Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G328000 Prunus persica HOM05D008311 ORTHO05D010526 4.6e-228 794.3 413 100.0
MD07G1310100 Malus domestica HOM05D008311 ORTHO05D010526 9.7e-162 573.9 382 79.6
TAR629G0038 Trochodendron aralioides HOM05D008311 ORTHO05D010526 3.3e-146 522.3 378 70.6
Cfa016060 Carpinus fangiana HOM05D008311 ORTHO05D010526 7.5e-146 521.2 378 73.5
GSVIVG01024350001 Vitis vinifera HOM05D008311 ORTHO05D010526 1.7e-142 510.0 378 71.7
Haze_00388 Corylus avellana HOM05D008311 ORTHO05D010526 5.5e-141 505.0 378 70.6
Actinidia08755 Actinidia chinensis HOM05D008311 ORTHO05D010526 2.7e-140 502.7 378 69.3
Aqoxy4G02584 Aquilegia oxysepala HOM05D008311 ORTHO05D010526 6.3e-137 491.5 378 67.5
Ciclev10020460m.g Citrus clementina HOM05D008311 ORTHO05D010526 2.2e-134 483.0 378 66.9
MBI04_g20345_MAGBIO Magnolia biondii HOM05D008311 ORTHO05D010526 2.9e-134 482.6 380 65.8
FAN10G1178 Fragaria x ananassa HOM05D008311 ORTHO05D010526 2.5e-133 479.6 378 68.5
QL09p022981 Quercus lobata HOM05D008311 ORTHO05D010526 2.5e-133 479.6 461 58.6
Thecc.05G218800 Theobroma cacao HOM05D008311 ORTHO05D010526 2.1e-132 476.5 378 65.9
Nn3g20131 Nelumbo nucifera HOM05D008311 ORTHO05D010526 6.1e-132 474.9 378 64.3
Gohir.A08G221662 Gossypium hirsutum HOM05D008311 ORTHO05D010526 6.8e-131 471.5 378 67.2
Dinv29140 Davidia involucrata HOM05D008311 ORTHO05D010526 2.6e-130 469.5 351 70.4
Manes.09G128000 Manihot esculenta HOM05D008311 ORTHO05D010526 1.1e-128 464.2 378 64.3
Sed0001927 Sechium edule HOM05D008311 ORTHO05D010526 1.8e-128 463.4 380 64.2
Gorai.004G256700 Gossypium raimondii HOM05D008311 ORTHO05D010526 3.5e-127 459.1 379 66.8
Gohir.D08G241300 Gossypium hirsutum HOM05D008311 ORTHO05D010526 1.7e-126 456.8 379 66.2
Eucgr.A02984 Eucalyptus grandis HOM05D008311 ORTHO05D010526 2.8e-124 449.5 378 62.2
Duzib128G1797 Durio zibethinus HOM05D008311 ORTHO05D010526 4.7e-124 448.7 378 65.1
CsaV3_2G036620 Cucumis sativus L. HOM05D008311 ORTHO05D010526 2.6e-122 443.0 380 62.6
Atru.chr12.1923 Acer truncatum HOM05D008311 ORTHO05D010526 1.1e-120 437.6 373 62.2
CiPaw.05G215000 Carya illinoinensis HOM05D008311 ORTHO05D010526 1.4e-120 437.2 310 72.6
CDE11G1038 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 1.9e-117 426.8 381 58.5
vmacro06529 Vaccinium macrocarpon HOM05D008311 ORTHO05D010526 6.2e-116 421.8 336 64.6
ClCG09G017160 Citrullus lanatus HOM05D008311 ORTHO05D010526 1.4e-115 420.6 380 59.7
AUR62028199 Chenopodium quinoa HOM05D008311 ORTHO05D010526 8.9e-115 417.9 383 58.7
ATR0665G332 Amborella trichopoda HOM05D008311 ORTHO05D010526 5.4e-112 408.7 389 58.1
