Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G302400 Prunus persica HOM05D006127 ORTHO05D007465 3.7e-312 1074.7 540 100.0
MD07G1280200 Malus domestica HOM05D006127 ORTHO05D007465 1.0e-264 916.4 549 86.5
MD01G1210100 Malus domestica HOM05D006127 ORTHO05D007465 2.1e-233 812.4 441 90.7
Cfa016302 Carpinus fangiana HOM05D006127 ORTHO05D007465 5.4e-221 771.2 547 74.0
QL09p012458 Quercus lobata HOM05D006127 ORTHO05D007465 6.2e-217 757.7 555 73.0
COL.COLO4_30292 Corchorus olitorius HOM05D006127 ORTHO05D007465 8.1e-217 757.3 556 72.3
RcHm_v2.0_Chr1g0378611 Rosa chinensis HOM05D006127 ORTHO05D007465 8.1e-217 757.3 499 78.0
Thecc.03G186000 Theobroma cacao HOM05D006127 ORTHO05D007465 8.1e-217 757.3 555 72.4
FAN06G3350 Fragaria x ananassa HOM05D006127 ORTHO05D007465 7.6e-215 750.7 535 74.2
FAN10G0315 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.7e-214 749.6 535 74.2
FAN10G2357 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.2e-214 749.2 535 74.4
Gorai.003G069400 Gossypium raimondii HOM05D006127 ORTHO05D007465 1.1e-213 746.9 555 71.9
FAN06G1782 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.9e-213 746.1 535 73.8
Gohir.D11G229300 Gossypium hirsutum HOM05D006127 ORTHO05D007465 2.7e-212 742.3 555 71.5
FAN03G2078 Fragaria x ananassa HOM05D006127 ORTHO05D007465 2.3e-211 739.2 538 72.5
FAN03G3352 Fragaria x ananassa HOM05D006127 ORTHO05D007465 8.6e-211 737.3 538 72.1
Gohir.A11G225200 Gossypium hirsutum HOM05D006127 ORTHO05D007465 9.6e-210 733.8 553 70.5
CiPaw.06G004100 Carya illinoinensis HOM05D006127 ORTHO05D007465 1.6e-209 733.0 539 72.0
Manes.06G153500 Manihot esculenta HOM05D006127 ORTHO05D007465 3.6e-209 731.9 564 70.6
Sabra17G0124200 Salix brachista HOM05D006127 ORTHO05D007465 7.6e-207 724.2 561 68.4
Atru.chr1.338 Acer truncatum HOM05D006127 ORTHO05D007465 1.3e-206 723.4 534 70.6
Ciclev10004691m.g Citrus clementina HOM05D006127 ORTHO05D007465 2.2e-206 722.6 550 69.1
Dinv35267 Davidia involucrata HOM05D006127 ORTHO05D007465 2.9e-206 722.2 556 68.5
Potri.017G148900 Populus trichocarpa HOM05D006127 ORTHO05D007465 8.4e-206 720.7 556 68.5
TWI23G0320 Tripterygium wilfordii HOM05D006127 ORTHO05D007465 1.4e-200 703.4 562 68.1
CSS0002355 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 1.3e-198 696.8 552 68.3
Haze_00059 Corylus avellana HOM05D006127 ORTHO05D007465 6.0e-196 688.0 547 68.9
CSS0021566 Camellia sinensis var. sinensis HOM05D006127 ORTHO05D007465 7.9e-196 687.6 556 67.6
CiPaw.05G261300 Carya illinoinensis HOM05D006127 ORTHO05D007465 2.3e-195 686.0 433 78.5
Potri.004G072100 Populus trichocarpa HOM05D006127 ORTHO05D007465 4.3e-194 681.8 512 70.7
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 1.6e-193 679.9 572 67.0
CsaV3_5G001020 Cucumis sativus L. HOM05D006127 ORTHO05D007465 2.1e-193 679.5 548 64.6
