Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G328100 Prunus persica HOM05D004457 ORTHO05D005282 2.7e-183 645.2 324 100.0
MD07G1310300 Malus domestica HOM05D004457 ORTHO05D005282 6.2e-156 554.3 326 85.3
RcHm_v2.0_Chr1g0384491 Rosa chinensis HOM05D004457 ORTHO05D005282 2.6e-154 548.9 325 83.1
MD01G1237700 Malus domestica HOM05D004457 ORTHO05D005282 1.7e-153 546.2 326 83.7
FvH4_7g34140 Fragaria vesca HOM05D004457 ORTHO05D005282 3.3e-149 531.9 325 80.6
FAN10G1543 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.2e-145 519.2 338 76.6
Manes.09G128300 Manihot esculenta HOM05D004457 ORTHO05D005282 2.5e-144 515.8 324 77.5
Potri.013G079201 Populus trichocarpa HOM05D004457 ORTHO05D005282 9.3e-144 513.8 324 78.7
CiPaw.05G214800 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.2e-143 513.5 331 77.6
Thecc.05G219000 Theobroma cacao HOM05D004457 ORTHO05D005282 3.5e-143 511.9 324 78.4
Potri.013G079101 Populus trichocarpa HOM05D004457 ORTHO05D005282 2.3e-142 509.2 324 77.8
Cfa016064 Carpinus fangiana HOM05D004457 ORTHO05D005282 5.1e-142 508.1 324 78.1
Haze_00385 Corylus avellana HOM05D004457 ORTHO05D005282 4.3e-141 505.0 324 77.5
TWI60G0869 Tripterygium wilfordii HOM05D004457 ORTHO05D005282 7.4e-141 504.2 324 76.5
GSVIVG01024347001 Vitis vinifera HOM05D004457 ORTHO05D005282 1.3e-140 503.4 324 74.4
CiPaw.06G035200 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.0e-137 493.8 324 75.3
COL.COLO4_15192 Corchorus olitorius HOM05D004457 ORTHO05D005282 1.3e-137 493.4 324 74.7
CSS0048555 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 7.2e-136 487.6 324 74.7
PGR142G0056 Punica granatum HOM05D004457 ORTHO05D005282 1.0e-134 483.8 324 70.7
Eucgr.K00073 Eucalyptus grandis HOM05D004457 ORTHO05D005282 2.3e-134 482.6 327 72.2
Actinidia08758 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.1e-133 480.3 325 72.9
Actinidia34324 Actinidia chinensis HOM05D004457 ORTHO05D005282 1.7e-132 476.5 324 72.8
Glyma.11G009300 Glycine max HOM05D004457 ORTHO05D005282 1.7e-132 476.5 324 70.4
Atru.chr12.1918 Acer truncatum HOM05D004457 ORTHO05D005282 2.8e-132 475.7 324 73.5
Hma1.2p1_0419F.1_g149440 Hydrangea macrophylla HOM05D004457 ORTHO05D005282 3.7e-132 475.3 364 64.6
Glyma.01G233500 Glycine max HOM05D004457 ORTHO05D005282 1.4e-131 473.4 324 70.4
Nn6g33553 Nelumbo nucifera HOM05D004457 ORTHO05D005282 1.8e-131 473.0 324 69.4
Gorai.003G055700 Gossypium raimondii HOM05D004457 ORTHO05D005282 4.1e-131 471.9 324 71.6
arahy.Tifrunner.gnm1.ann1.R5JYMV Arachis hypogaea HOM05D004457 ORTHO05D005282 5.3e-131 471.5 325 70.8
Ciclev10021193m.g Citrus clementina HOM05D004457 ORTHO05D005282 5.3e-131 471.5 324 72.8
Cpa.g.sc43.116 Carica papaya HOM05D004457 ORTHO05D005282 9.1e-131 470.7 324 71.9
CiPaw.06G035100 Carya illinoinensis HOM05D004457 ORTHO05D005282 1.2e-130 470.3 324 71.3
