Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G329100 Prunus persica HOM05D005039 ORTHO05D006145 2.9e-180 635.2 340 100.0
RcHm_v2.0_Chr1g0384591 Rosa chinensis HOM05D005039 ORTHO05D006145 2.3e-177 625.5 340 98.2
MD07G1310900 Malus domestica HOM05D005039 ORTHO05D006145 1.1e-176 623.2 340 97.9
FAN03G0337 Fragaria x ananassa HOM05D005039 ORTHO05D006145 2.2e-175 619.0 340 96.8
FvH4_7g34230 Fragaria vesca HOM05D005039 ORTHO05D006145 4.8e-175 617.8 340 96.5
ClCG09G017310 Citrullus lanatus HOM05D005039 ORTHO05D006145 4.1e-174 614.8 340 95.9
Dinv29126 Davidia involucrata HOM05D005039 ORTHO05D006145 4.1e-174 614.8 340 95.9
FAN10G2688 Fragaria x ananassa HOM05D005039 ORTHO05D006145 4.1e-174 614.8 340 95.9
FAN01G1789 Fragaria x ananassa HOM05D005039 ORTHO05D006145 1.2e-173 613.2 340 95.6
MELO3C021899.2 Cucumis melo HOM05D005039 ORTHO05D006145 1.5e-173 612.8 340 95.6
Manes.08G160900 Manihot esculenta HOM05D005039 ORTHO05D006145 2.0e-173 612.5 340 95.6
Aqoxy1G03063 Aquilegia oxysepala HOM05D005039 ORTHO05D006145 4.5e-173 611.3 340 95.3
Sed0001134 Sechium edule HOM05D005039 ORTHO05D006145 1.0e-172 610.1 340 94.7
CSS0008859 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 1.7e-172 609.4 340 96.5
Nn3g19238 Nelumbo nucifera HOM05D005039 ORTHO05D006145 2.9e-172 608.6 340 94.4
CsaV3_2G014060 Cucumis sativus L. HOM05D005039 ORTHO05D006145 6.5e-172 607.4 340 95.6
Eucgr.K00067 Eucalyptus grandis HOM05D005039 ORTHO05D006145 1.1e-171 606.7 340 94.4
CANSAT21G2526 Cannabis sativa HOM05D005039 ORTHO05D006145 1.4e-171 606.3 340 93.8
GSVIVG01024328001 Vitis vinifera HOM05D005039 ORTHO05D006145 1.4e-171 606.3 340 95.0
TAR629G1612 Trochodendron aralioides HOM05D005039 ORTHO05D006145 5.5e-171 604.4 340 93.8
Cfa016075 Carpinus fangiana HOM05D005039 ORTHO05D006145 6.1e-170 600.9 340 94.1
TWI79G0887 Tripterygium wilfordii HOM05D005039 ORTHO05D006145 6.1e-170 600.9 340 93.5
DCAR_020429 Daucus carota HOM05D005039 ORTHO05D006145 1.4e-169 599.7 340 93.2
Potri.013G077700 Populus trichocarpa HOM05D005039 ORTHO05D006145 1.8e-169 599.4 340 92.4
SGA_v2.0_scaffold188G40301 Striga asiatica HOM05D005039 ORTHO05D006145 3.9e-169 598.2 340 93.2
Gohir.A02G125900 Gossypium hirsutum HOM05D005039 ORTHO05D006145 8.8e-169 597.0 340 92.6
Gohir.D03G054700 Gossypium hirsutum HOM05D005039 ORTHO05D006145 8.8e-169 597.0 340 92.6
THA.LOC104805716 Tarenaya hassleriana HOM05D005039 ORTHO05D006145 1.1e-168 596.7 340 93.2
Ciclev10031435m.g Citrus clementina HOM05D005039 ORTHO05D006145 2.0e-168 595.9 340 93.2
Gorai.003G057600 Gossypium raimondii HOM05D005039 ORTHO05D006145 2.0e-168 595.9 340 92.4
MBI04_g12218_MAGBIO Magnolia biondii HOM05D005039 ORTHO05D006145 2.0e-168 595.9 341 92.7
QL09p020758 Quercus lobata HOM05D005039 ORTHO05D006145 2.0e-168 595.9 339 94.4
Lalb_Chr09g0320081 Lupinus albus HOM05D005039 ORTHO05D006145 4.4e-168 594.7 339 92.0
HanXRQChr16g0512151 Helianthus annuus HOM05D005039 ORTHO05D006145 7.4e-168 594.0 340 92.4
Thecc.05G222600 Theobroma cacao HOM05D005039 ORTHO05D006145 7.4e-168 594.0 340 92.4