RcHm_v2.0_Chr1g0384481 Rosa chinensis HOM05D008311 ORTHO05D010526 6.6e-110 401.7 313 70.0
AUR62002082 Chenopodium quinoa HOM05D008311 ORTHO05D010526 1.2e-108 397.5 356 60.1
COL.COLO4_15199 Corchorus olitorius HOM05D008311 ORTHO05D010526 2.1e-108 396.7 381 57.5
CDE11G1017 Ceratophyllum demersum HOM05D008311 ORTHO05D010526 2.8e-108 396.4 381 53.5
FAN03G2372 Fragaria x ananassa HOM05D008311 ORTHO05D010526 1.7e-105 387.1 395 57.7
Lsat_1_v5_gn_8_108920 Lactuca sativa HOM05D008311 ORTHO05D010526 3.5e-103 379.4 385 54.5
DCAR_020420 Daucus carota HOM05D008311 ORTHO05D010526 6.6e-102 375.2 378 54.2
HPP92_005385 Vanilla planifolia HOM05D008311 ORTHO05D010526 9.5e-101 371.3 385 51.7
Zm00001eb429910 Zea mays HOM05D008311 ORTHO05D010526 6.8e-99 365.2 384 52.3
THA.LOC104821739 Tarenaya hassleriana HOM05D008311 ORTHO05D010526 6.6e-94 348.6 342 57.0
MELO3C021863.2 Cucumis melo HOM05D008311 ORTHO05D010526 7.3e-93 345.1 293 62.1
HPP92_009011 Vanilla planifolia HOM05D008311 ORTHO05D010526 6.2e-92 342.0 385 49.4
Lj3A885T48 Lonicera japonica HOM05D008311 ORTHO05D010526 1.8e-91 340.5 391 53.5
EL10Ac3g05056 Beta vulgaris HOM05D008311 ORTHO05D010526 1.1e-88 331.3 378 51.6
Os04g0592500 Oryza sativa ssp. japonica HOM05D008311 ORTHO05D010526 6.2e-84 315.5 378 47.4
Zm00001eb201380 Zea mays HOM05D008311 ORTHO05D010526 1.0e-70 271.6 315 48.3
Pp3c16_5410 Physcomitrium patens HOM05D008311 ORTHO05D010526 5.1e-70 269.2 384 39.3
AagrBONN_evm.TU.Sc2ySwM_117.4008 Anthoceros agrestis HOM05D008311 ORTHO05D010526 2.1e-68 263.8 357 43.4
SEGI_24543 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 5.1e-62 242.7 261 50.2
Zm00001eb341760 Zea mays HOM05D008311 ORTHO05D010526 7.2e-56 222.2 251 47.4
SEGI_38800 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 2.2e-28 131.0 127 50.4
CSS0045669 Camellia sinensis var. sinensis HOM05D008311 ORTHO05D010526 8.2e-28 129.0 101 64.4
SEGI_12661 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 4.5e-26 123.2 125 56.0
Zm00001eb072300 Zea mays HOM05D008311 ORTHO05D010526 1.5e-24 118.2 179 44.7
SEGI_19325 Sequoiadendron giganteum HOM05D008311 ORTHO05D010526 9.4e-24 115.5 133 50.4
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 8.8e-14 82.4 93 48.4
Zm00001eb207330 Zea mays HOM05D008311 ORTHO05D010526 1.5e-13 81.6 133 36.8
Potri.013G079301 Populus trichocarpa HOM05D008311 ORTHO05D010526 9.8e-13 79.0 62 62.9
Dinv07670 Davidia involucrata HOM05D008311 ORTHO05D183374 1.7e-12 78.2 51 72.5
SEGI_08901 Sequoiadendron giganteum HOM05D008311 ORTHO05D384408 5.2e-06 56.6 57 49.1


User provided reference genes

Program Settings