Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.9e-114 416.0 227 100.0
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.2e-70 268.1 213 71.8
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 1.1e-69 267.3 213 71.4
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.1e-69 267.3 213 71.4
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.4e-69 266.2 213 71.4
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.4e-69 266.2 213 70.9
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 2.4e-69 266.2 217 73.3
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 3.1e-69 265.8 216 67.1
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.9e-69 264.6 213 70.9
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 8.5e-51 204.5 143 73.4
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 1.9e-50 203.4 143 73.4
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 4.7e-49 198.7 214 53.3
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 1.5e-47 193.7 127 70.9
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 2.0e-47 193.4 127 70.1
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 2.6e-47 193.0 127 71.7
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 2.6e-47 193.0 127 70.9
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 2.2e-46 189.9 127 70.9
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 1.2e-44 184.1 149 69.8
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 1.5e-44 183.7 125 73.6
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 2.6e-44 183.0 126 73.0
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 3.5e-44 182.6 134 70.1
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 3.8e-43 179.1 126 71.4
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 1.9e-42 176.8 141 64.5
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 3.2e-42 176.0 230 49.1
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 3.2e-42 176.0 127 66.1
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 1.2e-41 174.1 127 67.7
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.6e-41 173.7 135 64.4
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.6e-41 173.7 140 67.1
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 3.6e-41 172.6 125 68.8
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.8e-40 170.2 127 69.3
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 4.0e-40 169.1 157 66.9
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 5.2e-40 168.7 132 65.9
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 5.2e-40 168.7 183 53.0
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 1.5e-39 167.2 123 69.9
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 3.3e-39 166.0 122 70.5
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.7e-39 165.2 142 61.3
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 9.7e-39 164.5 138 60.9
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 9.7e-39 164.5 141 61.0
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 9.7e-39 164.5 126 69.0
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 1.3e-38 164.1 138 65.2
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.2e-38 163.3 123 66.7
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 2.2e-38 163.3 123 66.7
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 2.2e-38 163.3 134 61.9
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 2.2e-38 163.3 124 64.5
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 2.2e-38 163.3 142 63.4
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 2.8e-38 162.9 129 65.1
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 2.8e-38 162.9 123 66.7
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 2.8e-38 162.9 123 67.5
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 3.7e-38 162.5 128 62.5
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 3.7e-38 162.5 130 63.8
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 3.7e-38 162.5 130 64.6
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 6.3e-38 161.8 130 65.4
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 8.2e-38 161.4 141 61.7
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.4e-37 160.6 129 62.8
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 4.1e-37 159.1 142 59.2
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 5.3e-37 158.7 145 60.0
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 9.1e-37 157.9 142 59.2
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 9.1e-37 157.9 126 65.9
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 1.2e-36 157.5 143 60.1
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 1.6e-36 157.1 131 58.0
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 1.6e-36 157.1 135 61.5
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 2.0e-36 156.8 132 63.6
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 2.6e-36 156.4 122 63.1
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 5.9e-36 155.2 128 61.7
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 2.2e-35 153.3 123 59.3
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 2.9e-35 152.9 132 65.2
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 3.8e-35 152.5 137 59.9
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 3.8e-35 152.5 127 62.2
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 3.8e-35 152.5 127 62.2
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 3.8e-35 152.5 151 55.6
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 8.5e-35 151.4 127 61.4
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 1.1e-34 151.0 127 60.6
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 1.9e-34 150.2 127 58.3
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 4.2e-34 149.1 128 62.5
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 5.5e-34 148.7 127 60.6
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 7.2e-34 148.3 137 53.3
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 9.4e-34 147.9 127 60.6
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.6e-33 147.1 126 64.3
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 2.7e-33 146.4 127 61.4
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 3.6e-33 146.0 127 61.4
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 3.6e-33 146.0 125 56.0
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 3.6e-33 146.0 140 57.9
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 6.1e-33 145.2 123 56.9
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 1.0e-32 144.4 127 60.6
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 1.0e-32 144.4 127 60.6
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 1.4e-32 144.1 127 60.6
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.4e-32 144.1 145 56.6
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 3.0e-32 142.9 117 62.4
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 4.0e-32 142.5 127 59.8
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 4.0e-32 142.5 129 58.9
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 3.4e-31 139.4 122 60.7
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 1.3e-30 137.5 127 56.7
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 1.3e-30 137.5 126 54.0
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 1.3e-30 137.5 123 57.7
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 2.8e-30 136.3 141 53.9
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 6.3e-30 135.2 142 52.8
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 8.3e-30 134.8 146 52.7
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.8e-27 125.9 131 50.4
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.5e-26 124.0 87 73.6
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 1.9e-26 123.6 140 48.6
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 7.2e-26 121.7 124 51.6
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 9.4e-26 121.3 128 52.3
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 2.6e-23 113.2 76 69.7
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 5.7e-23 112.1 107 52.3
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.7e-22 110.5 115 45.2
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 2.2e-22 110.2 118 47.5
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.1e-21 107.8 130 47.7
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.1e-21 107.8 71 71.8
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 4.1e-21 105.9 123 49.6
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 7.0e-21 105.1 132 43.9
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.6e-20 104.0 123 47.2
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 7.2e-18 95.1 78 64.1
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 3.0e-11 73.2 46 71.7
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.2e-07 61.2 61 60.7
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.8e-07 58.9 65 52.3
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 1.7e-06 57.4 64 53.1
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 2.2e-06 57.0 42 71.4
SEGI_09763 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 4.9e-06 55.8 64 51.6
SEGI_10524 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 6.4e-06 55.5 66 48.5


User provided reference genes

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