Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G319200 Prunus persica HOM05D000341 ORTHO05D000557 1.5e-91 339.3 159 100.0
Prupe.2G319300 Prunus persica HOM05D000341 ORTHO05D000557 2.4e-44 182.6 171 58.5
Prupe.2G319400 Prunus persica HOM05D000341 ORTHO05D000557 4.9e-37 158.3 174 54.6
MD01G1228600 Malus domestica HOM05D000341 ORTHO05D000557 2.2e-29 132.9 173 47.4
MD07G1299600 Malus domestica HOM05D000341 ORTHO05D000557 2.1e-27 126.3 172 44.8
RcHm_v2.0_Chr1g0382911 Rosa chinensis HOM05D000341 ORTHO05D008453 3.9e-18 95.5 171 36.8
RcHm_v2.0_Chr1g0382921 Rosa chinensis HOM05D000341 ORTHO05D008453 3.3e-17 92.4 184 39.7
CiPaw.05G205600 Carya illinoinensis HOM05D000341 ORTHO05D000557 2.1e-16 89.7 127 40.2
Duzib068G0987 Durio zibethinus HOM05D000341 ORTHO05D000557 4.8e-16 88.6 131 39.7
Thecc.03G209200 Theobroma cacao HOM05D000341 ORTHO05D000557 1.1e-15 87.4 131 38.9
FAN03G2045 Fragaria x ananassa HOM05D000341 ORTHO05D008453 1.4e-15 87.0 166 39.2
Cfa016157 Carpinus fangiana HOM05D000341 ORTHO05D000557 1.8e-15 86.7 132 39.4
FAN01G1816 Fragaria x ananassa HOM05D023529 ORTHO05D000557 3.1e-15 85.9 155 41.3
FAN10G0769 Fragaria x ananassa HOM05D023529 ORTHO05D000557 6.9e-15 84.7 150 40.0
CiPaw.05G205400 Carya illinoinensis HOM05D000341 ORTHO05D000557 1.2e-14 84.0 127 40.9
COL.COLO4_35276 Corchorus olitorius HOM05D000341 ORTHO05D008453 2.0e-14 83.2 144 38.2
QL08p047409 Quercus lobata HOM05D000341 ORTHO05D000557 2.6e-14 82.8 129 34.1
COL.COLO4_14374 Corchorus olitorius HOM05D000341 ORTHO05D008453 3.4e-14 82.4 125 38.4
FvH4_7g32960 Fragaria vesca HOM05D000341 ORTHO05D008453 3.4e-14 82.4 136 41.9
CSS0006475 Camellia sinensis var. sinensis HOM05D000341 ORTHO05D008453 1.3e-13 80.5 119 38.7
CiPaw.05G205500 Carya illinoinensis HOM05D000341 ORTHO05D000557 3.8e-13 79.0 127 41.7
CiPaw.05G205700 Carya illinoinensis HOM05D000341 ORTHO05D000557 3.8e-13 79.0 127 40.2
QL09p007150 Quercus lobata HOM05D000341 ORTHO05D000557 6.4e-13 78.2 127 36.2
FvH4_7g32950 Fragaria vesca HOM05D023529 ORTHO05D008453 1.1e-12 77.4 170 35.9
TAR629G0661 Trochodendron aralioides HOM05D000341 ORTHO05D000557 1.4e-12 77.0 145 34.5
QL09p007154 Quercus lobata HOM05D000341 ORTHO05D000557 1.9e-12 76.6 127 36.2
vmacro10161 Vaccinium macrocarpon HOM05D000341 ORTHO05D000557 2.4e-12 76.3 122 34.4
Rhsim03G0215800 Rhododendron simsii HOM05D000341 ORTHO05D008453 4.2e-12 75.5 134 38.1
Dinv35383 Davidia involucrata HOM05D005840 ORTHO05D007144 2.7e-11 72.8 137 32.8
Rhsim13G0176100 Rhododendron simsii HOM05D000341 ORTHO05D000557 4.6e-11 72.0 134 35.1
Rhsim09G0209800 Rhododendron simsii HOM05D000341 ORTHO05D000557 6.0e-11 71.6 123 33.3
Hma1.2p1_0377F.1_g139490 Hydrangea macrophylla HOM05D000341 ORTHO05D000557 7.9e-11 71.2 93 37.6
COL.COLO4_10837 Corchorus olitorius HOM05D000341 ORTHO05D000557 1.3e-10 70.5 93 35.5
