Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 8.5e-296 1019.6 527 100.0
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 4.9e-211 738.0 527 74.0
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 2.0e-204 716.1 527 71.9
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.2e-166 589.7 530 59.8
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 2.4e-165 586.3 533 61.9
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 5.4e-165 585.1 533 61.7
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 5.9e-164 581.6 535 60.4
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 7.2e-162 574.7 559 58.1
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 2.8e-161 572.8 541 59.9
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 3.6e-161 572.4 538 58.0
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 8.9e-160 567.8 534 57.1
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 2.0e-159 566.6 556 56.3
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 5.7e-159 565.1 544 59.2
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 7.5e-159 564.7 544 58.8
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.8e-159 564.3 548 58.9
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 9.8e-159 564.3 544 59.0
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 2.2e-158 563.1 546 58.2
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 4.9e-158 562.0 530 59.1
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 8.3e-158 561.2 537 57.4
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.4e-157 560.5 539 58.6
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 1.8e-157 560.1 547 57.8
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 3.2e-157 559.3 538 57.6
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 2.9e-155 552.7 535 58.1
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 8.6e-155 551.2 562 56.9
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 9.5e-154 547.7 535 57.8
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 6.1e-153 545.0 535 57.4
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 3.4e-151 539.3 536 56.5
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 4.4e-151 538.9 536 54.1
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 5.8e-151 538.5 549 54.6
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 1.7e-150 537.0 536 55.6
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 2.3e-147 526.6 532 55.1
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 1.1e-146 524.2 534 54.5
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 3.1e-144 516.2 514 54.7
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 3.4e-143 512.7 535 55.3
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 9.2e-141 504.6 522 55.6
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 8.6e-139 498.0 531 52.7
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 1.1e-138 497.7 528 53.6
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 1.1e-138 497.7 535 52.3
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 3.3e-138 496.1 535 51.4
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 2.1e-137 493.4 533 52.3
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 2.8e-137 493.0 532 52.3
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 1.1e-136 491.1 540 50.0
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 8.9e-136 488.0 568 50.2
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 2.9e-134 483.0 551 49.7
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 9.2e-133 478.0 533 49.0
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 1.3e-131 474.2 529 52.2
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 2.3e-131 473.4 539 49.0
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 6.6e-131 471.9 540 50.9
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 8.6e-131 471.5 535 50.8
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 1.1e-130 471.1 538 50.7
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 1.5e-130 470.7 535 52.1
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 3.3e-130 469.5 613 45.2
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 4.3e-130 469.2 537 49.0
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 7.3e-130 468.4 537 50.5
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 2.8e-129 466.5 536 50.0
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 4.7e-129 465.7 538 48.3
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 4.7e-129 465.7 533 49.7
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 8.1e-129 464.9 536 50.0
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 8.1e-129 464.9 554 49.3
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 2.2e-126 456.8 537 49.0
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.4e-125 454.1 536 48.1
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.2e-124 451.1 535 47.1
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 1.2e-124 451.1 538 48.1
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 2.7e-124 449.9 537 47.1
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 2.7e-124 449.9 537 48.2
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 1.0e-123 448.0 536 47.0
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 1.3e-123 447.6 532 49.4
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.1e-123 445.7 537 47.7
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 7.3e-122 441.8 445 55.1
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 9.6e-122 441.4 538 48.0
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 9.6e-122 441.4 538 48.0
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 1.6e-121 440.7 536 47.4
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 2.1e-121 440.3 538 47.8
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 6.2e-121 438.7 508 50.6
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 1.1e-120 438.0 533 48.6
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 1.4e-120 437.6 484 52.5
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 3.1e-120 436.4 537 46.6
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 9.0e-120 434.9 683 43.6
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 2.0e-119 433.7 537 46.2
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 9.9e-119 431.4 534 49.1
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 1.7e-118 430.6 535 47.5
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 2.2e-118 430.3 538 47.2
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 3.8e-118 429.5 535 47.3
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 7.1e-117 425.2 558 45.9
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 9.3e-117 424.9 533 46.7
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 3.5e-116 422.9 552 46.2
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 3.9e-115 419.5 535 46.4
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 3.9e-115 419.5 440 53.0
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 1.1e-114 417.9 535 46.4
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 5.6e-114 415.6 528 44.9
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 2.8e-113 413.3 540 46.1
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 1.8e-112 410.6 531 44.8
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 5.3e-112 409.1 547 45.3
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 3.4e-111 406.4 541 44.2
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 6.4e-110 402.1 535 45.4
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 8.4e-110 401.7 542 47.0
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.4e-109 401.0 543 47.1
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 1.4e-109 401.0 541 46.2
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 2.3e-107 393.7 537 46.6
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 1.9e-106 390.6 416 52.2
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 1.6e-105 387.5 514 45.5
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 2.8e-105 386.7 536 43.8
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 4.2e-101 372.9 533 43.2
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 6.0e-100 369.0 280 70.7
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 8.7e-99 365.2 542 42.6
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 3.3e-98 363.2 396 50.5
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 3.7e-97 359.8 538 42.0
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 6.2e-97 359.0 554 42.6
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 1.1e-96 358.2 394 49.5
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 2.3e-91 340.5 526 41.4
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 6.9e-88 328.9 547 39.5
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 9.0e-88 328.6 469 44.1
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 1.4e-85 321.2 536 39.2
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 2.7e-84 317.0 534 38.2
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 3.6e-84 316.6 400 47.5
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 9.7e-82 308.5 555 36.0
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 1.7e-81 307.8 336 48.5
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 4.1e-80 303.1 563 35.9
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 4.5e-79 299.7 559 36.5
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 8.8e-75 285.4 306 55.2
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.5e-74 284.6 350 48.0
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 5.5e-69 266.2 393 42.2
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 6.5e-62 242.7 268 51.9
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 5.7e-58 229.6 493 35.3
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 2.2e-54 217.6 344 39.8
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 3.8e-54 216.9 225 51.1
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 2.3e-51 207.6 445 35.3
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 6.8e-51 206.1 275 43.3
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 6.8e-43 179.5 368 36.7
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 3.1e-35 154.1 198 44.4
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 6.8e-35 152.9 142 58.5
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 7.0e-32 142.9 157 47.1
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 1.6e-31 141.7 157 47.8
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 6.0e-31 139.8 219 40.2
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 3.0e-30 137.5 152 47.4
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 8.6e-30 136.0 155 47.7
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 8.6e-30 136.0 336 33.0
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 1.2e-28 132.1 171 45.0
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 1.8e-27 128.3 667 23.5
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 5.2e-27 126.7 250 38.0
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 4.4e-26 123.6 181 38.7
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 2.9e-25 120.9 487 24.8
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 1.2e-23 115.5 144 45.1
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 5.2e-19 100.1 194 33.0
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 1.0e-14 85.9 136 41.2
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 3.3e-13 80.9 172 31.4
AL5G14400 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 6.2e-12 76.6 280 27.5
TWI39G1179 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 7.8e-07 59.7 109 38.5
CAN.G432.4 Capsicum annuum HOM05D002050 ORTHO05D001949 1.3e-06 58.9 65 53.8
arahy.Tifrunner.gnm1.ann1.X2DDWJ Arachis hypogaea HOM05D001074 ORTHO05D038832 3.0e-06 57.8 84 42.9


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