Nn1g02122 Nelumbo nucifera HOM05D005039 ORTHO05D006145 9.7e-168 593.6 340 92.6
Lj3g0003232 Lotus japonicus HOM05D005039 ORTHO05D006145 2.8e-167 592.0 339 93.2
Atru.chr12.1876 Acer truncatum HOM05D005039 ORTHO05D006145 3.7e-167 591.7 340 91.8
SalBow7G2894 Salvia bowleyana HOM05D005039 ORTHO05D006145 3.7e-167 591.7 340 91.5
Ca_26497_v3 Cicer arietinum L. HOM05D005039 ORTHO05D006145 6.3e-167 590.9 340 92.9
ECA232G0266 Erigeron canadensis HOM05D005039 ORTHO05D006145 6.3e-167 590.9 340 91.8
Glyma.11G109900 Glycine max HOM05D005039 ORTHO05D006145 6.3e-167 590.9 340 92.1
Phvul.011G017800 Phaseolus vulgaris HOM05D005039 ORTHO05D006145 6.3e-167 590.9 340 92.6
ATR0829G179 Amborella trichopoda HOM05D005039 ORTHO05D006145 8.2e-167 590.5 340 90.9
Glyma.12G014800 Glycine max HOM05D005039 ORTHO05D006145 8.2e-167 590.5 340 92.4
Lsat_1_v5_gn_9_47921 Lactuca sativa HOM05D005039 ORTHO05D006145 1.8e-166 589.3 340 92.1
vmacro06372 Vaccinium macrocarpon HOM05D005039 ORTHO05D006145 2.4e-166 589.0 377 85.1
MSTRG.24939 Avicennia marina HOM05D005039 ORTHO05D006145 4.1e-166 588.2 340 91.5
Migut.C00159 Erythranthe guttata HOM05D005039 ORTHO05D006145 9.1e-166 587.0 340 91.5
Duzib106G2059 Durio zibethinus HOM05D005039 ORTHO05D006145 1.2e-165 586.6 340 91.2
Hund09811 Selenicereus undatus HOM05D005039 ORTHO05D006145 5.9e-165 584.3 364 87.4
Medtr5g005440 Medicago truncatula HOM05D005039 ORTHO05D006145 7.7e-165 583.9 339 92.0
Peaxi162Scf00802g00029 Petunia axillaris HOM05D005039 ORTHO05D006145 2.9e-164 582.0 341 90.6
Solyc07g045330.3 Solanum lycopersicum HOM05D005039 ORTHO05D006145 5.0e-164 581.3 341 90.6
Sopen07g023860 Solanum pennellii HOM05D005039 ORTHO05D006145 5.0e-164 581.3 341 90.6
Sabra13G0066500 Salix brachista HOM05D005039 ORTHO05D006145 6.5e-164 580.9 376 83.8
PSO782G0889 Papaver somniferum HOM05D005039 ORTHO05D006145 1.9e-163 579.3 341 90.6
Ah.13g072370 Amaranthus hybridus HOM05D005039 ORTHO05D006145 3.2e-163 578.6 340 92.4
CAN.G437.12 Capsicum annuum HOM05D005039 ORTHO05D006145 5.5e-163 577.8 341 90.0
Zm00001eb430290 Zea mays HOM05D005039 ORTHO05D006145 9.4e-163 577.0 340 89.1
PSO063G4466 Papaver somniferum HOM05D005039 ORTHO05D006145 1.2e-162 576.6 341 90.3
Lj3A884T54 Lonicera japonica HOM05D005039 ORTHO05D006145 1.4e-161 573.2 324 94.4
Carub.0007s1322 Capsella rubella HOM05D005039 ORTHO05D006145 1.8e-161 572.8 340 90.3
Sp7g25580 Schrenkiella parvula HOM05D005039 ORTHO05D006145 2.3e-161 572.4 340 89.4
Os04g0600800 Oryza sativa ssp. japonica HOM05D005039 ORTHO05D006145 3.0e-161 572.0 340 88.2
CARHR235330 Cardamine hirsuta HOM05D005039 ORTHO05D006145 3.4e-160 568.5 340 88.8
Thhalv10025115m.g Eutrema salsugineum HOM05D005039 ORTHO05D006145 4.4e-160 568.2 340 88.8
Aa31LG2G2190 Aethionema arabicum HOM05D005039 ORTHO05D006145 9.7e-160 567.0 340 88.2
BcaNung01651 Brassica carinata HOM05D005039 ORTHO05D006145 9.7e-160 567.0 340 89.1
C01p23870 Brassica napus HOM05D005039 ORTHO05D006145 1.3e-159 566.6 340 88.8
AL2G19600 Arabidopsis lyrata HOM05D005039 ORTHO05D006145 1.7e-159 566.2 340 88.5