Nitab4.5_0000472g0230 Nicotiana tabacum HOM05D006127 ORTHO05D007465 2.1e-193 679.5 463 76.2
TAR374G0777 Trochodendron aralioides HOM05D006127 ORTHO05D007465 3.1e-192 675.6 471 73.2
Lj2g0027649 Lotus japonicus HOM05D006127 ORTHO05D007465 5.3e-192 674.9 546 66.1
ClCG01G000890 Citrullus lanatus HOM05D006127 ORTHO05D007465 9.0e-192 674.1 547 65.1
Eucgr.A02719 Eucalyptus grandis HOM05D006127 ORTHO05D007465 3.4e-191 672.2 566 64.5
PGSC0003DMG400009503 Solanum tuberosum HOM05D006127 ORTHO05D007465 1.7e-190 669.8 463 75.2
PGR044G2596 Punica granatum HOM05D006127 ORTHO05D007465 2.2e-190 669.5 554 65.9
Solyc03g007620.3 Solanum lycopersicum HOM05D006127 ORTHO05D007465 4.2e-189 665.2 463 74.3
MELO3C005842.2 Cucumis melo HOM05D006127 ORTHO05D007465 9.3e-189 664.1 549 63.4
Sopen03g003570 Solanum pennellii HOM05D006127 ORTHO05D007465 9.3e-189 664.1 463 74.3
Gorai.006G199600 Gossypium raimondii HOM05D006127 ORTHO05D007465 1.6e-188 663.3 548 64.1
Phvul.004G105900 Phaseolus vulgaris HOM05D006127 ORTHO05D007465 2.1e-188 662.9 550 64.0
Actinidia34165 Actinidia chinensis HOM05D006127 ORTHO05D007465 2.7e-188 662.5 558 64.2
Gohir.D09G177600 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.0e-187 660.6 548 63.9
Lalb_Chr01g0009501 Lupinus albus HOM05D006127 ORTHO05D007465 1.0e-187 660.6 524 66.6
Sed0008008 Sechium edule HOM05D006127 ORTHO05D007465 3.0e-187 659.1 550 62.5
Ca_26803_v3 Cicer arietinum L. HOM05D006127 ORTHO05D007465 3.9e-187 658.7 552 63.6
Peaxi162Scf00444g00314 Petunia axillaris HOM05D006127 ORTHO05D007465 5.1e-187 658.3 462 74.9
Nitab4.5_0001331g0020 Nicotiana tabacum HOM05D006127 ORTHO05D007465 8.7e-187 657.5 472 73.1
CAN.G236.3 Capsicum annuum HOM05D006127 ORTHO05D007465 2.5e-186 656.0 462 74.0
Glyma.09G129300 Glycine max HOM05D006127 ORTHO05D007465 4.3e-186 655.2 548 63.9
Sabra04G0047500 Salix brachista HOM05D006127 ORTHO05D007465 9.6e-186 654.1 611 60.7
Thhalv10003967m.g Eutrema salsugineum HOM05D006127 ORTHO05D007465 5.3e-184 648.3 533 64.7
MSTRG.8699 Avicennia marina HOM05D006127 ORTHO05D007465 9.0e-184 647.5 564 60.8
Sp2g25830 Schrenkiella parvula HOM05D006127 ORTHO05D007465 1.2e-183 647.1 549 63.8
AT5G62650 Arabidopsis thaliana HOM05D006127 ORTHO05D007465 2.0e-183 646.4 551 63.5
Carub.0008s2341 Capsella rubella HOM05D006127 ORTHO05D007465 2.6e-183 646.0 547 63.6
Lj1A1007G54 Lonicera japonica HOM05D006127 ORTHO05D007465 1.7e-182 643.3 483 69.8
AL8G39630 Arabidopsis lyrata HOM05D006127 ORTHO05D007465 2.2e-182 642.9 550 63.6
CARHR276460 Cardamine hirsuta HOM05D006127 ORTHO05D007465 1.4e-181 640.2 543 63.2
THA.LOC104818243 Tarenaya hassleriana HOM05D006127 ORTHO05D007465 9.3e-181 637.5 488 68.4
Gohir.A09G182900 Gossypium hirsutum HOM05D006127 ORTHO05D007465 1.6e-180 636.7 530 64.0
BcaC01g02503 Brassica carinata HOM05D006127 ORTHO05D007465 2.7e-180 636.0 540 63.7