PSO384G2939 Papaver somniferum HOM05D000341 ORTHO05D008453 1.3e-10 70.5 142 31.7
Rhsim13G0176000 Rhododendron simsii HOM05D000341 ORTHO05D000557 1.7e-10 70.1 134 34.3
MBI12_g07474_MAGBIO Magnolia biondii HOM05D000341 ORTHO05D000557 2.3e-10 69.7 112 33.0
CANSAT21G0420 Cannabis sativa HOM05D000341 ORTHO05D008453 3.0e-10 69.3 130 33.8
Duzib205G1658 Durio zibethinus HOM05D000341 ORTHO05D000557 3.0e-10 69.3 93 37.6
SGA_v2.0_scaffold36G14257 Striga asiatica HOM05D000341 ORTHO05D000557 3.0e-10 69.3 96 39.6
Duzib084G1302 Durio zibethinus HOM05D000341 ORTHO05D000557 3.9e-10 68.9 126 34.9
MD07G1299400 Malus domestica HOM05D000341 ORTHO05D008453 3.9e-10 68.9 75 46.7
MD07G1299500 Malus domestica HOM05D000341 ORTHO05D008453 3.9e-10 68.9 75 46.7
Thecc.03G216800 Theobroma cacao HOM05D000341 ORTHO05D000557 3.9e-10 68.9 93 39.8
MSTRG.12221 Avicennia marina HOM05D000341 ORTHO05D000557 8.7e-10 67.8 149 28.9
Rhsim02G0254200 Rhododendron simsii HOM05D000341 ORTHO05D000557 8.7e-10 67.8 102 39.2
PSO135G0668 Papaver somniferum HOM05D000341 ORTHO05D008453 1.1e-09 67.4 146 30.1
Haze_00301 Corylus avellana HOM05D000341 ORTHO05D000557 1.5e-09 67.0 118 39.0
Eucgr.A01401 Eucalyptus grandis HOM05D000341 ORTHO05D000557 2.5e-09 66.2 111 35.1
Migut.A01066 Erythranthe guttata HOM05D000341 ORTHO05D000557 4.3e-09 65.5 136 33.8
Nn3g18787 Nelumbo nucifera HOM05D000341 ORTHO05D000557 4.3e-09 65.5 152 32.2
Atru.chr9.1844 Acer truncatum HOM05D000341 ORTHO05D000557 5.6e-09 65.1 133 31.6
Oeu023692.1 Olea europaea HOM05D000341 ORTHO05D008453 5.6e-09 65.1 122 34.4
Cc02_g00790 Coffea canephora HOM05D000341 ORTHO05D008453 7.3e-09 64.7 132 33.3
Duzib138G1620 Durio zibethinus HOM05D000341 ORTHO05D000557 7.3e-09 64.7 128 32.8
MSTRG.13698 Avicennia marina HOM05D000341 ORTHO05D000557 1.3e-08 63.9 131 29.8
Haze_09207 Corylus avellana HOM05D000341 ORTHO05D000557 1.3e-08 63.9 133 32.3
Hma1.2p1_0198F.1_g085290 Hydrangea macrophylla HOM05D000341 ORTHO05D000557 1.3e-08 63.9 120 31.7
ATR0661G501 Amborella trichopoda HOM05D000341 ORTHO05D000557 2.1e-08 63.2 113 34.5
HanXRQChr03g0085901 Helianthus annuus HOM05D000341 ORTHO05D000557 2.8e-08 62.8 99 38.4
Manes.01G000527 Manihot esculenta HOM05D000341 ORTHO05D000557 2.8e-08 62.8 96 34.4
Prupe.5G134100 Prunus persica HOM05D000341 ORTHO05D000557 2.8e-08 62.8 154 26.6
CDE12G0578 Ceratophyllum demersum HOM05D001874 ORTHO05D002166 4.8e-08 62.0 115 33.9
MD06G1123000 Malus domestica HOM05D000341 ORTHO05D000557 4.8e-08 62.0 91 34.1
CDE04G3673 Ceratophyllum demersum HOM05D001874 ORTHO05D002166 6.2e-08 61.6 113 31.9
Oeu023691.1 Olea europaea HOM05D000341 ORTHO05D008453 1.8e-07 60.1 57 43.9
Potri.011G150800 Populus trichocarpa HOM05D000341 ORTHO05D000557 1.8e-07 60.1 121 31.4
Sabra11G0135400 Salix brachista HOM05D000341 ORTHO05D000557 1.8e-07 60.1 148 29.7
