Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G320100 Prunus persica HOM05D006657 ORTHO05D005964 0.0e+00 2506.9 1255 100.0
MD01G1229500 Malus domestica HOM05D006657 ORTHO05D005964 0.0e+00 1571.2 1220 68.7
MD07G1301500 Malus domestica HOM05D006657 ORTHO05D005964 0.0e+00 1570.4 1221 69.5
FvH4_7g33030 Fragaria vesca HOM05D006657 ORTHO05D005964 0.0e+00 1256.9 1311 56.5
FAN03G1526 Fragaria x ananassa HOM05D006657 ORTHO05D005964 0.0e+00 1248.0 1305 56.1
FAN10G2847 Fragaria x ananassa HOM05D006657 ORTHO05D005964 0.0e+00 1239.2 1311 56.1
FAN10G1617 Fragaria x ananassa HOM05D006657 ORTHO05D005964 0.0e+00 1210.3 1311 54.9
RcHm_v2.0_Chr1g0383041 Rosa chinensis HOM05D006657 ORTHO05D005964 0.0e+00 1190.6 1206 58.3
QL09p006779 Quercus lobata HOM05D006657 ORTHO05D005964 4.3e-229 799.3 1295 41.9
Haze_00307 Corylus avellana HOM05D006657 ORTHO05D005964 1.4e-211 741.1 1299 41.0
Cfa016147 Carpinus fangiana HOM05D006657 ORTHO05D005964 2.4e-211 740.3 1294 41.0
CiPaw.05G206100 Carya illinoinensis HOM05D006657 ORTHO05D005964 3.8e-193 679.9 1298 39.4
Potri.015G003700 Populus trichocarpa HOM05D006657 ORTHO05D005964 9.8e-173 612.1 1302 37.3
Sabra15G0002400 Salix brachista HOM05D006657 ORTHO05D005964 5.4e-171 606.3 1296 37.0
GSVIVG01038660001 Vitis vinifera HOM05D006657 ORTHO05D005964 1.6e-167 594.7 1331 35.5
CANSAT21G0900 Cannabis sativa HOM05D006657 ORTHO05D005964 2.1e-167 594.3 1292 36.0
Dinv17292 Davidia involucrata HOM05D006657 ORTHO05D005964 2.0e-165 587.8 1337 34.0
Manes.01G044100 Manihot esculenta HOM05D006657 ORTHO05D005964 6.6e-161 572.8 1286 36.1
CSS0010102 Camellia sinensis var. sinensis HOM05D006657 ORTHO05D005964 1.8e-158 564.7 1352 34.5
Actinidia34275 Actinidia chinensis HOM05D006657 ORTHO05D005964 5.7e-157 559.7 1381 33.7
Sabra12G0004100 Salix brachista HOM05D006657 ORTHO05D005964 4.1e-147 526.9 1306 34.6
Sabra12G0008600 Salix brachista HOM05D006657 ORTHO05D005964 3.1e-142 510.8 1286 34.2
Potri.012G007000 Populus trichocarpa HOM05D006657 ORTHO05D005964 9.8e-141 505.8 1276 34.2
Dinv29204 Davidia involucrata HOM05D006657 ORTHO05D005964 4.9e-140 503.4 1001 37.8
Ciclev10018632m.g Citrus clementina HOM05D006657 ORTHO05D005964 2.1e-130 471.5 1318 33.5
FAN01G2018 Fragaria x ananassa HOM05D006657 ORTHO05D005964 3.5e-130 470.7 601 48.9
Thecc.03G210000 Theobroma cacao HOM05D006657 ORTHO05D005964 5.1e-129 466.8 1294 33.0
Duzib084G0166 Durio zibethinus HOM05D006657 ORTHO05D005964 3.4e-125 454.1 1279 32.2
TAR375G0071 Trochodendron aralioides HOM05D006657 ORTHO05D005964 5.4e-123 446.8 1336 31.9
Duzib205G0597 Durio zibethinus HOM05D006657 ORTHO05D005964 1.5e-120 438.7 1031 35.8