BraA06t25889Z Brassica rapa HOM05D006127 ORTHO05D007465 3.5e-180 635.6 540 63.5
Medtr6g053110 Medicago truncatula HOM05D006127 ORTHO05D007465 3.5e-180 635.6 553 63.3
A06p29390 Brassica napus HOM05D006127 ORTHO05D007465 3.9e-179 632.1 540 63.1
BolC3t18667H Brassica oleracea HOM05D006127 ORTHO05D007465 2.5e-178 629.4 540 63.3
Aa31LG11G990 Aethionema arabicum HOM05D006127 ORTHO05D007465 3.3e-178 629.0 540 63.3
HanXRQChr00c0486g0575011 Helianthus annuus HOM05D006127 ORTHO05D007465 4.3e-178 628.6 559 60.3
C03p64120 Brassica napus HOM05D006127 ORTHO05D007465 1.3e-177 627.1 540 63.1
arahy.Tifrunner.gnm1.ann1.HXNP43 Arachis hypogaea HOM05D006127 ORTHO05D007465 6.9e-176 621.3 557 62.3
arahy.Tifrunner.gnm1.ann1.AR9FJK Arachis hypogaea HOM05D006127 ORTHO05D007465 9.0e-176 620.9 561 61.7
Sc13g0009280 Simmondsia chinensis HOM05D006127 ORTHO05D007465 4.5e-175 618.6 488 66.4
Lsat_1_v5_gn_9_56840 Lactuca sativa HOM05D006127 ORTHO05D007465 1.3e-174 617.1 560 60.2
Cc02_g02250 Coffea canephora HOM05D006127 ORTHO05D007465 5.0e-174 615.1 438 71.0
Migut.F00277 Erythranthe guttata HOM05D006127 ORTHO05D007465 8.5e-174 614.4 570 59.5
ECA232G4568 Erigeron canadensis HOM05D006127 ORTHO05D007465 1.9e-173 613.2 472 66.1
DCAR_008898 Daucus carota HOM05D006127 ORTHO05D007465 1.2e-172 610.5 544 59.9
PSO266G0017 Papaver somniferum HOM05D006127 ORTHO05D007465 1.0e-171 607.4 468 65.6
BcaB02g09667 Brassica carinata HOM05D006127 ORTHO05D007465 1.1e-170 604.0 545 61.7
Aqoxy7G00200 Aquilegia oxysepala HOM05D006127 ORTHO05D007465 2.5e-170 602.8 465 67.5
PSO478G4852 Papaver somniferum HOM05D006127 ORTHO05D007465 6.3e-169 598.2 559 58.3
HanXRQChr15g0494171 Helianthus annuus HOM05D006127 ORTHO05D007465 1.5e-167 593.6 525 61.1
Glyma.16G177100 Glycine max HOM05D006127 ORTHO05D007465 2.0e-167 593.2 545 60.7
Nn6g32416 Nelumbo nucifera HOM05D006127 ORTHO05D007465 5.9e-167 591.7 527 61.9
Cpa.g.sc107.127 Carica papaya HOM05D006127 ORTHO05D007465 2.2e-166 589.7 450 69.8
EL10Ac3g05405 Beta vulgaris HOM05D006127 ORTHO05D007465 6.7e-163 578.2 561 59.4
GSVIVG01028824001 Vitis vinifera HOM05D006127 ORTHO05D007465 5.7e-162 575.1 439 67.4
Oeu003330.1 Olea europaea HOM05D006127 ORTHO05D007465 1.4e-160 570.5 420 68.6
unitig_747.g21859 Utricularia gibba HOM05D006127 ORTHO05D007465 2.6e-159 566.2 548 57.8
AUR62031438 Chenopodium quinoa HOM05D006127 ORTHO05D007465 1.7e-158 563.5 463 64.8
FvH4_7g30450 Fragaria vesca HOM05D006127 ORTHO05D007465 2.5e-157 559.7 375 78.1
SGA_v2.0_scaffold60G21123 Striga asiatica HOM05D006127 ORTHO05D007465 2.5e-157 559.7 559 56.2
Hund04798 Selenicereus undatus HOM05D006127 ORTHO05D007465 1.2e-151 540.8 677 49.2
Ah.07g206460 Amaranthus hybridus HOM05D006127 ORTHO05D007465 1.6e-148 530.4 554 56.9
vmacro06616 Vaccinium macrocarpon HOM05D006127 ORTHO05D007465 6.1e-148 528.5 557 55.1
