579 ORTHO05D007783 2.4e-88 329.7 303 62.4
Sabra14G0081200 Salix brachista HOM05D006579 ORTHO05D007783 3.1e-88 329.3 336 60.7
Eucgr.A00989 Eucalyptus grandis HOM05D006579 ORTHO05D007783 5.3e-88 328.6 306 64.1
FAN26G1368 Fragaria x ananassa HOM05D006579 ORTHO05D007783 5.3e-88 328.6 332 58.1
THA.LOC104825921 Tarenaya hassleriana HOM05D006579 ORTHO05D007783 9.1e-88 327.8 309 62.5
Nitab4.5_0001628g0050 Nicotiana tabacum HOM05D006579 ORTHO05D007783 4.5e-87 325.5 301 62.8
SalBow3G0048 Salvia bowleyana HOM05D006579 ORTHO05D007783 5.9e-87 325.1 300 61.7
Atru.chr5.832 Acer truncatum HOM05D006579 ORTHO05D007783 3.8e-86 322.4 265 73.6
DCAR_018237 Daucus carota HOM05D006579 ORTHO05D007783 3.8e-86 322.4 301 63.5
TWI23G0058 Tripterygium wilfordii HOM05D006579 ORTHO05D007783 3.8e-86 322.4 309 60.8
Carub.0001s0137 Capsella rubella HOM05D006579 ORTHO05D007783 1.1e-85 320.9 309 61.2
CAN.G179.22 Capsicum annuum HOM05D006579 ORTHO05D007783 1.1e-85 320.9 304 67.4
CARHR001640 Cardamine hirsuta HOM05D006579 ORTHO05D007783 4.2e-85 318.9 311 61.1
PSO210G5405 Papaver somniferum HOM05D006579 ORTHO05D007783 5.5e-85 318.5 273 65.9
Sopen01g030530 Solanum pennellii HOM05D006579 ORTHO05D007783 9.4e-85 317.8 304 68.4
Thhalv10008452m.g Eutrema salsugineum HOM05D006579 ORTHO05D007783 2.1e-84 316.6 307 63.8
PSO761G0510 Papaver somniferum HOM05D006579 ORTHO05D007783 2.1e-84 316.6 271 64.9
Aa31LG1G10170 Aethionema arabicum HOM05D006579 ORTHO05D007783 4.7e-84 315.5 305 62.3
Solyc01g068580.4 Solanum lycopersicum HOM05D006579 ORTHO05D007783 4.7e-84 315.5 308 66.9
Sp1g01410 Schrenkiella parvula HOM05D006579 ORTHO05D007783 8.0e-84 314.7 275 64.4
ATR0796G267 Amborella trichopoda HOM05D006579 ORTHO05D007783 1.8e-83 313.5 301 60.5
CSS0004948 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.0e-83 312.8 196 81.1
ECA248G0873 Erigeron canadensis HOM05D006579 ORTHO05D007783 4.0e-83 312.4 311 57.9
EL10Ac9g20927 Beta vulgaris HOM05D006579 ORTHO05D007783 6.8e-83 311.6 302 59.3
HanXRQChr01g0017841 Helianthus annuus HOM05D006579 ORTHO05D007783 1.5e-82 310.5 313 57.8
Cpa.g.sc57.48 Carica papaya HOM05D006579 ORTHO05D007783 3.4e-82 309.3 303 62.0
Hund07814 Selenicereus undatus HOM05D006579 ORTHO05D007783 4.4e-82 308.9 302 59.6
AT1G02330 Arabidopsis thaliana HOM05D006579 ORTHO05D007783 5.7e-82 308.5 315 61.9
Peaxi162Scf00309g00059 Petunia axillaris HOM05D006579 ORTHO05D007783 5.7e-82 308.5 196 79.1
AL1G11660 Arabidopsis lyrata HOM05D006579 ORTHO05D007783 1.3e-81 307.4 313 62.0
BcaC05g24612 Brassica carinata HOM05D006579 ORTHO05D007783 1.7e-81 307.0 310 61.9
C05p01100 Brassica napus HOM05D006579 ORTHO05D007783 1.7e-81 307.0 310 61.9
BraA10t42384Z Brassica rapa HOM05D006579 ORTHO05D007783 3.7e-81 305.8 308 62.0
BolC5t28891H Brassica oleracea HOM05D006579 ORTHO05D007783 6.3e-81 305.1 310 61.6
Hma1.2p1_1372F.1_g278650 Hydrangea macrophylla HOM05D006579 ORTHO05D007783 8.5e-78 294.7 180 83.9
AUR62037602 Chenopodium quinoa HOM05D006579 ORTHO05D007783 2.5e-77 293.1 302 57.0
PGSC0003DMG400000840 Solanum tuberosum HOM05D006579 ORTHO05D007783 4.2e-77 292.4 342 58.5
HPP92_026046 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.1e-76 290.0 304 58.2