COL.COLO4_14382 Corchorus olitorius HOM05D006657 ORTHO05D005964 1.9e-120 438.3 1108 34.7
TWI23G1261 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 3.1e-118 431.0 1282 32.2
TAR374G0213 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.7e-116 425.2 940 36.7
TWI14G0251 Tripterygium wilfordii HOM05D006657 ORTHO05D005964 7.1e-115 419.9 1300 32.2
Duzib068G0081 Durio zibethinus HOM05D006657 ORTHO05D005964 2.3e-113 414.8 1036 36.0
Atru.chr12.2479 Acer truncatum HOM05D006657 ORTHO05D005964 6.2e-103 380.2 977 33.6
Gorai.004G125800 Gossypium raimondii HOM05D006657 ORTHO05D005964 2.5e-96 358.2 1040 34.0
Gohir.D08G117100 Gossypium hirsutum HOM05D006657 ORTHO05D005964 7.4e-96 356.7 1035 33.8
vmacro10166 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 9.6e-96 356.3 988 33.1
Rhsim09G0210400 Rhododendron simsii HOM05D006657 ORTHO05D005964 1.4e-94 352.4 993 33.6
vmacro06453 Vaccinium macrocarpon HOM05D006657 ORTHO05D005964 3.4e-85 321.2 997 31.3
arahy.Tifrunner.gnm1.ann1.UMZ78C Arachis hypogaea HOM05D006657 ORTHO05D005964 6.5e-84 317.0 1033 31.3
Nn1g05264 Nelumbo nucifera HOM05D006657 ORTHO05D005964 9.7e-80 303.1 1321 27.1
arahy.Tifrunner.gnm1.ann1.UB23H3 Arachis hypogaea HOM05D006657 ORTHO05D005964 1.7e-79 302.4 1034 31.1
Rhsim03G0216600 Rhododendron simsii HOM05D006657 ORTHO05D005964 1.1e-78 299.7 1020 31.1
Lalb_Chr23g0272001 Lupinus albus HOM05D006657 ORTHO05D005964 6.5e-76 290.4 1190 30.8
CsaV3_4G008600 Cucumis sativus L. HOM05D006657 ORTHO05D005964 2.5e-75 288.5 1216 27.2
Cpa.g.sc3.164 Carica papaya HOM05D006657 ORTHO05D005964 2.0e-72 278.9 1274 27.8
Lalb_Chr11g0067471 Lupinus albus HOM05D006657 ORTHO05D005964 1.2e-69 269.6 1176 27.9
Actinidia08706 Actinidia chinensis HOM05D006657 ORTHO05D005964 2.6e-69 268.5 766 32.0
DCAR_008990 Daucus carota HOM05D006657 ORTHO05D005964 7.7e-69 266.9 1001 28.2
Glyma.04G227100 Glycine max HOM05D006657 ORTHO05D005964 1.7e-68 265.8 1118 29.9
TAR629G2606 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.1e-67 263.1 871 29.7
Sc13g0010540 Simmondsia chinensis HOM05D006657 ORTHO05D005964 4.2e-67 261.2 1288 26.9
Sed0019147 Sechium edule HOM05D006657 ORTHO05D005964 7.2e-67 260.4 1147 28.5
Lj1g0002697 Lotus japonicus HOM05D006657 ORTHO05D005964 2.7e-66 258.5 1168 28.9
DCAR_020382 Daucus carota HOM05D006657 ORTHO05D005964 6.1e-66 257.3 1000 29.4
Glyma.06G138000 Glycine max HOM05D006657 ORTHO05D005964 3.0e-65 255.0 1142 28.4
Oeu055400.1 Olea europaea HOM05D006657 ORTHO05D005964 8.8e-65 253.4 1013 30.1
Ca_16789_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 1.3e-63 249.6 1165 28.0