arahy.Tifrunner.gnm1.ann1.9FAL4E Arachis hypogaea HOM05D004457 ORTHO05D005282 2.0e-130 469.5 325 70.5
CSS0037309 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.6e-130 469.2 324 71.9
CSS0045385 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.6e-130 469.2 324 72.2
Gohir.D03G053500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 2.6e-130 469.2 324 71.6
Gohir.A02G127500 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.3e-129 466.8 324 71.3
CSS0031792 Camellia sinensis var. sinensis HOM05D004457 ORTHO05D005282 2.9e-129 465.7 307 74.6
TAR375G0461 Trochodendron aralioides HOM05D004457 ORTHO05D005282 3.8e-129 465.3 324 70.7
Gorai.004G256600 Gossypium raimondii HOM05D004457 ORTHO05D005282 3.2e-128 462.2 324 70.7
Sabra13G0073500 Salix brachista HOM05D004457 ORTHO05D005282 3.2e-128 462.2 306 73.5
Phvul.002G041000 Phaseolus vulgaris HOM05D004457 ORTHO05D005282 9.4e-128 460.7 324 67.9
Aqoxy3G02297 Aquilegia oxysepala HOM05D004457 ORTHO05D005282 2.1e-127 459.5 325 69.8
Lalb_Chr09g0320121 Lupinus albus HOM05D004457 ORTHO05D005282 7.9e-127 457.6 325 68.9
Gohir.A08G221660 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.0e-126 457.2 324 70.4
Gohir.D08G241200 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.5e-125 453.4 324 70.1
Lj3A885T46 Lonicera japonica HOM05D004457 ORTHO05D005282 2.0e-125 453.0 329 69.3
AUR62028201 Chenopodium quinoa HOM05D004457 ORTHO05D005282 4.4e-125 451.8 324 67.0
EL10Ac3g05054 Beta vulgaris HOM05D004457 ORTHO05D005282 5.7e-125 451.4 324 66.4
Cc02_g00170 Coffea canephora HOM05D004457 ORTHO05D005282 9.7e-125 450.7 338 66.6
VMungo1215G3184 Vigna mungo HOM05D004457 ORTHO05D005282 1.3e-124 450.3 324 66.4
FAN28G1138 Fragaria x ananassa HOM05D004457 ORTHO05D005282 8.2e-124 447.6 325 71.7
Hund21100 Selenicereus undatus HOM05D004457 ORTHO05D005282 1.8e-123 446.4 324 67.3
Sed0007489 Sechium edule HOM05D004457 ORTHO05D005282 3.1e-123 445.7 324 67.3
AL2G19640 Arabidopsis lyrata HOM05D004457 ORTHO05D005282 5.9e-122 441.4 324 70.7
THA.LOC104805712 Tarenaya hassleriana HOM05D004457 ORTHO05D005282 7.7e-122 441.0 326 69.6
AT1G65020 Arabidopsis thaliana HOM05D004457 ORTHO05D005282 1.0e-121 440.7 324 70.4
Medtr5g007360 Medicago truncatula HOM05D004457 ORTHO05D005282 1.3e-121 440.3 324 65.4
LjContig00222g0016666 Lotus japonicus HOM05D004457 ORTHO05D005282 2.9e-121 439.1 325 68.0
Ca_24434_v3 Cicer arietinum L. HOM05D004457 ORTHO05D005282 3.8e-121 438.7 324 65.7
CsaV3_3G050090 Cucumis sativus L. HOM05D004457 ORTHO05D005282 2.5e-120 436.0 324 66.7
Rhsim03G0223200 Rhododendron simsii HOM05D004457 ORTHO05D005282 3.2e-120 435.6 380 58.7
Sp5g19410 Schrenkiella parvula HOM05D004457 ORTHO05D005282 2.7e-119 432.6 324 68.2