AT4G27630 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 2.8e-159 565.5 340 89.1
A01p18920 Brassica napus HOM05D005039 ORTHO05D006145 3.7e-159 565.1 340 88.5
BcaC09g50566 Brassica carinata HOM05D005039 ORTHO05D006145 6.3e-159 564.3 340 88.5
BolC1t02332H Brassica oleracea HOM05D005039 ORTHO05D006145 6.3e-159 564.3 340 88.5
AT1G64990 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 1.4e-158 563.1 340 87.9
Carub.0002s1015 Capsella rubella HOM05D005039 ORTHO05D006145 5.3e-158 561.2 340 87.9
Sp5g19320 Schrenkiella parvula HOM05D005039 ORTHO05D006145 2.7e-157 558.9 340 87.1
EL10Ac3g05043 Beta vulgaris HOM05D005039 ORTHO05D006145 1.3e-156 556.6 416 76.7
C02p21070 Brassica napus HOM05D005039 ORTHO05D006145 3.8e-156 555.1 341 87.4
BraA02t06350Z Brassica rapa HOM05D005039 ORTHO05D006145 3.8e-156 555.1 341 87.4
CARHR056390 Cardamine hirsuta HOM05D005039 ORTHO05D006145 8.5e-156 553.9 340 87.1
A02p12960 Brassica napus HOM05D005039 ORTHO05D006145 2.1e-154 549.3 342 86.8
BraA01t01833Z Brassica rapa HOM05D005039 ORTHO05D006145 8.0e-154 547.4 368 81.5
BolC2t08248H Brassica oleracea HOM05D005039 ORTHO05D006145 1.8e-153 546.2 364 81.9
CSS0032758 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 5.2e-153 544.7 340 87.4
Duzib128G1855 Durio zibethinus HOM05D005039 ORTHO05D006145 3.4e-152 542.0 340 85.6
AUR62002093 Chenopodium quinoa HOM05D005039 ORTHO05D006145 1.7e-151 539.7 340 86.5
Nitab4.5_0006992g0040 Nicotiana tabacum HOM05D005039 ORTHO05D006145 1.8e-150 536.2 351 83.8
PGR142G1194 Punica granatum HOM05D005039 ORTHO05D006145 1.0e-148 530.4 312 91.0
Nitab4.5_0009864g0010 Nicotiana tabacum HOM05D005039 ORTHO05D006145 8.6e-148 527.3 341 85.3
Oeu027894.4 Olea europaea HOM05D005039 ORTHO05D006145 1.1e-147 526.9 340 83.8
unitig_0.g2070 Utricularia gibba HOM05D005039 ORTHO05D006145 5.2e-145 518.1 320 87.2
Sc13g0011000 Simmondsia chinensis HOM05D005039 ORTHO05D006145 1.6e-141 506.5 289 94.5
Actinidia34332 Actinidia chinensis HOM05D005039 ORTHO05D006145 6.6e-140 501.1 308 88.6
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea HOM05D005039 ORTHO05D006145 3.1e-137 492.3 289 91.7
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea HOM05D005039 ORTHO05D006145 3.1e-137 492.3 289 91.7
Psat7g155320 Pisum sativum HOM05D005039 ORTHO05D006145 5.2e-137 491.5 308 87.3
Mapoly0094s0006 Marchantia polymorpha HOM05D005039 ORTHO05D006145 4.4e-136 488.4 340 74.7
Rhsim03G0224300 Rhododendron simsii HOM05D005039 ORTHO05D006145 1.3e-135 486.9 323 83.9
CDE11G0732 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 1.1e-131 473.8 324 79.9
Actinidia08765 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.4e-129 466.8 289 88.6
AUR62028211 Chenopodium quinoa HOM05D005039 ORTHO05D006145 1.5e-123 446.8 294 83.3
CBR_g72647 Chara braunii HOM05D005039 ORTHO05D006145 4.1e-118 428.7 343 64.4
SMO304G0068 Selaginella moellendorffii HOM05D005039 ORTHO05D006145 9.2e-118 427.6 344 67.7
PGSC0003DMG401017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 3.0e-116 422.5 246 91.5
VMungo1127G0275 Vigna mungo HOM05D005039 ORTHO05D006145 1.1e-107 394.0 245 86.9