Ca_16805_v3 Cicer arietinum L. HOM05D006657 ORTHO05D005964 1.3e-63 249.6 1165 28.0
Medtr3g093000 Medicago truncatula HOM05D006657 ORTHO05D005964 1.7e-63 249.2 1154 27.8
Cc07_g20200 Coffea canephora HOM05D006657 ORTHO05D005964 9.1e-62 243.4 1018 28.4
Gohir.A08G105800 Gossypium hirsutum HOM05D006657 ORTHO05D005964 8.5e-60 236.9 837 30.7
Lj1A1029T62 Lonicera japonica HOM05D006657 ORTHO05D005964 4.2e-59 234.6 483 37.3
CiPaw.06G040100 Carya illinoinensis HOM05D006657 ORTHO05D005964 9.4e-59 233.4 587 34.4
Migut.F00140 Erythranthe guttata HOM05D006657 ORTHO05D005964 1.6e-58 232.6 982 28.9
TPR.G33400 Trifolium pratense HOM05D006657 ORTHO05D005964 4.8e-55 221.1 1227 26.7
PGSC0003DMG400000558 Solanum tuberosum HOM05D006657 ORTHO05D005964 6.3e-55 220.7 974 27.8
Solyc03g080140.3 Solanum lycopersicum HOM05D006657 ORTHO05D005964 1.8e-54 219.2 990 27.6
CAN.G303.40 Capsicum annuum HOM05D006657 ORTHO05D005964 1.6e-53 216.1 987 27.3
Sopen03g021870 Solanum pennellii HOM05D006657 ORTHO05D005964 2.0e-53 215.7 977 28.1
Psat5g071280 Pisum sativum HOM05D006657 ORTHO05D005964 2.7e-53 215.3 752 29.9
SalBow4G2342 Salvia bowleyana HOM05D006657 ORTHO05D005964 6.5e-52 210.7 998 29.7
Peaxi162Scf00912g00114 Petunia axillaris HOM05D006657 ORTHO05D005964 1.1e-51 209.9 1033 27.9
SalBow4G2934 Salvia bowleyana HOM05D006657 ORTHO05D005964 3.6e-50 204.9 1000 29.3
Nitab4.5_0000021g0080 Nicotiana tabacum HOM05D006657 ORTHO05D005964 6.1e-50 204.1 1013 28.0
AUR62005972 Chenopodium quinoa HOM05D006657 ORTHO05D005964 8.0e-50 203.8 1200 27.1
VMungo1309G0886 Vigna mungo HOM05D006657 ORTHO05D005964 8.0e-50 203.8 1213 26.6
Nitab4.5_0006821g0010 Nicotiana tabacum HOM05D006657 ORTHO05D005964 1.4e-49 203.0 1030 27.5
SGA_v2.0_scaffold44G16853 Striga asiatica HOM05D006657 ORTHO05D005964 4.1e-46 191.4 1098 26.0
MSTRG.26967 Avicennia marina HOM05D006657 ORTHO05D005964 3.5e-45 188.3 1038 27.2
Phvul.009G038600 Phaseolus vulgaris HOM05D006657 ORTHO05D005964 5.9e-45 187.6 1355 25.2
AUR62028098 Chenopodium quinoa HOM05D006657 ORTHO05D005964 7.8e-45 187.2 1307 26.1
EL10Ac3g05155 Beta vulgaris HOM05D006657 ORTHO05D005964 1.7e-44 186.0 1374 25.4
PGR042G1854 Punica granatum HOM05D006657 ORTHO05D005964 7.3e-43 180.6 1124 25.0
Eucgr.K00044 Eucalyptus grandis HOM05D006657 ORTHO05D005964 2.1e-42 179.1 622 29.1
PSO170G0737 Papaver somniferum HOM05D006657 ORTHO05D005964 1.3e-39 169.9 1375 25.1
TAR629G3494 Trochodendron aralioides HOM05D006657 ORTHO05D005964 1.7e-39 169.5 476 31.1
PSO782G1897 Papaver somniferum HOM05D006657 ORTHO05D005964 4.1e-38 164.9 1382 24.5
Hund23980 Selenicereus undatus HOM05D006657 ORTHO05D005964 1.0e-36 160.2 1384 24.9