Aa31LG2G2220 Aethionema arabicum HOM05D004457 ORTHO05D005282 3.6e-119 432.2 342 66.1
ClCG09G017170 Citrullus lanatus HOM05D004457 ORTHO05D005282 1.0e-118 430.6 325 66.8
Oeu062823.1 Olea europaea HOM05D004457 ORTHO05D005282 1.8e-118 429.9 326 66.3
Carub.0002s1019 Capsella rubella HOM05D004457 ORTHO05D005282 5.2e-118 428.3 325 68.3
Psat2g189240 Pisum sativum HOM05D004457 ORTHO05D005282 5.2e-118 428.3 325 64.3
PSO063G5530 Papaver somniferum HOM05D004457 ORTHO05D005282 6.7e-118 427.9 324 64.8
Nitab4.5_0004530g0100 Nicotiana tabacum HOM05D004457 ORTHO05D005282 1.1e-117 427.2 324 65.7
TPR.G37899 Trifolium pratense HOM05D004457 ORTHO05D005282 1.5e-117 426.8 365 59.7
Sc13g0010930 Simmondsia chinensis HOM05D004457 ORTHO05D005282 2.0e-117 426.4 308 65.3
CsaV3_2G036630 Cucumis sativus L. HOM05D004457 ORTHO05D005282 2.6e-117 426.0 325 66.5
vmacro06531 Vaccinium macrocarpon HOM05D004457 ORTHO05D005282 2.6e-117 426.0 393 57.5
PSO782G5560 Papaver somniferum HOM05D004457 ORTHO05D005282 3.3e-117 425.6 324 64.5
Lsat_1_v5_gn_8_3720 Lactuca sativa HOM05D004457 ORTHO05D005282 7.4e-117 424.5 324 66.7
BraA07t30901Z Brassica rapa HOM05D004457 ORTHO05D005282 7.0e-115 417.9 324 66.4
FAN01G1413 Fragaria x ananassa HOM05D004457 ORTHO05D005282 4.5e-114 415.2 306 70.9
Solyc03g097180.3 Solanum lycopersicum HOM05D004457 ORTHO05D005282 5.9e-114 414.8 324 63.6
C06p38960 Brassica napus HOM05D004457 ORTHO05D005282 7.7e-114 414.5 325 66.5
BolC6t38988H Brassica oleracea HOM05D004457 ORTHO05D005282 7.7e-114 414.5 325 66.5
Thhalv10022467m.g Eutrema salsugineum HOM05D004457 ORTHO05D005282 1.3e-113 413.7 324 65.7
Peaxi162Scf00516g00661 Petunia axillaris HOM05D004457 ORTHO05D005282 1.7e-113 413.3 324 65.1
BcaB05g25319 Brassica carinata HOM05D004457 ORTHO05D005282 8.5e-113 411.0 325 64.6
BraA02t06354Z Brassica rapa HOM05D004457 ORTHO05D005282 8.5e-113 411.0 334 63.2
PGSC0003DMG400003162 Solanum tuberosum HOM05D004457 ORTHO05D005282 1.1e-112 410.6 324 63.3
BolC2t08250H Brassica oleracea HOM05D004457 ORTHO05D005282 7.2e-112 407.9 334 62.3
CAN.G1131.28 Capsicum annuum HOM05D004457 ORTHO05D005282 1.6e-111 406.8 309 65.7
Nitab4.5_0000021g0740 Nicotiana tabacum HOM05D004457 ORTHO05D005282 6.8e-110 401.4 315 63.8
C02p21100 Brassica napus HOM05D004457 ORTHO05D005282 1.2e-109 400.6 350 58.9
HanXRQChr04g0105271 Helianthus annuus HOM05D004457 ORTHO05D005282 2.0e-109 399.8 326 63.2
A02p12980 Brassica napus HOM05D004457 ORTHO05D005282 1.7e-108 396.7 360 58.6
A07p32750 Brassica napus HOM05D004457 ORTHO05D005282 8.3e-108 394.4 369 58.3
Migut.F00082 Erythranthe guttata HOM05D004457 ORTHO05D005282 1.9e-104 383.3 326 59.2
SalBow4G0372 Salvia bowleyana HOM05D004457 ORTHO05D005282 1.9e-104 383.3 326 61.3
SalBow2G1767 Salvia bowleyana HOM05D004457 ORTHO05D005282 4.2e-104 382.1 326 59.8
