Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 5.9e-55 217.2 105 100.0
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 7.9e-52 206.8 103 96.1
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 4.5e-47 191.0 103 86.4
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 1.3e-46 189.5 104 88.5
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 3.8e-46 188.0 103 85.4
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.8e-46 188.0 103 85.4
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 6.5e-46 187.2 103 87.4
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 8.5e-46 186.8 103 85.4
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 9.4e-45 183.3 101 88.1
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 1.6e-44 182.6 101 87.1
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 2.7e-44 181.8 103 83.5
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 2.7e-44 181.8 103 83.5
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 7.9e-44 180.3 105 81.0
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 7.9e-44 180.3 101 86.1
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 7.9e-44 180.3 101 86.1
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 1.4e-43 179.5 101 85.1
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 1.4e-43 179.5 109 80.7
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.8e-43 179.1 103 81.6
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.8e-43 179.1 103 82.5
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 3.0e-43 178.3 101 85.1
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 3.0e-43 178.3 103 84.5
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 5.1e-43 177.6 103 84.5
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 6.7e-43 177.2 103 83.5
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 1.5e-42 176.0 105 81.9
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 1.5e-42 176.0 103 82.5
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.5e-42 176.0 103 83.5
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 2.0e-42 175.6 105 81.0
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 2.0e-42 175.6 105 79.0
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 2.5e-42 175.3 101 83.2
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 4.3e-42 174.5 103 79.6
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 7.4e-42 173.7 103 78.6
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 7.4e-42 173.7 105 80.0
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 9.7e-42 173.3 103 80.6
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 9.7e-42 173.3 105 78.1
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 9.7e-42 173.3 105 80.0
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 1.3e-41 172.9 103 79.6
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 1.3e-41 172.9 112 76.8
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 2.8e-41 171.8 104 81.7
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 8.2e-41 170.2 111 75.7
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 1.1e-40 169.9 103 77.7
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.1e-40 169.9 104 78.8
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 4.1e-40 167.9 111 76.6
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 5.3e-40 167.5 102 78.4
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 5.3e-40 167.5 104 78.8
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 9.1e-40 166.8 106 76.4
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 9.1e-40 166.8 103 78.6
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 1.2e-39 166.4 104 77.9
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 2.6e-39 165.2 111 73.9
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 2.6e-39 165.2 111 73.9
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 3.4e-39 164.9 104 76.9
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.9e-39 164.1 105 77.1
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 1.0e-38 163.3 111 73.0
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 1.0e-38 163.3 111 73.0
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 1.3e-38 162.9 111 73.0
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 1.3e-38 162.9 111 73.0
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 1.7e-38 162.5 112 72.3
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 3.8e-38 161.4 109 75.2
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 1.9e-37 159.1 89 86.5
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 3.2e-37 158.3 106 76.4
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 4.2e-37 157.9 112 71.4
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 4.2e-37 157.9 108 73.1
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 4.2e-37 157.9 105 72.4
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 5.5e-37 157.5 108 75.0
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 5.5e-37 157.5 105 74.3
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 7.2e-37 157.1 105 71.4
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 1.6e-36 156.0 113 69.0
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 2.1e-36 155.6 113 69.9
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 3.6e-36 154.8 116 69.0
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 3.6e-36 154.8 101 76.2
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 3.6e-36 154.8 104 73.1
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 6.1e-36 154.1 113 68.1
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 6.1e-36 154.1 113 68.1
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 6.1e-36 154.1 88 81.8
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 6.1e-36 154.1 112 67.9
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 6.1e-36 154.1 104 71.2
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 7.9e-36 153.7 108 73.1
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 7.9e-36 153.7 110 71.8
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 1.0e-35 153.3 102 75.5
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 1.4e-35 152.9 105 73.3
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 2.3e-35 152.1 105 71.4
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 2.3e-35 152.1 105 71.4
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 3.9e-35 151.4 100 75.0
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 5.1e-35 151.0 111 67.6
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 5.1e-35 151.0 82 86.6
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 6.7e-35 150.6 112 67.9
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 1.5e-34 149.4 111 67.6
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 1.5e-34 149.4 105 70.5
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 3.3e-34 148.3 105 71.4
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.3e-34 148.3 115 65.2
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 5.7e-34 147.5 105 71.4
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 5.7e-34 147.5 116 64.7
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 7.4e-34 147.1 103 68.9
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 2.8e-33 145.2 104 70.2
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 3.7e-33 144.8 104 67.3
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 2.4e-32 142.1 105 68.6
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 3.1e-32 141.7 105 67.6
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 4.5e-31 137.9 65 95.4
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 3.8e-30 134.8 79 75.9
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.8e-30 134.8 65 93.8
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 6.5e-30 134.0 61 98.4
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 2.5e-29 132.1 65 89.2
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 2.1e-28 129.0 105 61.9
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 8.0e-28 127.1 64 89.1
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 5.2e-27 124.4 104 58.7
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 5.2e-27 124.4 100 63.0
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 1.1e-26 123.2 74 73.0
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 2.6e-26 122.1 93 65.6
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 4.4e-26 121.3 75 74.7
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.8e-25 118.6 72 70.8
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 3.7e-25 118.2 61 86.9
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 7.0e-24 114.0 63 85.7
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 2.2e-22 109.0 77 70.1
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 3.8e-22 108.2 84 73.8
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.6e-20 102.8 69 79.7
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 3.7e-17 91.7 77 59.7
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 1.2e-15 86.7 74 59.5
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 3.5e-15 85.1 69 66.7
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 8.0e-12 73.9 60 61.7
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 3.7e-09 65.1 34 76.5


User provided reference genes

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