Ah.13g070870 Amaranthus hybridus HOM05D006657 ORTHO05D005964 3.9e-36 158.3 1167 25.8
Aqoxy5G04358 Aquilegia oxysepala HOM05D006657 ORTHO05D005964 1.9e-35 156.0 1032 25.5
CiPaw.06G039800 Carya illinoinensis HOM05D006657 ORTHO05D005964 1.5e-32 146.4 179 49.2
SGA_v2.0_scaffold18G08476 Striga asiatica HOM05D006657 ORTHO05D005964 5.8e-32 144.4 981 26.5
MBI04_g37612_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 7.8e-29 134.0 1077 25.3
Lsat_1_v5_gn_2_134840 Lactuca sativa HOM05D006657 ORTHO05D005964 6.6e-28 131.0 873 25.3
QL02p027097 Quercus lobata HOM05D013249 ORTHO05D011012 1.4e-25 123.2 783 23.6
Ah.07g204540 Amaranthus hybridus HOM05D006657 ORTHO05D005964 4.4e-24 118.2 1202 23.4
MBI12_g20086_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 5.8e-24 117.9 1427 22.6
Atru.chr12.2480 Acer truncatum HOM05D006657 ORTHO05D005964 2.4e-22 112.5 283 37.5
ECA233G2144 Erigeron canadensis HOM05D006657 ORTHO05D005964 2.4e-22 112.5 382 31.2
CDE02G0079 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 6.0e-21 107.8 1134 22.4
Eucgr.K00452 Eucalyptus grandis HOM05D006657 ORTHO05D005964 7.8e-21 107.5 362 29.0
HanXRQChr08g0226001 Helianthus annuus HOM05D006657 ORTHO05D005964 3.0e-20 105.5 366 32.0
Cpa.g.sc9.388 Carica papaya HOM05D006657 ORTHO05D005964 5.1e-20 104.8 235 37.4
Potri.001G452300 Populus trichocarpa HOM05D011672 ORTHO05D011012 5.1e-20 104.8 433 28.4
Oeu029332.2 Olea europaea HOM05D006657 ORTHO05D005964 3.3e-19 102.1 515 27.4
MBI04_g41177_MAGBIO Magnolia biondii HOM05D006657 ORTHO05D005964 7.3e-19 100.9 582 26.1
THA.LOC104799674 Tarenaya hassleriana HOM05D009821 ORTHO05D005964 9.5e-19 100.5 404 28.0
Sabra16G0305400 Salix brachista HOM05D011672 ORTHO05D011012 1.2e-18 100.1 414 27.8
Eucgr.A00967 Eucalyptus grandis HOM05D006657 ORTHO05D005964 6.2e-18 97.8 551 25.4
CiPaw.12G074500 Carya illinoinensis HOM05D011672 ORTHO05D011012 4.0e-17 95.1 307 29.6
Aa31LG11G3790 Aethionema arabicum HOM05D009821 ORTHO05D005964 8.9e-17 94.0 188 35.6
Cc00_g14340 Coffea canephora HOM05D006657 ORTHO05D005964 2.2e-15 89.4 141 41.1
BcaC01g02410 Brassica carinata HOM05D009821 ORTHO05D005964 8.4e-15 87.4 194 34.5
A01p24720 Brassica napus HOM05D009821 ORTHO05D005964 8.4e-15 87.4 323 30.3
C03p65560 Brassica napus HOM05D009821 ORTHO05D005964 8.4e-15 87.4 194 34.5
BolC3t18811H Brassica oleracea HOM05D009821 ORTHO05D005964 8.4e-15 87.4 194 34.5
BraA01t02384Z Brassica rapa HOM05D009821 ORTHO05D005964 8.4e-15 87.4 323 30.3
AL5G29280 Arabidopsis lyrata HOM05D009821 ORTHO05D005964 5.4e-14 84.7 198 33.8
CDE04G2546 Ceratophyllum demersum HOM05D006657 ORTHO05D005964 5.4e-14 84.7 616 24.0
