Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 3.0e-183 645.2 358 100.0
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.6e-144 515.0 359 79.9
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 4.3e-142 508.4 359 79.4
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.8e-140 503.1 359 78.8
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 6.9e-140 501.1 359 78.6
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 4.2e-137 491.9 358 77.7
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 2.0e-131 473.0 359 76.6
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.8e-130 468.8 338 76.9
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 4.1e-124 448.7 344 73.5
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 2.6e-123 446.0 355 70.4
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 2.6e-123 446.0 356 71.6
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.9e-122 442.6 359 70.2
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 5.0e-122 441.8 361 69.5
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 1.4e-121 440.3 359 69.9
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 3.2e-121 439.1 373 73.2
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.4e-119 433.7 372 67.7
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.8e-119 433.3 360 68.9
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 8.8e-119 431.0 363 70.0
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.1e-118 430.6 361 67.6
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 3.7e-117 425.6 338 71.0
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 6.3e-117 424.9 361 67.9
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.1e-116 424.1 349 70.2
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 1.8e-116 423.3 350 68.3
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 4.1e-116 422.2 334 75.1
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 5.3e-116 421.8 356 69.7
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 3.5e-115 419.1 351 68.9
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.9e-113 413.3 362 67.4
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 8.8e-111 404.4 363 68.0
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 4.4e-110 402.1 369 65.3
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.7e-109 400.2 374 63.1
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 2.0e-107 393.3 360 63.6
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 5.9e-107 391.7 361 63.2
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 1.3e-106 390.6 350 64.3
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 1.7e-106 390.2 369 61.2
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.7e-106 390.2 360 61.7
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 2.2e-106 389.8 372 61.8
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 2.2e-106 389.8 367 62.4
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 3.2e-105 386.0 367 61.3
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 5.5e-105 385.2 389 60.2
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 7.2e-105 384.8 348 64.7
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 7.2e-105 384.8 350 63.1
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.6e-104 383.6 362 63.5
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 3.6e-104 382.5 361 61.5
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 4.7e-104 382.1 365 60.8
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 6.1e-104 381.7 349 63.3
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 6.8e-103 378.3 361 62.3
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 1.2e-102 377.5 375 61.1
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 5.7e-102 375.2 364 62.1
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 1.3e-101 374.0 364 61.8
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.3e-101 374.0 353 62.3
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.2e-101 373.2 286 72.0
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 4.8e-101 372.1 363 60.3
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 6.3e-101 371.7 363 60.3
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 6.3e-101 371.7 363 60.3
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 6.3e-101 371.7 369 61.5
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 6.3e-101 371.7 380 60.0
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 1.4e-100 370.5 357 62.2
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 2.4e-100 369.8 380 60.8
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 5.4e-100 368.6 363 60.1
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 5.9e-99 365.2 376 58.0
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 7.7e-99 364.8 408 57.6
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 1.1e-97 360.9 377 59.7
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.5e-97 360.5 297 72.1
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 3.3e-97 359.4 369 60.2
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 4.2e-97 359.0 313 67.7
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 7.2e-97 358.2 385 59.0
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.2e-96 357.5 342 66.7
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.1e-96 356.7 366 61.7
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.8e-95 353.6 373 60.6
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 8.9e-95 351.3 349 64.5
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 4.4e-94 349.0 344 60.8
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.3e-93 347.4 358 59.2
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.8e-92 343.6 379 56.2
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 2.1e-88 330.1 408 52.0
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 2.8e-88 329.7 364 55.8
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 8.0e-88 328.2 359 56.5
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 8.9e-87 324.7 364 56.9
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 8.9e-87 324.7 363 57.3
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 9.8e-86 321.2 286 63.6
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 4.9e-85 318.9 350 58.0
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 6.4e-85 318.5 352 56.2
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 9.2e-84 314.7 372 51.9
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 6.0e-83 312.0 367 53.7
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 3.3e-81 306.2 297 60.9
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 6.2e-80 302.0 404 52.0
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 5.2e-79 298.9 360 55.0
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 7.5e-78 295.0 361 50.1
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.8e-71 273.9 360 52.5
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.3e-71 273.5 375 52.0
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 2.9e-69 266.5 368 51.1
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 3.7e-69 266.2 318 53.1
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 3.2e-68 263.1 260 63.1
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 6.8e-63 245.4 345 46.7
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 8.9e-63 245.0 410 44.1
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 2.9e-61 240.0 352 49.1
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 3.5e-59 233.0 259 61.4
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 4.6e-59 232.6 299 50.8
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 6.4e-53 212.2 276 49.3
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 4.2e-52 209.5 278 49.6
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.3e-49 199.9 171 67.8
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 5.6e-49 199.1 273 46.5
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 9.0e-47 191.8 357 42.9
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 5.8e-46 189.1 181 54.1
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.4e-44 183.7 343 38.5
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 2.4e-44 183.7 194 59.3
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.9e-41 174.1 116 79.3
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.8e-40 170.2 148 59.5
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 5.1e-26 122.9 190 48.4
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.5e-22 111.3 139 54.7
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 2.9e-21 107.1 69 85.5
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 5.0e-21 106.3 172 48.3
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 1.1e-20 105.1 172 47.7
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 5.5e-20 102.8 62 87.1
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 9.7e-17 92.0 297 34.0
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 1.5e-14 84.7 300 35.0
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 5.0e-13 79.7 120 41.7
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.1e-11 74.3 62 67.7
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 4.7e-11 73.2 47 74.5
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 8.8e-10 68.9 90 52.2
TPR.G34759 Trifolium pratense HOM05D006889 ORTHO05D008614 2.4e-07 60.8 99 38.4
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 1.2e-06 58.5 68 44.1


User provided reference genes

Program Settings