ATR0721G168 Amborella trichopoda HOM05D006127 ORTHO05D007465 5.2e-147 525.4 547 54.8
Rhsim03G0192200 Rhododendron simsii HOM05D006127 ORTHO05D007465 1.7e-145 520.4 551 55.5
CDE04G3725 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 2.9e-142 509.6 510 54.9
Psat0s2186g0040 Pisum sativum HOM05D006127 ORTHO05D007465 1.9e-141 506.9 398 66.6
TPR.G9177 Trifolium pratense HOM05D006127 ORTHO05D007465 4.7e-140 502.3 336 75.3
Zm00001eb119480 Zea mays HOM05D006127 ORTHO05D007465 4.0e-139 499.2 483 56.3
Ah.13g069260 Amaranthus hybridus HOM05D006127 ORTHO05D007465 3.4e-138 496.1 416 63.7
AUR62021102 Chenopodium quinoa HOM05D006127 ORTHO05D007465 6.3e-137 491.9 463 59.4
HPP92_008801 Vanilla planifolia HOM05D006127 ORTHO05D007465 5.0e-134 482.3 524 51.0
BcaB02g09671 Brassica carinata HOM05D006127 ORTHO05D007465 4.1e-112 409.5 465 53.1
Oeu027861.1 Olea europaea HOM05D006127 ORTHO05D007465 1.6e-111 407.5 432 54.2
VMungo0464G0768 Vigna mungo HOM05D006127 ORTHO05D007465 3.1e-107 393.3 320 65.3
Nn1g01683 Nelumbo nucifera HOM05D006127 ORTHO05D007465 2.2e-105 387.1 553 44.7
HPP92_005266 Vanilla planifolia HOM05D006127 ORTHO05D007465 3.5e-103 379.8 376 55.1
SGA_v2.0_scaffold192G40622 Striga asiatica HOM05D006127 ORTHO05D007465 3.6e-92 343.2 259 68.0
FAN01G1207 Fragaria x ananassa HOM05D006127 ORTHO05D007465 1.5e-90 337.8 252 72.6
CDE03G0317 Ceratophyllum demersum HOM05D006127 ORTHO05D007465 3.8e-89 333.2 284 57.7
Mapoly0009s0032 Marchantia polymorpha HOM05D006127 ORTHO05D007465 3.8e-73 280.0 472 38.1
AagrBONN_evm.TU.Sc2ySwM_368.2100 Anthoceros agrestis HOM05D006127 ORTHO05D007465 7.4e-69 265.8 505 36.8
Os01g0225300 Oryza sativa ssp. japonica HOM05D006127 ORTHO05D007465 1.3e-68 265.0 295 51.5
Pp3c17_22580 Physcomitrium patens HOM05D006127 ORTHO05D007465 1.5e-58 231.5 534 32.0
arahy.Tifrunner.gnm1.ann1.KML1I1 Arachis hypogaea HOM05D006127 ORTHO05D007465 1.6e-47 194.9 247 47.4
Cfa002216 Carpinus fangiana HOM05D006127 ORTHO05D007465 7.0e-43 179.5 240 47.9
SEGI_03634 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 2.2e-36 157.9 120 60.8
TPR.G27774 Trifolium pratense HOM05D006127 ORTHO05D007465 9.1e-35 152.5 173 50.9
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-33 148.3 95 75.8
SMO266G0103 Selaginella moellendorffii HOM05D006127 ORTHO05D007465 5.0e-33 146.7 192 37.5
TPR.G9175 Trifolium pratense HOM05D006127 ORTHO05D007465 6.5e-25 119.8 80 68.8
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 2.5e-24 117.9 62 85.5
Ah.13g069250 Amaranthus hybridus HOM05D006127 ORTHO05D007465 3.3e-16 90.9 149 47.7
SEGI_25179 Sequoiadendron giganteum HOM05D006127 ORTHO05D007465 3.3e-16 90.9 83 55.4
Aqoxy1G04253 Aquilegia oxysepala HOM05D006127 ORTHO05D078839 3.1e-06 57.8 49 61.2


User provided reference genes

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