unitig_0.g2439 Utricularia gibba HOM05D006657 ORTHO05D005964 1.6e-13 83.2 296 28.0
AT3G49490 Arabidopsis thaliana HOM05D009821 ORTHO05D005964 3.5e-13 82.0 209 30.6
BcaB05g23119 Brassica carinata HOM05D009821 ORTHO05D005964 1.7e-12 79.7 492 24.6
ATR0579G071 Amborella trichopoda HOM05D006657 ORTHO05D005964 2.3e-12 79.3 1027 21.7
C08p24510 Brassica napus HOM05D009821 ORTHO05D005964 3.9e-12 78.6 334 27.2
BolC8t50069H Brassica oleracea HOM05D009821 ORTHO05D005964 3.9e-12 78.6 334 27.2
TWI81G0792 Tripterygium wilfordii HOM05D011672 ORTHO05D011012 6.6e-12 77.8 434 26.7
CARHR158490 Cardamine hirsuta HOM05D009821 ORTHO05D005964 8.6e-12 77.4 521 26.3
Haze_09217 Corylus avellana HOM05D013249 ORTHO05D011012 1.1e-11 77.0 983 23.3
Carub.0005s1582 Capsella rubella HOM05D009821 ORTHO05D005964 1.5e-11 76.6 201 31.8
BcaC07g39413 Brassica carinata HOM05D009821 ORTHO05D005964 1.9e-11 76.3 334 27.2
BcaB02g09591 Brassica carinata HOM05D009821 ORTHO05D005964 2.5e-11 75.9 199 32.2
A06p28240 Brassica napus HOM05D009821 ORTHO05D005964 3.3e-11 75.5 319 27.9
BraA06t25767Z Brassica rapa HOM05D009821 ORTHO05D005964 3.3e-11 75.5 319 27.9
Sp5g12600 Schrenkiella parvula HOM05D009821 ORTHO05D005964 4.3e-11 75.1 775 23.9
A06p18270 Brassica napus HOM05D009821 ORTHO05D005964 5.6e-11 74.7 331 28.4
BraA06t24910Z Brassica rapa HOM05D009821 ORTHO05D005964 5.6e-11 74.7 331 28.4
MELO3C024862.2 Cucumis melo HOM05D006657 ORTHO05D005964 1.2e-10 73.6 269 30.1
Lj1P1029T48 Lonicera japonica HOM05D006657 ORTHO05D005964 4.7e-10 71.6 131 33.6
Cpa.g.sc37.109 Carica papaya HOM05D011672 ORTHO05D012736 8.1e-10 70.9 205 29.3
BcaB01g00702 Brassica carinata HOM05D009821 ORTHO05D005964 2.4e-09 69.3 328 25.6
MD06G1124500 Malus domestica HOM05D013249 ORTHO05D011012 3.1e-09 68.9 240 26.2
C01p30840 Brassica napus HOM05D009821 ORTHO05D005964 8.9e-09 67.4 325 26.2
BcaC09g49952 Brassica carinata HOM05D009821 ORTHO05D005964 1.7e-07 63.2 323 26.6
BolC1t03016H Brassica oleracea HOM05D009821 ORTHO05D005964 4.9e-07 61.6 328 25.9
FAN13G1375 Fragaria x ananassa HOM05D013249 ORTHO05D011012 1.9e-06 59.7 196 27.0
Potri.002G230100 Populus trichocarpa HOM05D006657 ORTHO05D005964 1.9e-06 59.7 61 52.5
Prupe.5G135100 Prunus persica HOM05D013249 ORTHO05D011012 3.2e-06 58.9 199 27.1
Thecc.03G215600 Theobroma cacao HOM05D011672 ORTHO05D011012 4.2e-06 58.5 251 25.1
Duzib068G0278 Durio zibethinus HOM05D011672 ORTHO05D011012 5.4e-06 58.2 181 27.6
FAN04G0229 Fragaria x ananassa HOM05D013249 ORTHO05D011012 5.4e-06 58.2 179 30.2
Potri.003G206701 Populus trichocarpa HOM05D006657 ORTHO05D005964 5.4e-06 58.2 61 49.2


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