MELO3C021859.2 Cucumis melo HOM05D004457 ORTHO05D005282 5.5e-104 381.7 284 68.3
SalBow4G0893 Salvia bowleyana HOM05D004457 ORTHO05D005282 7.2e-104 381.3 326 60.7
MSTRG.26922 Avicennia marina HOM05D004457 ORTHO05D005282 1.2e-103 380.6 327 58.4
SGA_v2.0_scaffold50G18449 Striga asiatica HOM05D004457 ORTHO05D005282 1.6e-103 380.2 362 54.7
CiPaw.06G035000 Carya illinoinensis HOM05D004457 ORTHO05D005282 8.0e-103 377.9 284 68.7
MSTRG.8 Avicennia marina HOM05D004457 ORTHO05D005282 4.0e-102 375.6 326 58.3
Lj1A1034G49 Lonicera japonica HOM05D004457 ORTHO05D005282 4.0e-102 375.6 249 73.5
Peaxi162Scf00133g00612 Petunia axillaris HOM05D004457 ORTHO05D005282 1.2e-101 374.0 324 59.6
QL09p022526 Quercus lobata HOM05D004457 ORTHO05D005282 7.5e-101 371.3 277 68.6
Duzib106G1483 Durio zibethinus HOM05D004457 ORTHO05D005282 4.8e-100 368.6 324 61.1
unitig_90.g27538 Utricularia gibba HOM05D004457 ORTHO05D005282 8.3e-100 367.9 326 58.9
PSO541G4777 Papaver somniferum HOM05D004457 ORTHO05D005282 7.7e-98 361.3 363 53.4
ATR0665G122 Amborella trichopoda HOM05D004457 ORTHO05D005282 3.3e-96 355.9 324 54.0
HPP92_001524 Vanilla planifolia HOM05D004457 ORTHO05D005282 2.1e-95 353.2 324 53.4
SGA_v2.0_scaffold44G16903 Striga asiatica HOM05D004457 ORTHO05D005282 3.0e-94 349.4 346 51.7
Actinidia28413 Actinidia chinensis HOM05D004457 ORTHO05D005282 6.8e-94 348.2 234 72.6
Oeu015511.1 Olea europaea HOM05D004457 ORTHO05D005282 8.9e-94 347.8 325 55.7
FAN25G0067 Fragaria x ananassa HOM05D004457 ORTHO05D005282 2.6e-93 346.3 329 60.5
Nitab4.5_0004268g0020 Nicotiana tabacum HOM05D004457 ORTHO05D005282 7.5e-93 344.7 268 63.4
Zm00001eb024890 Zea mays HOM05D004457 ORTHO05D005282 9.8e-93 344.4 329 52.0
Cfa016063 Carpinus fangiana HOM05D004457 ORTHO05D005282 9.5e-88 327.8 325 57.5
Cfa016062 Carpinus fangiana HOM05D004457 ORTHO05D005282 9.5e-80 301.2 294 57.1
PSO675G5198 Papaver somniferum HOM05D004457 ORTHO05D005282 9.5e-80 301.2 261 59.4
FAN03G1923 Fragaria x ananassa HOM05D004457 ORTHO05D005282 1.8e-78 297.0 171 85.4
Sed0022448 Sechium edule HOM05D004457 ORTHO05D005282 2.4e-75 286.6 211 69.2
SEGI_39651 Sequoiadendron giganteum HOM05D004457 ORTHO05D005282 2.1e-74 283.5 324 46.3
CARHR056470 Cardamine hirsuta HOM05D004457 ORTHO05D005282 4.6e-74 282.3 210 69.5
Hund09804 Selenicereus undatus HOM05D004457 ORTHO05D005282 4.6e-74 282.3 308 48.7
Haze_00386 Corylus avellana HOM05D004457 ORTHO05D005282 6.6e-73 278.5 288 54.5
AUR62002084 Chenopodium quinoa HOM05D004457 ORTHO05D005282 1.4e-70 270.8 324 47.5
CDE02G1044 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 5.2e-70 268.9 247 52.2
Dinv29138 Davidia involucrata HOM05D004457 ORTHO05D005282 2.4e-62 243.4 145 82.8
ClCG09G013130 Citrullus lanatus HOM05D004457 ORTHO05D005282 6.8e-62 241.9 174 67.2