Sabra11G0149700 Salix brachista HOM05D000341 ORTHO05D000557 1.8e-07 60.1 148 29.7
Hma1.2p1_0198F.1_g085280 Hydrangea macrophylla HOM05D000341 ORTHO05D000557 2.4e-07 59.7 88 37.5
MD14G1139500 Malus domestica HOM05D000341 ORTHO05D000557 2.4e-07 59.7 119 26.9
Haze_19254 Corylus avellana HOM05D000341 ORTHO05D000557 3.1e-07 59.3 133 30.8
MBI04_g09607_MAGBIO Magnolia biondii HOM05D000341 ORTHO05D000557 3.1e-07 59.3 111 30.6
Thecc.01G332800 Theobroma cacao HOM05D000341 ORTHO05D000557 3.1e-07 59.3 130 30.8
Migut.F00984 Erythranthe guttata HOM05D000341 ORTHO05D000557 4.0e-07 58.9 139 31.7
Oeu023693.1 Olea europaea HOM05D000341 ORTHO05D008453 4.0e-07 58.9 67 40.3
Gorai.006G204400 Gossypium raimondii HOM05D000341 ORTHO05D000557 5.3e-07 58.5 89 36.0
HanXRQChr13g0415701 Helianthus annuus HOM05D000341 ORTHO05D000557 5.3e-07 58.5 92 29.3
Lsat_1_v5_gn_6_82980 Lactuca sativa HOM05D000341 ORTHO05D000557 5.3e-07 58.5 92 32.6
MD06G1122600 Malus domestica HOM05D000341 ORTHO05D000557 5.3e-07 58.5 116 30.2
PGR042G1261 Punica granatum HOM05D000341 ORTHO05D000557 5.3e-07 58.5 117 30.8
QL11p008227 Quercus lobata HOM05D000341 ORTHO05D000557 5.3e-07 58.5 94 30.9
QL11p008548 Quercus lobata HOM05D000341 ORTHO05D000557 5.3e-07 58.5 94 30.9
MD06G1123400 Malus domestica HOM05D000341 ORTHO05D000557 6.9e-07 58.2 137 27.0
Os08g0157400 Oryza sativa ssp. japonica HOM05D000341 ORTHO05D000557 6.9e-07 58.2 106 30.2
QL11p014538 Quercus lobata HOM05D000341 ORTHO05D000557 6.9e-07 58.2 94 30.9
SEGI_09453 Sequoiadendron giganteum HOM05D000341 ORTHO05D000557 6.9e-07 58.2 128 31.2
Gohir.A09G187500 Gossypium hirsutum HOM05D000341 ORTHO05D000557 9.0e-07 57.8 98 33.7
Cfa011893 Carpinus fangiana HOM05D000341 ORTHO05D000557 1.2e-06 57.4 123 30.1
Nn3g21076 Nelumbo nucifera HOM05D000341 ORTHO05D000557 1.2e-06 57.4 127 29.9
Potri.001G450700 Populus trichocarpa HOM05D000341 ORTHO05D000557 1.2e-06 57.4 129 30.2
Gohir.A12G117000 Gossypium hirsutum HOM05D000341 ORTHO05D008453 1.5e-06 57.0 155 30.3
Actinidia22226 Actinidia chinensis HOM05D000341 ORTHO05D000557 2.0e-06 56.6 89 34.8
Gohir.D12G120540 Gossypium hirsutum HOM05D000341 ORTHO05D000557 2.0e-06 56.6 166 30.1
Sabra16G0304400 Salix brachista HOM05D000341 ORTHO05D000557 2.0e-06 56.6 91 30.8
Haze_18814 Corylus avellana HOM05D000341 ORTHO05D000557 2.6e-06 56.2 133 28.6
Gorai.008G131400 Gossypium raimondii HOM05D000341 ORTHO05D008453 2.6e-06 56.2 166 30.7
Zm00001eb250730 Zea mays HOM05D000341 ORTHO05D000557 3.4e-06 55.8 83 33.7
HanXRQChr13g0415691 Helianthus annuus HOM05D000341 ORTHO05D000557 5.8e-06 55.1 92 28.3
CiPaw.11G109500 Carya illinoinensis HOM05D000341 ORTHO05D000557 7.6e-06 54.7 126 29.4
Zm00001eb187340 Zea mays HOM05D000341 ORTHO05D000557 7.6e-06 54.7 87 32.2


User provided reference genes

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