Lsat_1_v5_gn_1_78561 Lactuca sativa HOM05D006579 ORTHO05D007783 3.6e-76 289.3 300 56.0
Migut.D00005 Erythranthe guttata HOM05D006579 ORTHO05D007783 1.5e-74 283.9 305 57.4
MSTRG.18055 Avicennia marina HOM05D006579 ORTHO05D007783 7.5e-74 281.6 300 60.0
Sc12g0008270 Simmondsia chinensis HOM05D006579 ORTHO05D007783 7.5e-74 281.6 300 57.0
Os03g0374100 Oryza sativa ssp. japonica HOM05D006579 ORTHO05D007783 2.2e-73 280.0 305 63.3
SGA_v2.0_scaffold417G51243 Striga asiatica HOM05D006579 ORTHO05D007783 6.3e-73 278.5 331 52.9
CSS0018503 Camellia sinensis var. sinensis HOM05D006579 ORTHO05D007783 3.8e-70 269.2 173 78.6
Actinidia21333 Actinidia chinensis HOM05D006579 ORTHO05D007783 1.2e-68 264.2 289 55.4
Rhsim01G0001200 Rhododendron simsii HOM05D006579 ORTHO05D007783 6.1e-68 261.9 173 79.2
Pp3c6_17910 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.4e-67 260.8 308 53.2
Zm00001eb018120 Zea mays HOM05D006579 ORTHO05D007783 2.6e-66 256.5 307 52.1
Mapoly0012s0210 Marchantia polymorpha HOM05D006579 ORTHO05D007783 2.8e-65 253.1 311 53.1
Ah.01g015750 Amaranthus hybridus HOM05D006579 ORTHO05D007783 2.3e-62 243.4 429 41.5
AagrBONN_evm.TU.Sc2ySwM_117.1030 Anthoceros agrestis HOM05D006579 ORTHO05D007783 6.6e-62 241.9 310 54.5
Pp3c5_5390 Physcomitrium patens HOM05D006579 ORTHO05D007783 1.6e-60 237.3 311 49.5
SHI19775 Sapria himalayana HOM05D006579 ORTHO05D007783 4.0e-59 232.6 309 49.8
unitig_747.g21528 Utricularia gibba HOM05D006579 ORTHO05D007783 1.1e-56 224.6 312 49.7
vmacro02350 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 2.8e-52 209.9 133 81.2
CBR_g3462 Chara braunii HOM05D006579 ORTHO05D007783 6.6e-46 188.7 221 51.1
Lju2566A1G36 Lonicera japonica HOM05D006579 ORTHO05D007783 7.3e-45 185.3 162 64.2
HanXRQChr09g0263751 Helianthus annuus HOM05D006579 ORTHO05D007783 1.7e-41 174.1 181 56.9
SEGI_25815 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 3.7e-41 172.9 126 73.8
HPP92_013492 Vanilla planifolia HOM05D006579 ORTHO05D007783 2.4e-35 153.7 196 51.0
Haze_05169 Corylus avellana HOM05D006579 ORTHO05D007783 8.9e-35 151.8 178 53.4
SMO367G0899 Selaginella moellendorffii HOM05D006579 ORTHO05D007783 2.3e-30 137.1 165 52.7
Cc00_g21250 Coffea canephora HOM05D006579 ORTHO05D007783 2.1e-28 130.6 77 84.4
AUR62039016 Chenopodium quinoa HOM05D006579 ORTHO05D007783 1.2e-26 124.8 170 47.6
SEGI_10424 Sequoiadendron giganteum HOM05D006579 ORTHO05D007783 1.6e-20 104.4 141 48.9
MCO04G420 Micromonas commoda HOM05D006579 ORTHO05D007783 4.2e-16 89.7 124 45.2
COL.COLO4_00282 Corchorus olitorius HOM05D006579 ORTHO05D007783 8.1e-12 75.5 131 42.7
Rhsim01G0001100 Rhododendron simsii HOM05D006579 ORTHO05D007783 4.0e-11 73.2 127 41.7
Lju2566A1T41 Lonicera japonica HOM05D006579 ORTHO05D007783 5.3e-11 72.8 42 83.3
vmacro02349 Vaccinium macrocarpon HOM05D006579 ORTHO05D007783 1.7e-09 67.8 127 41.7
BcaB03g13515 Brassica carinata HOM05D006579 ORTHO05D007783 1.2e-07 61.6 72 55.6
Lju2566A1T42 Lonicera japonica HOM05D006579 ORTHO05D007783 1.8e-06 57.8 128 38.3


User provided reference genes

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