Gohir.A08G097750 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.9e-56 223.8 248 50.4
ECA233G5338 Erigeron canadensis HOM05D004457 ORTHO05D005282 1.5e-53 214.2 165 67.3
Sopen03g027920 Solanum pennellii HOM05D004457 ORTHO05D005282 2.2e-52 210.3 145 70.3
Nitab4.5_0000338g0060 Nicotiana tabacum HOM05D004457 ORTHO05D005282 4.9e-52 209.1 164 64.0
BolC4t27312H Brassica oleracea HOM05D004457 ORTHO05D005282 1.4e-46 191.0 164 62.8
Mapoly0043s0014 Marchantia polymorpha HOM05D004457 ORTHO05D005282 1.4e-46 191.0 337 38.0
ClCG09G013110 Citrullus lanatus HOM05D004457 ORTHO05D005282 2.4e-46 190.3 151 60.9
Dinv29137 Davidia involucrata HOM05D004457 ORTHO05D005282 2.6e-45 186.8 128 68.8
Pp3c11_5580 Physcomitrium patens HOM05D004457 ORTHO05D005282 2.5e-40 170.2 317 35.3
AagrBONN_evm.TU.Sc2ySwM_228.2639 Anthoceros agrestis HOM05D004457 ORTHO05D005282 9.3e-35 151.8 238 36.6
BcaC02g08145 Brassica carinata HOM05D004457 ORTHO05D005282 4.6e-34 149.4 122 63.1
SMO364G0318 Selaginella moellendorffii HOM05D004457 ORTHO05D005282 6.7e-33 145.6 211 37.4
Migut.F00937 Erythranthe guttata HOM05D004457 ORTHO05D005282 1.1e-32 144.8 151 49.7
DCAR_020421 Daucus carota HOM05D004457 ORTHO05D005282 1.9e-32 144.1 83 83.1
Pp3c10_23490 Physcomitrium patens HOM05D004457 ORTHO05D005282 5.7e-32 142.5 316 31.0
ECA233G2641 Erigeron canadensis HOM05D004457 ORTHO05D005282 4.5e-29 132.9 120 59.2
RcHm_v2.0_Chr7g0241921 Rosa chinensis HOM05D004457 ORTHO05D005282 2.9e-28 130.2 96 69.8
Sopen03g027940 Solanum pennellii HOM05D004457 ORTHO05D005282 2.7e-26 123.6 120 50.8
Nitab4.5_0000845g0010 Nicotiana tabacum HOM05D004457 ORTHO05D005282 5.7e-24 115.9 166 43.4
Medtr3g091660 Medicago truncatula HOM05D004457 ORTHO05D005282 3.1e-22 110.2 111 49.5
MELO3C003309.2 Cucumis melo HOM05D004457 ORTHO05D005282 5.9e-21 105.9 86 62.8
Gohir.A08G102425 Gossypium hirsutum HOM05D004457 ORTHO05D005282 1.7e-20 104.4 66 74.2
C07p33100 Brassica napus HOM05D004457 ORTHO05D005282 3.6e-18 96.7 75 64.0
BcaC06g34068 Brassica carinata HOM05D004457 ORTHO05D005282 7.9e-18 95.5 75 64.0
BolC9t54837H Brassica oleracea HOM05D004457 ORTHO05D005282 7.9e-18 95.5 75 64.0
CDE02G4136 Ceratophyllum demersum HOM05D004457 ORTHO05D005282 1.8e-17 94.4 77 57.1
arahy.Tifrunner.gnm1.ann1.383HND Arachis hypogaea HOM05D004457 ORTHO05D005282 9.7e-16 88.6 61 70.5
QL09p022513 Quercus lobata HOM05D004457 ORTHO05D005282 1.2e-13 81.6 58 69.0
Medtr3g091670 Medicago truncatula HOM05D004457 ORTHO05D005282 3.2e-11 73.6 61 62.3
QL03p072618 Quercus lobata HOM05D000132 ORTHO05D000058 9.4e-11 72.0 54 68.5
arahy.Tifrunner.gnm1.ann1.G80LMI Arachis hypogaea HOM05D004457 ORTHO05D082520 7.4e-08 62.4 56 57.1
Gohir.A11G267601 Gossypium hirsutum HOM05D004457 ORTHO05D005282 7.0e-06 55.8 42 57.1


User provided reference genes

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