Cc02_g00100 Coffea canephora HOM05D005039 ORTHO05D006145 2.5e-107 392.9 244 86.5
CiPaw.05G212800 Carya illinoinensis HOM05D005039 ORTHO05D006145 6.2e-106 388.3 223 91.9
HPP92_014410 Vanilla planifolia HOM05D005039 ORTHO05D006145 3.8e-103 379.0 340 64.4
COL.COLO4_15139 Corchorus olitorius HOM05D005039 ORTHO05D006145 2.1e-93 346.7 312 65.7
AagrBONN_evm.TU.Sc2ySwM_369.165 Anthoceros agrestis HOM05D005039 ORTHO05D006145 1.8e-81 307.0 302 57.0
BcaB05g25317 Brassica carinata HOM05D005039 ORTHO05D006145 1.4e-78 297.4 183 83.6
AagrBONN_evm.TU.Sc2ySwM_369.410 Anthoceros agrestis HOM05D005039 ORTHO05D006145 5.9e-72 275.4 294 54.8
MD01G1239200 Malus domestica HOM05D005039 ORTHO05D006145 7.7e-72 275.0 236 68.2
BcaC03g14670 Brassica carinata HOM05D005039 ORTHO05D006145 1.1e-70 271.2 160 91.2
EL10Ac3g05835 Beta vulgaris HOM05D005039 ORTHO05D006145 3.6e-61 239.6 195 72.8
BcaB05g24073 Brassica carinata HOM05D005039 ORTHO05D006145 6.1e-61 238.8 140 92.1
Cc02_g00110 Coffea canephora HOM05D005039 ORTHO05D006145 5.0e-55 219.2 119 97.5
Cre16.g674739 Chlamydomonas reinhardtii HOM05D005039 ORTHO05D006145 2.6e-51 206.8 386 36.3
MCO06G137 Micromonas commoda HOM05D005039 ORTHO05D006145 5.3e-49 199.1 338 37.3
SEGI_29432 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 1.5e-46 191.0 111 91.0
CARHR057320 Cardamine hirsuta HOM05D005039 ORTHO05D006145 1.2e-45 188.0 125 83.2
Cpa.g.sc43.133 Carica papaya HOM05D005039 ORTHO05D006145 2.7e-45 186.8 111 90.1
Haze_00371 Corylus avellana HOM05D005039 ORTHO05D006145 1.7e-42 177.6 96 95.8
CSS0027952 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 4.5e-40 169.5 91 95.6
PRCOL_00000150 Prasinoderma coloniale HOM05D005039 ORTHO05D006145 9.8e-35 151.8 370 30.8
Cpa.g.sc43.132 Carica papaya HOM05D005039 ORTHO05D006145 2.8e-29 133.7 74 90.5
Carub.0008s0531 Capsella rubella HOM05D005039 ORTHO05D006145 1.4e-28 131.3 81 86.4
Oeu028985.2 Olea europaea HOM05D005039 ORTHO05D006145 4.1e-25 119.8 99 68.7
AagrBONN_evm.TU.Sc2ySwM_117.727 Anthoceros agrestis HOM05D005039 ORTHO05D006145 5.0e-23 112.8 81 59.3
CSS0015728 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 1.0e-20 105.1 53 98.1
SEGI_05893 Sequoiadendron giganteum HOM05D005039 ORTHO05D006145 1.4e-20 104.8 57 84.2
PGSC0003DMG402017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 1.2e-19 101.7 53 90.6
Carub.0008s0533 Capsella rubella HOM05D005039 ORTHO05D006145 4.6e-16 89.7 52 90.4
Zm00001eb027530 Zea mays HOM05D011105 ORTHO05D007705 4.6e-16 89.7 57 86.0
Actinidia24520 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.3e-15 88.2 44 95.5
GSVIVG01028619001 Vitis vinifera HOM05D005039 ORTHO05D048867 9.5e-14 82.0 74 62.2
MD01G1239000 Malus domestica HOM05D005039 ORTHO05D006145 1.6e-13 81.3 46 95.7
Potri.019G042201 Populus trichocarpa HOM05D005039 ORTHO05D006145 2.1e-13 80.9 52 84.6
EL10Ac7g16242 Beta vulgaris HOM05D005039 ORTHO05D006145 2.8e-13 80.5 44 93.2
MD01G1239100 Malus domestica HOM05D005039 ORTHO05D006145 7.8e-08 62.4 33 97.0


User provided reference genes

Program Settings